RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 NISCHQ9Y2I1 1504 aa37.19■■■■□ 3.54
CTTN-215ENST00000533931 CCDC180Q9P1Z9 1646 aa32.94■■■□□ 2.86
CTTN-215ENST00000533931 ABCC9O60706 1549 aa31.65■■■□□ 2.66
CTTN-215ENST00000533931 ZCCHC6Q5VYS8 1495 aaKnown RBP31.09■■■□□ 2.57
CTTN-215ENST00000533931 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
CTTN-215ENST00000533931 DCAF1Q9Y4B6 1507 aa30.92■■■□□ 2.54
CTTN-215ENST00000533931 NACADO15069 1562 aa30.87■■■□□ 2.53
CTTN-215ENST00000533931 RB1CC1Q8TDY2 1594 aa30.76■■■□□ 2.52
CTTN-215ENST00000533931 DCAF8L2P0C7V8 631 aa30.68■■■□□ 2.5
CTTN-215ENST00000533931 UNC13AQ9UPW8 1703 aa29.93■■■□□ 2.38
CTTN-215ENST00000533931 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
CTTN-215ENST00000533931 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
CTTN-215ENST00000533931 SHROOM4Q9ULL8 1493 aa29.71■■■□□ 2.35
CTTN-215ENST00000533931 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
CTTN-215ENST00000533931 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
CTTN-215ENST00000533931 CECR2Q9BXF3 1484 aa28.84■■■□□ 2.21
CTTN-215ENST00000533931 BAZ1AQ9NRL2 1556 aaPredicted RBP28.83■■■□□ 2.21
CTTN-215ENST00000533931 SMARCA4P51532 1647 aa28.76■■■□□ 2.19
CTTN-215ENST00000533931 CC2D2AQ9P2K1 1620 aa28.69■■■□□ 2.18
CTTN-215ENST00000533931 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
CTTN-215ENST00000533931 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
CTTN-215ENST00000533931 PEG3Q9GZU2 1588 aa28.56■■■□□ 2.16
CTTN-215ENST00000533931 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
CTTN-215ENST00000533931 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
CTTN-215ENST00000533931 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
CTTN-215ENST00000533931 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
CTTN-215ENST00000533931 HMGXB3Q12766 1538 aa28.38■■■□□ 2.13
CTTN-215ENST00000533931 BAZ1BQ9UIG0 1483 aaKnown RBP28.28■■■□□ 2.12
CTTN-215ENST00000533931 WIZO95785 1651 aa28.28■■■□□ 2.12
CTTN-215ENST00000533931 TOP2AP11388 1531 aaKnown RBP28.12■■■□□ 2.09
CTTN-215ENST00000533931 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
CTTN-215ENST00000533931 CCDC88BA6NC98 1476 aa27.73■■■□□ 2.03
CTTN-215ENST00000533931 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
CTTN-215ENST00000533931 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
CTTN-215ENST00000533931 CFTRP13569 1480 aa27.57■■■□□ 2
CTTN-215ENST00000533931 NESP48681 1621 aa27.5■■□□□ 1.99
CTTN-215ENST00000533931 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
CTTN-215ENST00000533931 PRDM2Q13029 1718 aa27.35■■□□□ 1.97
CTTN-215ENST00000533931 ERCC6Q03468 1493 aa27.29■■□□□ 1.96
CTTN-215ENST00000533931 FANCD2Q9BXW9 1451 aa27.28■■□□□ 1.96
CTTN-215ENST00000533931 CEP164Q9UPV0 1460 aa27.23■■□□□ 1.95
CTTN-215ENST00000533931 KIF21AQ7Z4S6 1674 aa27.2■■□□□ 1.94
CTTN-215ENST00000533931 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
CTTN-215ENST00000533931 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
CTTN-215ENST00000533931 WDR62O43379 1518 aa27.03■■□□□ 1.92
CTTN-215ENST00000533931 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
CTTN-215ENST00000533931 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
CTTN-215ENST00000533931 CUX2O14529 1486 aa26.96■■□□□ 1.91
CTTN-215ENST00000533931 DNMBPQ6XZF7 1577 aa26.93■■□□□ 1.9
CTTN-215ENST00000533931 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
CTTN-215ENST00000533931 WRNQ14191 1432 aaPredicted RBP eCLIP26.84■■□□□ 1.89
CTTN-215ENST00000533931 CUX1P39880 1505 aa26.83■■□□□ 1.89
CTTN-215ENST00000533931 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
CTTN-215ENST00000533931 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
CTTN-215ENST00000533931 SYNJ1O43426 1573 aa26.71■■□□□ 1.87
CTTN-215ENST00000533931 POLA1P09884 1462 aaPredicted RBP26.69■■□□□ 1.86
CTTN-215ENST00000533931 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
CTTN-215ENST00000533931 IFT140Q96RY7 1462 aa26.67■■□□□ 1.86
CTTN-215ENST00000533931 SOGA1O94964 1423 aa26.58■■□□□ 1.85
CTTN-215ENST00000533931 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
CTTN-215ENST00000533931 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
CTTN-215ENST00000533931 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
CTTN-215ENST00000533931 ABCA10Q8WWZ4 1543 aa26.49■■□□□ 1.83
CTTN-215ENST00000533931 TRIM41Q8WV44 630 aa26.43■■□□□ 1.82
CTTN-215ENST00000533931 ZNF608Q9ULD9 1512 aaPredicted RBP26.4■■□□□ 1.82
CTTN-215ENST00000533931 CHIC1Q5VXU3 224 aa26.37■■□□□ 1.81
CTTN-215ENST00000533931 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
CTTN-215ENST00000533931 ABCA5Q8WWZ7 1642 aa26.34■■□□□ 1.81
CTTN-215ENST00000533931 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.8
CTTN-215ENST00000533931 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.83e-14■■■■■ 38.8
CTTN-215ENST00000533931 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
CTTN-215ENST00000533931 KIF27Q86VH2 1401 aa26.28■■□□□ 1.8
CTTN-215ENST00000533931 GRIN2BQ13224 1484 aa26.27■■□□□ 1.8
CTTN-215ENST00000533931 ERICH3Q5RHP9 1530 aa26.2■■□□□ 1.79
CTTN-215ENST00000533931 MAGI1Q96QZ7 1491 aaPredicted RBP26.18■■□□□ 1.78
CTTN-215ENST00000533931 PBRM1Q86U86 1689 aa26.17■■□□□ 1.78
CTTN-215ENST00000533931 EEA1Q15075 1411 aa26.13■■□□□ 1.77
CTTN-215ENST00000533931 SNAPC4Q5SXM2 1469 aa26.11■■□□□ 1.77
CTTN-215ENST00000533931 IGF1RP08069 1367 aa26.07■■□□□ 1.76
CTTN-215ENST00000533931 ADAMTS12P58397 1594 aa26.05■■□□□ 1.76
CTTN-215ENST00000533931 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
CTTN-215ENST00000533931 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
CTTN-215ENST00000533931 CUL7Q14999 1698 aa26.03■■□□□ 1.76
CTTN-215ENST00000533931 RUSC2Q8N2Y8 1516 aa26.03■■□□□ 1.76
CTTN-215ENST00000533931 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
CTTN-215ENST00000533931 CHMP7Q8WUX9 453 aaPredicted RBP25.92■■□□□ 1.74
CTTN-215ENST00000533931 GRIN2AQ12879 1464 aa25.91■■□□□ 1.74
CTTN-215ENST00000533931 CSRNP3Q8WYN3 585 aa25.9■■□□□ 1.74
CTTN-215ENST00000533931 PRXQ9BXM0 1461 aa25.89■■□□□ 1.73
CTTN-215ENST00000533931 CHD1O14646 1710 aa25.88■■□□□ 1.73
CTTN-215ENST00000533931 RAPGEF2Q9Y4G8 1499 aa25.85■■□□□ 1.73
CTTN-215ENST00000533931 FBLN2P98095 1184 aa25.84■■□□□ 1.73
CTTN-215ENST00000533931 OSCARQ8IYS5 282 aa25.83■■□□□ 1.73
CTTN-215ENST00000533931 NUP160Q12769 1436 aa25.81■■□□□ 1.72
CTTN-215ENST00000533931 KIF21BO75037 1637 aa25.76■■□□□ 1.71
CTTN-215ENST00000533931 FAM9AQ8IZU1 332 aaPredicted RBP25.73■■□□□ 1.71
CTTN-215ENST00000533931 CLASP1Q7Z460 1538 aa25.73■■□□□ 1.71
CTTN-215ENST00000533931 CEP170Q5SW79 1584 aa25.72■■□□□ 1.71
CTTN-215ENST00000533931 DNAJC5Q9H3Z4 198 aa25.67■■□□□ 1.7
CTTN-215ENST00000533931 KIAA0586Q9BVV6 1533 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms