Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ZNF195-224ENST00000529789 570 ntTSL 34.41□□□□□ -1.72e-8■□□□□ 10.7
SRSF1Q07955 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.777e-6■□□□□ 10.7
SRSF1Q07955 MAP4K5-206ENST00000555216 592 ntTSL 43.65□□□□□ -1.837e-6■□□□□ 10.7
SRSF1Q07955 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.97■□□□□ 0.472e-10■□□□□ 10.7
SRSF1Q07955 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.612e-10■□□□□ 10.7
SRSF1Q07955 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.64□□□□□ -0.232e-6■□□□□ 10.6
SRSF1Q07955 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.442e-6■□□□□ 10.6
SRSF1Q07955 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.582e-6■□□□□ 10.6
SRSF1Q07955 SLC35E2B-201ENST00000480991 2860 ntTSL 210.89□□□□□ -0.672e-6■□□□□ 10.6
SRSF1Q07955 KMT2E-206ENST00000474203 617 ntTSL 39.54□□□□□ -0.884e-10■□□□□ 10.6
SRSF1Q07955 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.139e-7■□□□□ 10.6
SRSF1Q07955 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC10.31□□□□□ -0.769e-7■□□□□ 10.6
SRSF1Q07955 VEGFA-214ENST00000493786 551 ntTSL 26.69□□□□□ -1.343e-7■□□□□ 10.6
SRSF1Q07955 SF3B2-201ENST00000322535 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.053e-8■□□□□ 10.6
SRSF1Q07955 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC7.54□□□□□ -1.23e-8■□□□□ 10.6
SRSF1Q07955 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.122e-8■□□□□ 10.6
SRSF1Q07955 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.632e-8■□□□□ 10.6
SRSF1Q07955 HNRNPH3-205ENST00000469172 3356 ntTSL 28.08□□□□□ -1.122e-8■□□□□ 10.6
SRSF1Q07955 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.862e-6■□□□□ 10.6
SRSF1Q07955 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.012e-6■□□□□ 10.6
SRSF1Q07955 VCL-206ENST00000623461 7995 ntTSL 1 (best)7.47□□□□□ -1.212e-6■□□□□ 10.6
SRSF1Q07955 VCL-207ENST00000624354 3307 ntTSL 26.76□□□□□ -1.332e-6■□□□□ 10.6
SRSF1Q07955 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.31□□□□□ -0.122e-6■□□□□ 10.6
SRSF1Q07955 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.89□□□□□ -1.152e-6■□□□□ 10.6
SRSF1Q07955 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.352e-6■□□□□ 10.6
SRSF1Q07955 CLK1-207ENST00000461981 3173 ntTSL 25.45□□□□□ -1.542e-6■□□□□ 10.6
SRSF1Q07955 CLK1-202ENST00000409403 1664 ntTSL 55.23□□□□□ -1.572e-6■□□□□ 10.6
SRSF1Q07955 CLK1-210ENST00000473565 3208 ntTSL 1 (best)5.05□□□□□ -1.62e-6■□□□□ 10.6
SRSF1Q07955 CLK1-204ENST00000432425 1682 ntTSL 1 (best)3.88□□□□□ -1.792e-6■□□□□ 10.6
SRSF1Q07955 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.41■■□□□ 1.983e-7■□□□□ 10.6
SRSF1Q07955 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.85■■□□□ 1.253e-7■□□□□ 10.6
SRSF1Q07955 HES6-207ENST00000417803 474 ntTSL 321.5■■□□□ 1.033e-7■□□□□ 10.6
SRSF1Q07955 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.883e-7■□□□□ 10.6
SRSF1Q07955 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.52■□□□□ 0.883e-7■□□□□ 10.6
SRSF1Q07955 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.813e-7■□□□□ 10.6
SRSF1Q07955 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.28■□□□□ 0.683e-7■□□□□ 10.6
SRSF1Q07955 MYO19-215ENST00000616159 963 ntTSL 218.94■□□□□ 0.623e-7■□□□□ 10.6
SRSF1Q07955 MYO19-223ENST00000620869 574 ntTSL 417.55■□□□□ 0.43e-7■□□□□ 10.6
SRSF1Q07955 KLHDC4-202ENST00000316853 1287 ntTSL 1 (best)16.83■□□□□ 0.286e-6■□□□□ 10.6
SRSF1Q07955 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.99■□□□□ 0.152e-9■□□□□ 10.6
SRSF1Q07955 ABCB8-213ENST00000482309 1994 ntTSL 215.6■□□□□ 0.092e-9■□□□□ 10.6
SRSF1Q07955 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.23■□□□□ 0.033e-7■□□□□ 10.6
SRSF1Q07955 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.1□□□□□ -0.153e-7■□□□□ 10.6
SRSF1Q07955 LZTR1-204ENST00000415817 2323 ntTSL 313.91□□□□□ -0.183e-7■□□□□ 10.6
SRSF1Q07955 ABCB8-205ENST00000466514 2199 ntTSL 213.87□□□□□ -0.192e-9■□□□□ 10.6
SRSF1Q07955 ABCB8-208ENST00000470645 1722 ntTSL 212.93□□□□□ -0.342e-9■□□□□ 10.6
SRSF1Q07955 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.62□□□□□ -0.392e-9■□□□□ 10.6
SRSF1Q07955 LZTR1-218ENST00000498649 1044 ntTSL 312.51□□□□□ -0.413e-7■□□□□ 10.6
SRSF1Q07955 RBM5-211ENST00000462025 573 ntTSL 412.23□□□□□ -0.453e-7■□□□□ 10.6
SRSF1Q07955 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.18□□□□□ -0.463e-7■□□□□ 10.6
SRSF1Q07955 HDAC1-209ENST00000484305 561 ntTSL 512.14□□□□□ -0.476e-10■□□□□ 10.6
SRSF1Q07955 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.72□□□□□ -0.532e-9■□□□□ 10.6
SRSF1Q07955 ABCB8-219ENST00000491920 717 ntTSL 211.48□□□□□ -0.572e-9■□□□□ 10.6
SRSF1Q07955 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.41□□□□□ -0.582e-9■□□□□ 10.6
SRSF1Q07955 STAG3L2-205ENST00000622215 1026 ntTSL 211.31□□□□□ -0.63e-7■□□□□ 10.6
SRSF1Q07955 HIRA-204ENST00000464189 560 ntTSL 411.1□□□□□ -0.632e-9■□□□□ 10.6
SRSF1Q07955 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.643e-7■□□□□ 10.6
SRSF1Q07955 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.652e-9■□□□□ 10.6
SRSF1Q07955 STAG3L2-202ENST00000611766 1047 ntTSL 210.81□□□□□ -0.683e-7■□□□□ 10.6
SRSF1Q07955 STAG3L2-203ENST00000618922 975 ntTSL 210.81□□□□□ -0.683e-7■□□□□ 10.6
SRSF1Q07955 MYO19-211ENST00000613551 556 ntTSL 410.66□□□□□ -0.73e-7■□□□□ 10.6
SRSF1Q07955 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.773e-7■□□□□ 10.6
SRSF1Q07955 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.783e-7■□□□□ 10.6
SRSF1Q07955 STAG3L2-204ENST00000622110 885 ntBASIC10.06□□□□□ -0.83e-7■□□□□ 10.6
SRSF1Q07955 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.813e-7■□□□□ 10.6
SRSF1Q07955 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.823e-7■□□□□ 10.6
SRSF1Q07955 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC9.68□□□□□ -0.862e-9■□□□□ 10.6
SRSF1Q07955 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.883e-7■□□□□ 10.6
SRSF1Q07955 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.883e-7■□□□□ 10.6
SRSF1Q07955 MYO19-227ENST00000622055 897 ntTSL 39.4□□□□□ -0.93e-7■□□□□ 10.6
SRSF1Q07955 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.923e-7■□□□□ 10.6
SRSF1Q07955 LZTR1-209ENST00000463909 3505 ntTSL 1 (best)9.13□□□□□ -0.953e-7■□□□□ 10.6
SRSF1Q07955 MYO19-216ENST00000616207 786 ntTSL 58.89□□□□□ -0.993e-7■□□□□ 10.6
SRSF1Q07955 MYO19-201ENST00000610496 578 ntTSL 38.46□□□□□ -1.063e-7■□□□□ 10.6
SRSF1Q07955 MADD-205ENST00000395344 4988 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.083e-7■□□□□ 10.6
SRSF1Q07955 RBM5-226ENST00000496179 1406 ntTSL 58.13□□□□□ -1.113e-7■□□□□ 10.6
SRSF1Q07955 RBM5-202ENST00000395174 938 ntTSL 38.03□□□□□ -1.123e-10■□□□□ 10.6
SRSF1Q07955 RBM5-212ENST00000464087 5616 ntTSL 26.87□□□□□ -1.313e-10■□□□□ 10.6
SRSF1Q07955 RBM5-215ENST00000471995 762 ntTSL 36.84□□□□□ -1.313e-7■□□□□ 10.6
SRSF1Q07955 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.323e-10■□□□□ 10.6
SRSF1Q07955 PRPF40A-210ENST00000489741 776 ntTSL 36.28□□□□□ -1.42e-9■□□□□ 10.6
SRSF1Q07955 MYO19-222ENST00000620644 565 ntTSL 44.17□□□□□ -1.743e-7■□□□□ 10.6
SRSF1Q07955 RBM5-217ENST00000474818 832 ntTSL 33.78□□□□□ -1.83e-7■□□□□ 10.6
SRSF1Q07955 MAN2C1-234ENST00000566634 1540 ntTSL 515.21■□□□□ 0.034e-8■□□□□ 10.6
SRSF1Q07955 MAN2C1-228ENST00000565953 557 ntTSL 313.26□□□□□ -0.294e-8■□□□□ 10.6
SRSF1Q07955 MAN2C1-215ENST00000563596 675 ntTSL 39.85□□□□□ -0.834e-8■□□□□ 10.6
SRSF1Q07955 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13□□□□□ -0.334e-9■□□□□ 10.6
SRSF1Q07955 SRRM2-224ENST00000575870 696 ntTSL 38.88□□□□□ -0.994e-9■□□□□ 10.6
SRSF1Q07955 SRRM2-203ENST00000570655 575 ntTSL 28.11□□□□□ -1.114e-9■□□□□ 10.6
SRSF1Q07955 SRRM2-209ENST00000572278 711 ntTSL 28.08□□□□□ -1.124e-9■□□□□ 10.6
SRSF1Q07955 SRRM2-215ENST00000573498 994 ntTSL 37.46□□□□□ -1.224e-9■□□□□ 10.6
SRSF1Q07955 EPS8L2-202ENST00000524474 907 ntTSL 217.13■□□□□ 0.333e-7■□□□□ 10.6
SRSF1Q07955 HNRNPH1-237ENST00000520415 620 ntTSL 311.86□□□□□ -0.512e-17■□□□□ 10.6
SRSF1Q07955 RBM6-205ENST00000425608 1886 ntTSL 216.92■□□□□ 0.33e-6■□□□□ 10.6
SRSF1Q07955 UBE2D3-214ENST00000503282 584 ntTSL 220.18■□□□□ 0.822e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.812e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-229ENST00000510129 582 ntTSL 319.82■□□□□ 0.762e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-220ENST00000505307 743 ntTSL 519.27■□□□□ 0.682e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-215ENST00000503418 662 ntTSL 418.57■□□□□ 0.562e-8■□□□□ 10.6
SRSF1Q07955 UBE2D3-216ENST00000503742 1977 ntTSL 1 (best)16.94■□□□□ 0.32e-8■□□□□ 10.6
Retrieved 100 of 14,836 protein–RNA pairs in 350.4 ms