Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV13-2A0A0B4J235 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAV13-2A0A0B4J235 AC018358.1-201ENST00000631079 1402 ntBASIC16.27■□□□□ 0.19
TRAV13-2A0A0B4J235 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV13-2A0A0B4J235 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV13-2A0A0B4J235 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV13-2A0A0B4J235 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAV13-2A0A0B4J235 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV13-2A0A0B4J235 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV13-2A0A0B4J235 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAV13-2A0A0B4J235 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV13-2A0A0B4J235 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV13-2A0A0B4J235 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV13-2A0A0B4J235 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV13-2A0A0B4J235 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TRAV13-2A0A0B4J235 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV13-2A0A0B4J235 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV13-2A0A0B4J235 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV13-2A0A0B4J235 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRAV13-2A0A0B4J235 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.24■□□□□ 0.19
TRAV13-2A0A0B4J235 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV13-2A0A0B4J235 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV13-2A0A0B4J235 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV13-2A0A0B4J235 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-2A0A0B4J235 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV13-2A0A0B4J235 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-2A0A0B4J235 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-2A0A0B4J235 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-2A0A0B4J235 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV13-2A0A0B4J235 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV13-2A0A0B4J235 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV13-2A0A0B4J235 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV13-2A0A0B4J235 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-2A0A0B4J235 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV13-2A0A0B4J235 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV13-2A0A0B4J235 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV13-2A0A0B4J235 ERN1-208ENST00000606895 2068 ntBASIC16.22■□□□□ 0.19
TRAV13-2A0A0B4J235 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV13-2A0A0B4J235 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV13-2A0A0B4J235 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV13-2A0A0B4J235 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV13-2A0A0B4J235 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV13-2A0A0B4J235 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV13-2A0A0B4J235 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV13-2A0A0B4J235 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV13-2A0A0B4J235 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV13-2A0A0B4J235 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV13-2A0A0B4J235 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV13-2A0A0B4J235 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV13-2A0A0B4J235 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV13-2A0A0B4J235 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV13-2A0A0B4J235 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-2A0A0B4J235 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-2A0A0B4J235 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-2A0A0B4J235 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV13-2A0A0B4J235 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-2A0A0B4J235 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV13-2A0A0B4J235 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV13-2A0A0B4J235 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-2A0A0B4J235 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV13-2A0A0B4J235 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-2A0A0B4J235 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV13-2A0A0B4J235 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV13-2A0A0B4J235 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-2A0A0B4J235 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-2A0A0B4J235 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-2A0A0B4J235 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV13-2A0A0B4J235 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-2A0A0B4J235 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-2A0A0B4J235 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-2A0A0B4J235 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-2A0A0B4J235 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV13-2A0A0B4J235 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV13-2A0A0B4J235 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV13-2A0A0B4J235 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV13-2A0A0B4J235 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-2A0A0B4J235 AL031258.1-201ENST00000623562 325 ntBASIC16.17■□□□□ 0.18
TRAV13-2A0A0B4J235 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-2A0A0B4J235 AC142381.3-201ENST00000568208 1670 ntBASIC16.17■□□□□ 0.18
TRAV13-2A0A0B4J235 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-2A0A0B4J235 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-2A0A0B4J235 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-2A0A0B4J235 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-2A0A0B4J235 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-2A0A0B4J235 AC012676.1-201ENST00000574705 1949 ntBASIC16.16■□□□□ 0.18
TRAV13-2A0A0B4J235 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRAV13-2A0A0B4J235 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-2A0A0B4J235 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-2A0A0B4J235 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-2A0A0B4J235 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-2A0A0B4J235 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV13-2A0A0B4J235 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV13-2A0A0B4J235 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV13-2A0A0B4J235 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-2A0A0B4J235 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-2A0A0B4J235 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV13-2A0A0B4J235 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-2A0A0B4J235 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-2A0A0B4J235 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV13-2A0A0B4J235 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms