RNA–Protein interactions for RNA: ENST00000529736.5

CTTN-213, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-213ENST00000529736 NISCHQ9Y2I1 1504 aa34.68■■■■□ 3.14
CTTN-213ENST00000529736 ABCC9O60706 1549 aa32.51■■■□□ 2.8
CTTN-213ENST00000529736 CCDC180Q9P1Z9 1646 aa31.55■■■□□ 2.64
CTTN-213ENST00000529736 DNAJC5BQ9UF47 199 aa31.49■■■□□ 2.63
CTTN-213ENST00000529736 RB1CC1Q8TDY2 1594 aa30.46■■■□□ 2.47
CTTN-213ENST00000529736 PABPN1Q86U42 306 aaKnown RBP eCLIP30.13■■■□□ 2.418e-7■■■□□ 16.3
CTTN-213ENST00000529736 UNC13AQ9UPW8 1703 aa30.02■■■□□ 2.4
CTTN-213ENST00000529736 NACADO15069 1562 aa30.02■■■□□ 2.4
CTTN-213ENST00000529736 BICRAQ9NZM4 1560 aa29.75■■■□□ 2.35
CTTN-213ENST00000529736 DCAF8L2P0C7V8 631 aa29.66■■■□□ 2.34
CTTN-213ENST00000529736 DNAJC5Q9H3Z4 198 aa29.52■■■□□ 2.32
CTTN-213ENST00000529736 CC2D2AQ9P2K1 1620 aa29.37■■■□□ 2.29
CTTN-213ENST00000529736 CECR2Q9BXF3 1484 aa29.36■■■□□ 2.29
CTTN-213ENST00000529736 MYO15BQ96JP2 1530 aa29.24■■■□□ 2.27
CTTN-213ENST00000529736 EIF4G1Q04637 1599 aaKnown RBP29.02■■■□□ 2.24
CTTN-213ENST00000529736 SHROOM4Q9ULL8 1493 aa29.02■■■□□ 2.24
CTTN-213ENST00000529736 SCRIBQ14160 1630 aa28.71■■■□□ 2.19
CTTN-213ENST00000529736 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
CTTN-213ENST00000529736 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.15
CTTN-213ENST00000529736 CUX2O14529 1486 aa28.35■■■□□ 2.13
CTTN-213ENST00000529736 ERCC6Q03468 1493 aa28.05■■■□□ 2.08
CTTN-213ENST00000529736 TRIM41Q8WV44 630 aa27.8■■■□□ 2.04
CTTN-213ENST00000529736 NCAPD3P42695 1498 aa27.73■■■□□ 2.03
CTTN-213ENST00000529736 NESP48681 1621 aa27.71■■■□□ 2.03
CTTN-213ENST00000529736 THOC2Q8NI27 1593 aaKnown RBP27.61■■■□□ 2.01
CTTN-213ENST00000529736 ATAD2BQ9ULI0 1458 aa27.53■■■□□ 2
CTTN-213ENST00000529736 HMGXB3Q12766 1538 aa27.42■■□□□ 1.98
CTTN-213ENST00000529736 KIF21AQ7Z4S6 1674 aa27.37■■□□□ 1.97
CTTN-213ENST00000529736 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
CTTN-213ENST00000529736 SMARCA4P51532 1647 aa27.29■■□□□ 1.96
CTTN-213ENST00000529736 LAMC3Q9Y6N6 1575 aa27.26■■□□□ 1.96
CTTN-213ENST00000529736 BAZ1BQ9UIG0 1483 aaKnown RBP27.16■■□□□ 1.94
CTTN-213ENST00000529736 PDS5BQ9NTI5 1447 aa27.08■■□□□ 1.93
CTTN-213ENST00000529736 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
CTTN-213ENST00000529736 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.91
CTTN-213ENST00000529736 WDR62O43379 1518 aa26.95■■□□□ 1.91
CTTN-213ENST00000529736 MRC2Q9UBG0 1479 aa26.94■■□□□ 1.9
CTTN-213ENST00000529736 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
CTTN-213ENST00000529736 CADPSQ9ULU8 1353 aa26.83■■□□□ 1.88
CTTN-213ENST00000529736 RIMBP3CA6NJZ7 1639 aa26.77■■□□□ 1.88
CTTN-213ENST00000529736 RIMBP3BA6NNM3 1639 aa26.77■■□□□ 1.88
CTTN-213ENST00000529736 RIMBP3Q9UFD9 1639 aa26.77■■□□□ 1.88
CTTN-213ENST00000529736 MROH2BQ7Z745 1585 aa26.75■■□□□ 1.87
CTTN-213ENST00000529736 CEP164Q9UPV0 1460 aa26.63■■□□□ 1.85
CTTN-213ENST00000529736 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
CTTN-213ENST00000529736 ARHGEF11O15085 1522 aa26.53■■□□□ 1.84
CTTN-213ENST00000529736 URB2Q14146 1524 aaKnown RBP26.44■■□□□ 1.82
CTTN-213ENST00000529736 WIZO95785 1651 aa26.44■■□□□ 1.82
CTTN-213ENST00000529736 CYB5RLQ6IPT4 315 aa26.38■■□□□ 1.81
CTTN-213ENST00000529736 TRHP20396 242 aaPredicted RBP26.35■■□□□ 1.81
CTTN-213ENST00000529736 CFTRP13569 1480 aa26.34■■□□□ 1.81
CTTN-213ENST00000529736 ZNF608Q9ULD9 1512 aaPredicted RBP26.29■■□□□ 1.8
CTTN-213ENST00000529736 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
CTTN-213ENST00000529736 ARAP1Q96P48 1450 aa26.22■■□□□ 1.79
CTTN-213ENST00000529736 CHD1O14646 1710 aa26.15■■□□□ 1.78
CTTN-213ENST00000529736 IFT140Q96RY7 1462 aa26.12■■□□□ 1.77
CTTN-213ENST00000529736 PRDM2Q13029 1718 aa26.12■■□□□ 1.77
CTTN-213ENST00000529736 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
CTTN-213ENST00000529736 RSF1Q96T23 1441 aaPredicted RBP25.96■■□□□ 1.75
CTTN-213ENST00000529736 TOPBP1Q92547 1522 aa25.95■■□□□ 1.74
CTTN-213ENST00000529736 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
CTTN-213ENST00000529736 AQRO60306 1485 aaKnown RBP eCLIP25.91■■□□□ 1.743e-14■■■■■ 38.8
CTTN-213ENST00000529736 TARBP1Q13395 1621 aaKnown RBP25.86■■□□□ 1.73
CTTN-213ENST00000529736 FBLN2P98095 1184 aa25.86■■□□□ 1.73
CTTN-213ENST00000529736 DNMBPQ6XZF7 1577 aa25.76■■□□□ 1.71
CTTN-213ENST00000529736 CLASP1Q7Z460 1538 aa25.74■■□□□ 1.71
CTTN-213ENST00000529736 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
CTTN-213ENST00000529736 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
CTTN-213ENST00000529736 POLA1P09884 1462 aaPredicted RBP25.63■■□□□ 1.69
CTTN-213ENST00000529736 RAD54L2Q9Y4B4 1467 aa25.59■■□□□ 1.69
CTTN-213ENST00000529736 SNAPC4Q5SXM2 1469 aa25.58■■□□□ 1.69
CTTN-213ENST00000529736 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
CTTN-213ENST00000529736 SYNJ1O43426 1573 aa25.56■■□□□ 1.68
CTTN-213ENST00000529736 GAPVD1Q14C86 1478 aa25.5■■□□□ 1.67
CTTN-213ENST00000529736 CHMP7Q8WUX9 453 aaPredicted RBP25.48■■□□□ 1.67
CTTN-213ENST00000529736 SOGA1O94964 1423 aa25.46■■□□□ 1.67
CTTN-213ENST00000529736 MAGI1Q96QZ7 1491 aaPredicted RBP25.41■■□□□ 1.66
CTTN-213ENST00000529736 WDR97A6NE52 1622 aa25.4■■□□□ 1.66
CTTN-213ENST00000529736 ILDR1Q86SU0 546 aaPredicted RBP25.39■■□□□ 1.66
CTTN-213ENST00000529736 KIF13AQ9H1H9 1805 aa25.38■■□□□ 1.65
CTTN-213ENST00000529736 SYNJ2O15056 1496 aa25.37■■□□□ 1.65
CTTN-213ENST00000529736 ERCC6L2Q5T890 1561 aa25.35■■□□□ 1.65
CTTN-213ENST00000529736 GRIN2BQ13224 1484 aa25.33■■□□□ 1.65
CTTN-213ENST00000529736 FGD5Q6ZNL6 1462 aa25.32■■□□□ 1.64
CTTN-213ENST00000529736 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
CTTN-213ENST00000529736 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
CTTN-213ENST00000529736 CUX1P39880 1505 aa25.18■■□□□ 1.62
CTTN-213ENST00000529736 KDM4FA0A1W2PPD8 638 aa25.16■■□□□ 1.62
CTTN-213ENST00000529736 CEP170Q5SW79 1584 aa25.14■■□□□ 1.61
CTTN-213ENST00000529736 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
CTTN-213ENST00000529736 SHROOM2Q13796 1616 aa25.05■■□□□ 1.6
CTTN-213ENST00000529736 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
CTTN-213ENST00000529736 NUP160Q12769 1436 aa24.99■■□□□ 1.59
CTTN-213ENST00000529736 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
CTTN-213ENST00000529736 FAM69CQ0P6D2 419 aa24.95■■□□□ 1.58
CTTN-213ENST00000529736 ABCC10Q5T3U5 1492 aa24.94■■□□□ 1.58
CTTN-213ENST00000529736 KDM6BO15054 1643 aa24.92■■□□□ 1.58
CTTN-213ENST00000529736 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
CTTN-213ENST00000529736 TSPOAP1O95153 1857 aa24.91■■□□□ 1.58
CTTN-213ENST00000529736 DIP2BQ9P265 1576 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms