Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV18A0A075B6X5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV18A0A075B6X5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV18A0A075B6X5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.15■□□□□ 0.98
TRAV18A0A075B6X5 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV18A0A075B6X5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.15■□□□□ 0.98
TRAV18A0A075B6X5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV18A0A075B6X5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV18A0A075B6X5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV18A0A075B6X5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRAV18A0A075B6X5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.13■□□□□ 0.97
TRAV18A0A075B6X5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV18A0A075B6X5 MIR762-201ENST00000390236 83 ntBASIC21.13■□□□□ 0.97
TRAV18A0A075B6X5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV18A0A075B6X5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV18A0A075B6X5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV18A0A075B6X5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TRAV18A0A075B6X5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV18A0A075B6X5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV18A0A075B6X5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV18A0A075B6X5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV18A0A075B6X5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV18A0A075B6X5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.12■□□□□ 0.97
TRAV18A0A075B6X5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRAV18A0A075B6X5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV18A0A075B6X5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
TRAV18A0A075B6X5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV18A0A075B6X5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV18A0A075B6X5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV18A0A075B6X5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.1■□□□□ 0.97
TRAV18A0A075B6X5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRAV18A0A075B6X5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV18A0A075B6X5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV18A0A075B6X5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV18A0A075B6X5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAV18A0A075B6X5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRAV18A0A075B6X5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV18A0A075B6X5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.09■□□□□ 0.97
TRAV18A0A075B6X5 LINC00273-201ENST00000539813 1452 ntBASIC21.08■□□□□ 0.97
TRAV18A0A075B6X5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV18A0A075B6X5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TRAV18A0A075B6X5 AC136428.2-201ENST00000563187 214 ntBASIC21.08■□□□□ 0.97
TRAV18A0A075B6X5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAV18A0A075B6X5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV18A0A075B6X5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.07■□□□□ 0.96
TRAV18A0A075B6X5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV18A0A075B6X5 AC097358.2-201ENST00000607541 1159 ntBASIC21.07■□□□□ 0.96
TRAV18A0A075B6X5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV18A0A075B6X5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV18A0A075B6X5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV18A0A075B6X5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV18A0A075B6X5 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.06■□□□□ 0.96
TRAV18A0A075B6X5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV18A0A075B6X5 AC142472.1-201ENST00000612013 1741 ntBASIC21.06■□□□□ 0.96
TRAV18A0A075B6X5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV18A0A075B6X5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV18A0A075B6X5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.06■□□□□ 0.96
TRAV18A0A075B6X5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV18A0A075B6X5 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.05■□□□□ 0.96
TRAV18A0A075B6X5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRAV18A0A075B6X5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TRAV18A0A075B6X5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV18A0A075B6X5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV18A0A075B6X5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV18A0A075B6X5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV18A0A075B6X5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV18A0A075B6X5 ERN1-208ENST00000606895 2068 ntBASIC21.03■□□□□ 0.96
TRAV18A0A075B6X5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TRAV18A0A075B6X5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV18A0A075B6X5 AC108673.1-201ENST00000510422 1159 ntBASIC21.03■□□□□ 0.96
TRAV18A0A075B6X5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV18A0A075B6X5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV18A0A075B6X5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAV18A0A075B6X5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAV18A0A075B6X5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV18A0A075B6X5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAV18A0A075B6X5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.02■□□□□ 0.96
TRAV18A0A075B6X5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV18A0A075B6X5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV18A0A075B6X5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV18A0A075B6X5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV18A0A075B6X5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV18A0A075B6X5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV18A0A075B6X5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRAV18A0A075B6X5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV18A0A075B6X5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV18A0A075B6X5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV18A0A075B6X5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV18A0A075B6X5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21■□□□□ 0.95
TRAV18A0A075B6X5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21■□□□□ 0.95
TRAV18A0A075B6X5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21■□□□□ 0.95
TRAV18A0A075B6X5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV18A0A075B6X5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV18A0A075B6X5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TRAV18A0A075B6X5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV18A0A075B6X5 MIR6090-201ENST00000622481 60 ntBASIC20.98■□□□□ 0.95
TRAV18A0A075B6X5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV18A0A075B6X5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV18A0A075B6X5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAV18A0A075B6X5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms