RNA–Protein interactions for RNA: ENST00000297504.10

ABCB8-201, Transcript of ATP binding cassette subfamily B member 8, humanhuman

TSL 2 BASIC

Gene ABCB8, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB8-201ENST00000297504 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.69
ABCB8-201ENST00000297504 CCDC180Q9P1Z9 1646 aa27.22■■□□□ 1.95
ABCB8-201ENST00000297504 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
ABCB8-201ENST00000297504 ZCCHC6Q5VYS8 1495 aaKnown RBP26.82■■□□□ 1.88
ABCB8-201ENST00000297504 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
ABCB8-201ENST00000297504 SUPT5HO00267 1087 aaKnown RBP26.17■■□□□ 1.78
ABCB8-201ENST00000297504 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
ABCB8-201ENST00000297504 ABCC9O60706 1549 aa25.67■■□□□ 1.7
ABCB8-201ENST00000297504 SCRIBQ14160 1630 aa25.51■■□□□ 1.67
ABCB8-201ENST00000297504 MYO15BQ96JP2 1530 aa25.46■■□□□ 1.67
ABCB8-201ENST00000297504 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
ABCB8-201ENST00000297504 NACADO15069 1562 aa25.28■■□□□ 1.64
ABCB8-201ENST00000297504 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
ABCB8-201ENST00000297504 RB1CC1Q8TDY2 1594 aa24.98■■□□□ 1.59
ABCB8-201ENST00000297504 CECR2Q9BXF3 1484 aa24.9■■□□□ 1.58
ABCB8-201ENST00000297504 HRCP23327 699 aa24.88■■□□□ 1.57
ABCB8-201ENST00000297504 PCGF6Q9BYE7 350 aa24.81■■□□□ 1.56
ABCB8-201ENST00000297504 MROH2BQ7Z745 1585 aa24.75■■□□□ 1.55
ABCB8-201ENST00000297504 LOC105371045A0A1W2PR82 267 aa24.68■■□□□ 1.54
ABCB8-201ENST00000297504 UNC13AQ9UPW8 1703 aa24.62■■□□□ 1.53
ABCB8-201ENST00000297504 WIZO95785 1651 aa24.6■■□□□ 1.53
ABCB8-201ENST00000297504 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
ABCB8-201ENST00000297504 PPARGC1BQ86YN6 1023 aaKnown RBP24.49■■□□□ 1.51
ABCB8-201ENST00000297504 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
ABCB8-201ENST00000297504 TRIM41Q8WV44 630 aa24.39■■□□□ 1.49
ABCB8-201ENST00000297504 BICRAQ9NZM4 1560 aa24.33■■□□□ 1.49
ABCB8-201ENST00000297504 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
ABCB8-201ENST00000297504 FAM9AQ8IZU1 332 aaPredicted RBP24.23■■□□□ 1.47
ABCB8-201ENST00000297504 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
ABCB8-201ENST00000297504 TOP2AP11388 1531 aaKnown RBP24.17■■□□□ 1.46
ABCB8-201ENST00000297504 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
ABCB8-201ENST00000297504 EHMT2Q96KQ7 1210 aa24.07■■□□□ 1.44
ABCB8-201ENST00000297504 SMARCA2P51531 1590 aa24.04■■□□□ 1.44
ABCB8-201ENST00000297504 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
ABCB8-201ENST00000297504 ABCC8Q09428 1581 aa23.9■■□□□ 1.42
ABCB8-201ENST00000297504 PEG3Q9GZU2 1588 aa23.84■■□□□ 1.41
ABCB8-201ENST00000297504 ATAD2BQ9ULI0 1458 aa23.82■■□□□ 1.4
ABCB8-201ENST00000297504 BAZ1BQ9UIG0 1483 aaKnown RBP23.73■■□□□ 1.39
ABCB8-201ENST00000297504 ZEB1P37275 1124 aaPredicted RBP23.65■■□□□ 1.38
ABCB8-201ENST00000297504 SOGA1O94964 1423 aa23.59■■□□□ 1.37
ABCB8-201ENST00000297504 WRNQ14191 1432 aaPredicted RBP eCLIP23.52■■□□□ 1.36
ABCB8-201ENST00000297504 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
ABCB8-201ENST00000297504 SYNJ1O43426 1573 aa23.43■■□□□ 1.34
ABCB8-201ENST00000297504 CSRNP3Q8WYN3 585 aa23.42■■□□□ 1.34
ABCB8-201ENST00000297504 NCAPD3P42695 1498 aa23.41■■□□□ 1.34
ABCB8-201ENST00000297504 HMGXB3Q12766 1538 aa23.35■■□□□ 1.33
ABCB8-201ENST00000297504 EEA1Q15075 1411 aa23.32■■□□□ 1.32
ABCB8-201ENST00000297504 UBTFP17480 764 aaKnown RBP23.31■■□□□ 1.32
ABCB8-201ENST00000297504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.3■■□□□ 1.32
ABCB8-201ENST00000297504 CEP162Q5TB80 1403 aa23.24■■□□□ 1.31
ABCB8-201ENST00000297504 TTBK1Q5TCY1 1321 aaPredicted RBP23.24■■□□□ 1.31
ABCB8-201ENST00000297504 TNIKQ9UKE5 1360 aa23.23■■□□□ 1.31
ABCB8-201ENST00000297504 CCER1Q8TC90 406 aaPredicted RBP23.19■■□□□ 1.3
ABCB8-201ENST00000297504 GOLGA3Q08378 1498 aa23.17■■□□□ 1.3
ABCB8-201ENST00000297504 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
ABCB8-201ENST00000297504 PELP1Q8IZL8 1130 aaKnown RBP23.13■■□□□ 1.29
ABCB8-201ENST00000297504 SCAF1Q9H7N4 1312 aaKnown RBP23.13■■□□□ 1.29
ABCB8-201ENST00000297504 CFTRP13569 1480 aa23.11■■□□□ 1.29
ABCB8-201ENST00000297504 CC2D2AQ9P2K1 1620 aa23.09■■□□□ 1.29
ABCB8-201ENST00000297504 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
ABCB8-201ENST00000297504 BIVM-ERCC5R4GMW8 1640 aa23.07■■□□□ 1.28
ABCB8-201ENST00000297504 CUX1P39880 1505 aa23.06■■□□□ 1.28
ABCB8-201ENST00000297504 KIF21BO75037 1637 aa23.04■■□□□ 1.28
ABCB8-201ENST00000297504 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
ABCB8-201ENST00000297504 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
ABCB8-201ENST00000297504 CADPSQ9ULU8 1353 aa22.96■■□□□ 1.27
ABCB8-201ENST00000297504 CLIP1P30622 1438 aa22.91■■□□□ 1.26
ABCB8-201ENST00000297504 PRDM2Q13029 1718 aa22.87■■□□□ 1.25
ABCB8-201ENST00000297504 DIEXFQ68CQ4 756 aaKnown RBP22.83■■□□□ 1.25
ABCB8-201ENST00000297504 KIF27Q86VH2 1401 aa22.83■■□□□ 1.25
ABCB8-201ENST00000297504 PRXQ9BXM0 1461 aa22.82■■□□□ 1.24
ABCB8-201ENST00000297504 NEUROD1Q13562 356 aa22.79■■□□□ 1.24
ABCB8-201ENST00000297504 ACIN1Q9UKV3 1341 aaKnown RBP22.76■■□□□ 1.23
ABCB8-201ENST00000297504 NESP48681 1621 aa22.75■■□□□ 1.23
ABCB8-201ENST00000297504 FANCD2Q9BXW9 1451 aa22.74■■□□□ 1.23
ABCB8-201ENST00000297504 ERICH3Q5RHP9 1530 aa22.74■■□□□ 1.23
ABCB8-201ENST00000297504 VPS8Q8N3P4 1428 aa22.73■■□□□ 1.23
ABCB8-201ENST00000297504 CUX2O14529 1486 aa22.73■■□□□ 1.23
ABCB8-201ENST00000297504 DNAJC5BQ9UF47 199 aa22.72■■□□□ 1.23
ABCB8-201ENST00000297504 FGD5Q6ZNL6 1462 aa22.72■■□□□ 1.23
ABCB8-201ENST00000297504 APLP2Q06481 763 aa22.66■■□□□ 1.22
ABCB8-201ENST00000297504 HNRNPUL2Q1KMD3 747 aaKnown RBP22.66■■□□□ 1.22
ABCB8-201ENST00000297504 IGF1RP08069 1367 aa22.65■■□□□ 1.22
ABCB8-201ENST00000297504 MYT1Q01538 1121 aa22.62■■□□□ 1.21
ABCB8-201ENST00000297504 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
ABCB8-201ENST00000297504 RAD54L2Q9Y4B4 1467 aa22.58■■□□□ 1.2
ABCB8-201ENST00000297504 ZNF316A6NFI3 1004 aaPredicted RBP22.57■■□□□ 1.2
ABCB8-201ENST00000297504 GTF3C3Q9Y5Q9 886 aa22.56■■□□□ 1.2
ABCB8-201ENST00000297504 CENPBP07199 599 aaPredicted RBP22.55■■□□□ 1.2
ABCB8-201ENST00000297504 CARMIL1Q5VZK9 1371 aa22.55■■□□□ 1.2
ABCB8-201ENST00000297504 TOPBP1Q92547 1522 aa22.54■■□□□ 1.2
ABCB8-201ENST00000297504 DNMBPQ6XZF7 1577 aa22.53■■□□□ 1.2
ABCB8-201ENST00000297504 POLA1P09884 1462 aaPredicted RBP22.5■■□□□ 1.19
ABCB8-201ENST00000297504 ARHGAP35Q9NRY4 1499 aa22.48■■□□□ 1.19
ABCB8-201ENST00000297504 KANK4Q5T7N3 995 aaPredicted RBP22.48■■□□□ 1.19
ABCB8-201ENST00000297504 LAMC3Q9Y6N6 1575 aa22.47■■□□□ 1.19
ABCB8-201ENST00000297504 URB2Q14146 1524 aaKnown RBP22.44■■□□□ 1.18
ABCB8-201ENST00000297504 YTHDC1Q96MU7 727 aaKnown RBP22.41■■□□□ 1.18
ABCB8-201ENST00000297504 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
ABCB8-201ENST00000297504 P3H3Q8IVL6 736 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms