RNA–Protein interactions for RNA: ENST00000494820.5

TRMT2A-220, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 5

Gene TRMT2A, Length 1,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-220ENST00000494820 NISCHQ9Y2I1 1504 aa39.19■■■■□ 3.86
TRMT2A-220ENST00000494820 ABCC9O60706 1549 aa35.4■■■■□ 3.26
TRMT2A-220ENST00000494820 CCDC180Q9P1Z9 1646 aa35.06■■■■□ 3.2
TRMT2A-220ENST00000494820 RB1CC1Q8TDY2 1594 aa33.52■■■□□ 2.96
TRMT2A-220ENST00000494820 DNAJC5BQ9UF47 199 aa33.5■■■□□ 2.95
TRMT2A-220ENST00000494820 NACADO15069 1562 aa33.29■■■□□ 2.92
TRMT2A-220ENST00000494820 DCAF8L2P0C7V8 631 aa33.2■■■□□ 2.91
TRMT2A-220ENST00000494820 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.887e-7■■■■□ 25.6
TRMT2A-220ENST00000494820 MYO15BQ96JP2 1530 aa32.82■■■□□ 2.85
TRMT2A-220ENST00000494820 BICRAQ9NZM4 1560 aa32.62■■■□□ 2.81
TRMT2A-220ENST00000494820 UNC13AQ9UPW8 1703 aa32.6■■■□□ 2.81
TRMT2A-220ENST00000494820 ZCCHC6Q5VYS8 1495 aaKnown RBP32.44■■■□□ 2.78
TRMT2A-220ENST00000494820 DCAF1Q9Y4B6 1507 aa32.34■■■□□ 2.77
TRMT2A-220ENST00000494820 SHROOM4Q9ULL8 1493 aa32.14■■■□□ 2.74
TRMT2A-220ENST00000494820 SCRIBQ14160 1630 aa32.01■■■□□ 2.72
TRMT2A-220ENST00000494820 CECR2Q9BXF3 1484 aa31.91■■■□□ 2.7
TRMT2A-220ENST00000494820 CC2D2AQ9P2K1 1620 aa31.89■■■□□ 2.7
TRMT2A-220ENST00000494820 EIF4G1Q04637 1599 aaKnown RBP31.81■■■□□ 2.68
TRMT2A-220ENST00000494820 NCAPD3P42695 1498 aa30.83■■■□□ 2.53
TRMT2A-220ENST00000494820 DNAJC5Q9H3Z4 198 aa30.82■■■□□ 2.52
TRMT2A-220ENST00000494820 ATAD2BQ9ULI0 1458 aa30.71■■■□□ 2.51
TRMT2A-220ENST00000494820 CUX2O14529 1486 aa30.54■■■□□ 2.48
TRMT2A-220ENST00000494820 ERCC6Q03468 1493 aa30.53■■■□□ 2.48
TRMT2A-220ENST00000494820 SMARCA4P51532 1647 aa30.53■■■□□ 2.48
TRMT2A-220ENST00000494820 SMARCA2P51531 1590 aa30.52■■■□□ 2.48
TRMT2A-220ENST00000494820 HMGXB3Q12766 1538 aa30.49■■■□□ 2.47
TRMT2A-220ENST00000494820 NESP48681 1621 aa30.38■■■□□ 2.45
TRMT2A-220ENST00000494820 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
TRMT2A-220ENST00000494820 BAZ1BQ9UIG0 1483 aaKnown RBP30.34■■■□□ 2.45
TRMT2A-220ENST00000494820 PEG3Q9GZU2 1588 aa30.27■■■□□ 2.44
TRMT2A-220ENST00000494820 MROH2BQ7Z745 1585 aa30.21■■■□□ 2.43
TRMT2A-220ENST00000494820 LAMC3Q9Y6N6 1575 aa30.04■■■□□ 2.4
TRMT2A-220ENST00000494820 THOC2Q8NI27 1593 aaKnown RBP30■■■□□ 2.39
TRMT2A-220ENST00000494820 PDS5BQ9NTI5 1447 aa29.96■■■□□ 2.39
TRMT2A-220ENST00000494820 CADPSQ9ULU8 1353 aa29.9■■■□□ 2.38
TRMT2A-220ENST00000494820 KIF21AQ7Z4S6 1674 aa29.79■■■□□ 2.36
TRMT2A-220ENST00000494820 WIZO95785 1651 aa29.74■■■□□ 2.35
TRMT2A-220ENST00000494820 MRC2Q9UBG0 1479 aa29.69■■■□□ 2.34
TRMT2A-220ENST00000494820 WDR62O43379 1518 aa29.61■■■□□ 2.33
TRMT2A-220ENST00000494820 RSF1Q96T23 1441 aaPredicted RBP29.58■■■□□ 2.33
TRMT2A-220ENST00000494820 CEP164Q9UPV0 1460 aa29.52■■■□□ 2.32
TRMT2A-220ENST00000494820 CFTRP13569 1480 aa29.51■■■□□ 2.31
TRMT2A-220ENST00000494820 FANCD2Q9BXW9 1451 aa29.51■■■□□ 2.31
TRMT2A-220ENST00000494820 TOP2AP11388 1531 aaKnown RBP29.4■■■□□ 2.3
TRMT2A-220ENST00000494820 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
TRMT2A-220ENST00000494820 URB2Q14146 1524 aaKnown RBP29.29■■■□□ 2.28
TRMT2A-220ENST00000494820 OSCARQ8IYS5 282 aa29.19■■■□□ 2.26
TRMT2A-220ENST00000494820 CCDC88BA6NC98 1476 aa29.14■■■□□ 2.26
TRMT2A-220ENST00000494820 ZNF608Q9ULD9 1512 aaPredicted RBP28.98■■■□□ 2.23
TRMT2A-220ENST00000494820 IFT140Q96RY7 1462 aa28.97■■■□□ 2.23
TRMT2A-220ENST00000494820 TOPBP1Q92547 1522 aa28.93■■■□□ 2.22
TRMT2A-220ENST00000494820 PRDM2Q13029 1718 aa28.86■■■□□ 2.21
TRMT2A-220ENST00000494820 ABCC8Q09428 1581 aa28.81■■■□□ 2.2
TRMT2A-220ENST00000494820 DNMBPQ6XZF7 1577 aa28.75■■■□□ 2.19
TRMT2A-220ENST00000494820 AQRO60306 1485 aaKnown RBP eCLIP28.71■■■□□ 2.193e-7■■■■□ 21
TRMT2A-220ENST00000494820 RIMBP3CA6NJZ7 1639 aa28.7■■■□□ 2.19
TRMT2A-220ENST00000494820 RIMBP3BA6NNM3 1639 aa28.7■■■□□ 2.19
TRMT2A-220ENST00000494820 RIMBP3Q9UFD9 1639 aa28.7■■■□□ 2.19
TRMT2A-220ENST00000494820 EIF4G3O43432 1585 aaKnown RBP28.68■■■□□ 2.18
TRMT2A-220ENST00000494820 ARHGEF11O15085 1522 aa28.66■■■□□ 2.18
TRMT2A-220ENST00000494820 POLA1P09884 1462 aaPredicted RBP28.65■■■□□ 2.18
TRMT2A-220ENST00000494820 TARBP1Q13395 1621 aaKnown RBP28.64■■■□□ 2.18
TRMT2A-220ENST00000494820 RAD54L2Q9Y4B4 1467 aa28.57■■■□□ 2.16
TRMT2A-220ENST00000494820 FBLN2P98095 1184 aa28.54■■■□□ 2.16
TRMT2A-220ENST00000494820 CYB5RLQ6IPT4 315 aa28.54■■■□□ 2.16
TRMT2A-220ENST00000494820 SOGA1O94964 1423 aa28.52■■■□□ 2.16
TRMT2A-220ENST00000494820 TDRD9Q8NDG6 1382 aaKnown RBP28.52■■■□□ 2.16
TRMT2A-220ENST00000494820 FGD5Q6ZNL6 1462 aa28.42■■■□□ 2.14
TRMT2A-220ENST00000494820 ARAP1Q96P48 1450 aa28.4■■■□□ 2.14
TRMT2A-220ENST00000494820 CHD1O14646 1710 aa28.4■■■□□ 2.14
TRMT2A-220ENST00000494820 CUX1P39880 1505 aa28.38■■■□□ 2.13
TRMT2A-220ENST00000494820 SNAPC4Q5SXM2 1469 aa28.36■■■□□ 2.13
TRMT2A-220ENST00000494820 CHMP7Q8WUX9 453 aaPredicted RBP28.31■■■□□ 2.12
TRMT2A-220ENST00000494820 WDR97A6NE52 1622 aa28.27■■■□□ 2.12
TRMT2A-220ENST00000494820 GRIN2BQ13224 1484 aa28.27■■■□□ 2.12
TRMT2A-220ENST00000494820 MAGI1Q96QZ7 1491 aaPredicted RBP28.26■■■□□ 2.11
TRMT2A-220ENST00000494820 CLASP1Q7Z460 1538 aa28.23■■■□□ 2.11
TRMT2A-220ENST00000494820 TRHP20396 242 aaPredicted RBP28.23■■■□□ 2.11
TRMT2A-220ENST00000494820 SYNJ2O15056 1496 aa28.19■■■□□ 2.1
TRMT2A-220ENST00000494820 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
TRMT2A-220ENST00000494820 GAPVD1Q14C86 1478 aa28.15■■■□□ 2.1
TRMT2A-220ENST00000494820 SYNJ1O43426 1573 aa28.14■■■□□ 2.1
TRMT2A-220ENST00000494820 ABCA10Q8WWZ4 1543 aa28.1■■■□□ 2.09
TRMT2A-220ENST00000494820 ABCA5Q8WWZ7 1642 aa28■■■□□ 2.07
TRMT2A-220ENST00000494820 WRNQ14191 1432 aaPredicted RBP eCLIP27.96■■■□□ 2.07
TRMT2A-220ENST00000494820 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
TRMT2A-220ENST00000494820 GRIN2AQ12879 1464 aa27.89■■■□□ 2.06
TRMT2A-220ENST00000494820 NUP160Q12769 1436 aa27.85■■■□□ 2.05
TRMT2A-220ENST00000494820 ERCC6L2Q5T890 1561 aa27.82■■■□□ 2.04
TRMT2A-220ENST00000494820 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
TRMT2A-220ENST00000494820 FHAD1B1AJZ9 1412 aa27.8■■■□□ 2.04
TRMT2A-220ENST00000494820 ADAMTS12P58397 1594 aa27.8■■■□□ 2.04
TRMT2A-220ENST00000494820 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
TRMT2A-220ENST00000494820 BIVM-ERCC5R4GMW8 1640 aa27.76■■■□□ 2.03
TRMT2A-220ENST00000494820 ERICH3Q5RHP9 1530 aa27.7■■■□□ 2.02
TRMT2A-220ENST00000494820 SHROOM2Q13796 1616 aa27.63■■■□□ 2.01
TRMT2A-220ENST00000494820 JPH4Q96JJ6 628 aa27.6■■■□□ 2.01
TRMT2A-220ENST00000494820 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2.01
TRMT2A-220ENST00000494820 AEBP2Q6ZN18 517 aaPredicted RBP27.48■■□□□ 1.99
TRMT2A-220ENST00000494820 IGF1RP08069 1367 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms