Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.611e-6■□□□□ 10.5
SRSF1Q07955 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.3■□□□□ 0.21e-6■□□□□ 10.5
SRSF1Q07955 CCS-205ENST00000530384 1196 ntTSL 515.85■□□□□ 0.131e-6■□□□□ 10.5
SRSF1Q07955 CCS-206ENST00000530961 1214 ntTSL 514.67□□□□□ -0.061e-6■□□□□ 10.5
SRSF1Q07955 CCNL2-212ENST00000480646 614 ntTSL 312.32□□□□□ -0.445e-7■□□□□ 10.5
SRSF1Q07955 NAP1L1-222ENST00000551992 1074 ntTSL 522.55■■□□□ 1.24e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-214ENST00000548273 818 ntTSL 312.78□□□□□ -0.364e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC12.53□□□□□ -0.44e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.424e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC11.28□□□□□ -0.64e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.724e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-209ENST00000547704 760 ntTSL 510.42□□□□□ -0.744e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-221ENST00000551600 786 ntTSL 510.42□□□□□ -0.744e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC10.32□□□□□ -0.764e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC9.74□□□□□ -0.854e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC9.72□□□□□ -0.854e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC8.45□□□□□ -1.064e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC8.07□□□□□ -1.124e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.4□□□□□ -1.384e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.554e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-218ENST00000550934 851 ntTSL 54.78□□□□□ -1.644e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-225ENST00000552147 1009 ntTSL 54.78□□□□□ -1.644e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-208ENST00000547529 892 ntTSL 54.57□□□□□ -1.684e-11■□□□□ 10.5
SRSF1Q07955 NAP1L1-224ENST00000552056 1981 ntTSL 53.82□□□□□ -1.84e-11■□□□□ 10.5
SRSF1Q07955 TRMT2A-220ENST00000494820 1098 ntTSL 515.5■□□□□ 0.072e-8■□□□□ 10.5
SRSF1Q07955 KMT2D-203ENST00000547610 636 ntTSL 520.31■□□□□ 0.842e-7■□□□□ 10.5
SRSF1Q07955 HMG20B-201ENST00000262949 886 ntTSL 522.28■■□□□ 1.167e-7■□□□□ 10.5
SRSF1Q07955 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.017e-7■□□□□ 10.5
SRSF1Q07955 HMG20B-203ENST00000416526 711 ntTSL 320.62■□□□□ 0.897e-7■□□□□ 10.5
SRSF1Q07955 HMG20B-213ENST00000488973 2434 ntTSL 1 (best)15.07■□□□□ 07e-7■□□□□ 10.5
SRSF1Q07955 HNRNPH1-243ENST00000522958 580 ntTSL 213.44□□□□□ -0.266e-13■□□□□ 10.5
SRSF1Q07955 HNRNPH1-241ENST00000521790 549 ntTSL 26.14□□□□□ -1.436e-13■□□□□ 10.5
SRSF1Q07955 HNRNPH1-235ENST00000519943 748 ntTSL 23.57□□□□□ -1.846e-13■□□□□ 10.5
SRSF1Q07955 CAPN15-207ENST00000568988 911 ntTSL 326.14■■□□□ 1.782e-8■□□□□ 10.5
SRSF1Q07955 CAPN15-202ENST00000562370 942 ntTSL 226.14■■□□□ 1.782e-8■□□□□ 10.5
SRSF1Q07955 CEP250-205ENST00000425096 629 ntTSL 315.34■□□□□ 0.052e-8■□□□□ 10.5
SRSF1Q07955 CAPN15-205ENST00000567216 3174 ntTSL 1 (best)14.97□□□□□ -0.012e-8■□□□□ 10.5
SRSF1Q07955 CTTN-213ENST00000529736 952 ntTSL 314.46□□□□□ -0.097e-11■□□□□ 10.5
SRSF1Q07955 CTTN-215ENST00000533931 567 ntTSL 313.79□□□□□ -0.27e-11■□□□□ 10.5
SRSF1Q07955 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.232e-8■□□□□ 10.5
SRSF1Q07955 AFDN-215ENST00000497596 728 ntTSL 28.39□□□□□ -1.074e-10■□□□□ 10.5
SRSF1Q07955 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.188e-9■□□□□ 10.5
SRSF1Q07955 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.96■□□□□ 0.631e-7■□□□□ 10.5
SRSF1Q07955 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.01■□□□□ 0.311e-7■□□□□ 10.5
SRSF1Q07955 GLYCTK-206ENST00000473583 1021 ntTSL 1 (best)15.87■□□□□ 0.131e-7■□□□□ 10.5
SRSF1Q07955 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.061e-7■□□□□ 10.5
SRSF1Q07955 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.11■□□□□ 0.011e-7■□□□□ 10.5
SRSF1Q07955 GLYCTK-208ENST00000486393 2019 ntTSL 1 (best)14.75□□□□□ -0.051e-7■□□□□ 10.5
SRSF1Q07955 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.4□□□□□ -0.11e-7■□□□□ 10.5
SRSF1Q07955 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC13.73□□□□□ -0.211e-7■□□□□ 10.5
SRSF1Q07955 GLYCTK-209ENST00000489173 2083 ntTSL 512.84□□□□□ -0.351e-7■□□□□ 10.5
SRSF1Q07955 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.387e-7■□□□□ 10.5
SRSF1Q07955 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.87■□□□□ 0.934e-12■□□□□ 10.5
SRSF1Q07955 SF1-221ENST00000633899 591 ntTSL 419.25■□□□□ 0.674e-12■□□□□ 10.5
SRSF1Q07955 SF1-212ENST00000463343 983 ntTSL 216.94■□□□□ 0.34e-7■□□□□ 10.5
SRSF1Q07955 SF1-207ENST00000413951 623 ntTSL 216.23■□□□□ 0.194e-12■□□□□ 10.5
SRSF1Q07955 SF1-215ENST00000482693 755 ntTSL 215.14■□□□□ 0.014e-12■□□□□ 10.5
SRSF1Q07955 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.214e-12■□□□□ 10.5
SRSF1Q07955 SF1-211ENST00000448404 2778 ntTSL 1 (best)11.33□□□□□ -0.64e-12■□□□□ 10.5
SRSF1Q07955 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.674e-12■□□□□ 10.5
SRSF1Q07955 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC10.65□□□□□ -0.74e-12■□□□□ 10.5
SRSF1Q07955 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC10.57□□□□□ -0.724e-12■□□□□ 10.5
SRSF1Q07955 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.94e-12■□□□□ 10.5
SRSF1Q07955 NARS-204ENST00000586807 1608 ntTSL 29.13□□□□□ -0.953e-6■□□□□ 10.5
SRSF1Q07955 NARS-201ENST00000256854 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.983e-6■□□□□ 10.5
SRSF1Q07955 NARS-210ENST00000589314 1036 ntTSL 57.07□□□□□ -1.283e-6■□□□□ 10.5
SRSF1Q07955 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.094e-7■□□□□ 10.5
SRSF1Q07955 RABGGTB-208ENST00000471759 2137 ntTSL 25.7□□□□□ -1.54e-7■□□□□ 10.5
SRSF1Q07955 RABGGTB-209ENST00000473406 721 ntTSL 55.61□□□□□ -1.514e-7■□□□□ 10.5
SRSF1Q07955 RABGGTB-212ENST00000491266 961 ntTSL 35.32□□□□□ -1.564e-7■□□□□ 10.5
SRSF1Q07955 RABGGTB-204ENST00000461653 1702 ntTSL 54.91□□□□□ -1.624e-7■□□□□ 10.5
SRSF1Q07955 RABGGTB-210ENST00000485459 788 ntTSL 54.81□□□□□ -1.644e-7■□□□□ 10.5
SRSF1Q07955 RABGGTB-206ENST00000467748 468 ntTSL 34.66□□□□□ -1.664e-7■□□□□ 10.5
SRSF1Q07955 RABGGTB-207ENST00000470201 848 ntTSL 34.66□□□□□ -1.664e-7■□□□□ 10.5
SRSF1Q07955 RABGGTB-213ENST00000496055 3863 ntTSL 24.11□□□□□ -1.754e-7■□□□□ 10.5
SRSF1Q07955 RABGGTB-211ENST00000489450 586 ntTSL 53.49□□□□□ -1.854e-7■□□□□ 10.5
SRSF1Q07955 RCN3-204ENST00000597801 549 ntTSL 518.32■□□□□ 0.529e-7■□□□□ 10.4
SRSF1Q07955 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.259e-7■□□□□ 10.4
SRSF1Q07955 RCN3-205ENST00000598833 607 ntTSL 315.57■□□□□ 0.089e-7■□□□□ 10.4
SRSF1Q07955 RCN3-203ENST00000593644 223 ntTSL 313□□□□□ -0.339e-7■□□□□ 10.4
SRSF1Q07955 COL18A1-201ENST00000342220 3386 ntTSL 210.45□□□□□ -0.742e-8■□□□□ 10.4
SRSF1Q07955 EXOC3L4-206ENST00000560304 657 ntTSL 318.97■□□□□ 0.635e-7■□□□□ 10.4
SRSF1Q07955 ARPC4-TTLL3-202ENST00000418163 551 ntTSL 411.26□□□□□ -0.612e-9■□□□□ 10.4
SRSF1Q07955 KPNB1-205ENST00000577918 859 ntTSL 314.44□□□□□ -0.11e-6■□□□□ 10.4
SRSF1Q07955 KPNB1-214ENST00000583648 896 ntTSL 413.92□□□□□ -0.181e-6■□□□□ 10.4
SRSF1Q07955 UFD1-204ENST00000447868 596 ntTSL 323.16■■□□□ 1.31e-8■□□□□ 10.4
SRSF1Q07955 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.671e-8■□□□□ 10.4
SRSF1Q07955 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.79■□□□□ 0.61e-8■□□□□ 10.4
SRSF1Q07955 UFD1-205ENST00000459854 5038 ntTSL 1 (best)8.23□□□□□ -1.091e-8■□□□□ 10.4
SRSF1Q07955 UFD1-206ENST00000466373 3059 ntTSL 27.84□□□□□ -1.151e-8■□□□□ 10.4
SRSF1Q07955 SUPT6H-203ENST00000577713 505 ntTSL 54.35□□□□□ -1.711e-9■□□□□ 10.4
SRSF1Q07955 PANK2-204ENST00000471830 622 ntTSL 36.88□□□□□ -1.313e-8■□□□□ 10.4
SRSF1Q07955 PRRC2B-205ENST00000451855 1762 ntTSL 518.7■□□□□ 0.582e-8■□□□□ 10.4
SRSF1Q07955 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.523e-7■□□□□ 10.4
SRSF1Q07955 WDR59-222ENST00000570070 565 ntTSL 410.3□□□□□ -0.763e-7■□□□□ 10.4
SRSF1Q07955 WDR59-212ENST00000566924 569 ntTSL 49.22□□□□□ -0.933e-7■□□□□ 10.4
SRSF1Q07955 WDR59-217ENST00000569229 901 ntTSL 59.05□□□□□ -0.963e-7■□□□□ 10.4
SRSF1Q07955 WDR59-223ENST00000616369 1953 ntTSL 1 (best) BASIC8.72□□□□□ -1.013e-7■□□□□ 10.4
SRSF1Q07955 LUC7L3-205ENST00000504065 1071 ntTSL 55.59□□□□□ -1.518e-8■□□□□ 10.4
SRSF1Q07955 ZFC3H1-207ENST00000549407 852 ntTSL 318.83■□□□□ 0.62e-9■□□□□ 10.4
Retrieved 100 of 14,836 protein–RNA pairs in 374.2 ms