RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 NISCHQ9Y2I1 1504 aa39.62■■■■□ 3.93
CLK1-205ENST00000434813 CCDC180Q9P1Z9 1646 aa34.38■■■■□ 3.09
CLK1-205ENST00000434813 ZCCHC6Q5VYS8 1495 aaKnown RBP33.52■■■□□ 2.96
CLK1-205ENST00000434813 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
CLK1-205ENST00000434813 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
CLK1-205ENST00000434813 DCAF1Q9Y4B6 1507 aa32.72■■■□□ 2.83
CLK1-205ENST00000434813 ABCC9O60706 1549 aa32.68■■■□□ 2.82
CLK1-205ENST00000434813 SUPT5HO00267 1087 aaKnown RBP32.36■■■□□ 2.77
CLK1-205ENST00000434813 MYO15BQ96JP2 1530 aa32.23■■■□□ 2.75
CLK1-205ENST00000434813 NACADO15069 1562 aa32■■■□□ 2.71
CLK1-205ENST00000434813 SCRIBQ14160 1630 aa31.75■■■□□ 2.67
CLK1-205ENST00000434813 RB1CC1Q8TDY2 1594 aa31.7■■■□□ 2.67
CLK1-205ENST00000434813 CHIC1Q5VXU3 224 aa31.49■■■□□ 2.63
CLK1-205ENST00000434813 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
CLK1-205ENST00000434813 UNC13AQ9UPW8 1703 aa30.99■■■□□ 2.55
CLK1-205ENST00000434813 CECR2Q9BXF3 1484 aa30.78■■■□□ 2.52
CLK1-205ENST00000434813 MROH2BQ7Z745 1585 aa30.69■■■□□ 2.5
CLK1-205ENST00000434813 BICRAQ9NZM4 1560 aa30.68■■■□□ 2.5
CLK1-205ENST00000434813 PABPN1Q86U42 306 aaKnown RBP eCLIP30.68■■■□□ 2.5
CLK1-205ENST00000434813 BAZ1AQ9NRL2 1556 aaPredicted RBP30.59■■■□□ 2.49
CLK1-205ENST00000434813 WIZO95785 1651 aa30.51■■■□□ 2.47
CLK1-205ENST00000434813 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
CLK1-205ENST00000434813 LOC105371045A0A1W2PR82 267 aa30.36■■■□□ 2.45
CLK1-205ENST00000434813 TRIM41Q8WV44 630 aa30.29■■■□□ 2.44
CLK1-205ENST00000434813 EIF4G1Q04637 1599 aaKnown RBP30.18■■■□□ 2.42
CLK1-205ENST00000434813 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
CLK1-205ENST00000434813 PCGF6Q9BYE7 350 aa30.08■■■□□ 2.41
CLK1-205ENST00000434813 HRCP23327 699 aa30.06■■■□□ 2.4
CLK1-205ENST00000434813 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
CLK1-205ENST00000434813 SMARCA2P51531 1590 aa29.95■■■□□ 2.39
CLK1-205ENST00000434813 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.38
CLK1-205ENST00000434813 ATAD2BQ9ULI0 1458 aa29.86■■■□□ 2.37
CLK1-205ENST00000434813 FAM9AQ8IZU1 332 aaPredicted RBP29.84■■■□□ 2.37
CLK1-205ENST00000434813 TRIM26Q12899 539 aaPredicted RBP29.76■■■□□ 2.36
CLK1-205ENST00000434813 BAZ1BQ9UIG0 1483 aaKnown RBP29.75■■■□□ 2.35
CLK1-205ENST00000434813 ABCC8Q09428 1581 aa29.66■■■□□ 2.34
CLK1-205ENST00000434813 DNAJC5BQ9UF47 199 aa29.64■■■□□ 2.33
CLK1-205ENST00000434813 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
CLK1-205ENST00000434813 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
CLK1-205ENST00000434813 HMGXB3Q12766 1538 aa29.52■■■□□ 2.32
CLK1-205ENST00000434813 EHMT2Q96KQ7 1210 aa29.43■■■□□ 2.3
CLK1-205ENST00000434813 EEA1Q15075 1411 aa29.36■■■□□ 2.29
CLK1-205ENST00000434813 SOGA1O94964 1423 aa29.29■■■□□ 2.28
CLK1-205ENST00000434813 WRNQ14191 1432 aaPredicted RBP eCLIP29.28■■■□□ 2.28
CLK1-205ENST00000434813 PPARGC1BQ86YN6 1023 aaKnown RBP29.25■■■□□ 2.27
CLK1-205ENST00000434813 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
CLK1-205ENST00000434813 RUSC2Q8N2Y8 1516 aa29.14■■■□□ 2.25
CLK1-205ENST00000434813 TNIKQ9UKE5 1360 aa29.13■■■□□ 2.25
CLK1-205ENST00000434813 CEP162Q5TB80 1403 aa29.11■■■□□ 2.25
CLK1-205ENST00000434813 CSRNP3Q8WYN3 585 aa29.1■■■□□ 2.25
CLK1-205ENST00000434813 ZEB1P37275 1124 aaPredicted RBP29.07■■■□□ 2.24
CLK1-205ENST00000434813 GOLGA3Q08378 1498 aa29.06■■■□□ 2.24
CLK1-205ENST00000434813 KIF21BO75037 1637 aa28.98■■■□□ 2.23
CLK1-205ENST00000434813 CFTRP13569 1480 aa28.98■■■□□ 2.23
CLK1-205ENST00000434813 CEP164Q9UPV0 1460 aa28.93■■■□□ 2.22
CLK1-205ENST00000434813 TOP2BQ02880 1626 aa28.93■■■□□ 2.22
CLK1-205ENST00000434813 BIVM-ERCC5R4GMW8 1640 aa28.89■■■□□ 2.21
CLK1-205ENST00000434813 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
CLK1-205ENST00000434813 UBTFP17480 764 aaKnown RBP28.84■■■□□ 2.21
CLK1-205ENST00000434813 PRDM2Q13029 1718 aa28.76■■■□□ 2.19
CLK1-205ENST00000434813 RAPGEF2Q9Y4G8 1499 aa28.66■■■□□ 2.18
CLK1-205ENST00000434813 CLIP1P30622 1438 aa28.63■■■□□ 2.17
CLK1-205ENST00000434813 CUX1P39880 1505 aa28.62■■■□□ 2.17
CLK1-205ENST00000434813 ERICH3Q5RHP9 1530 aa28.58■■■□□ 2.17
CLK1-205ENST00000434813 FANCD2Q9BXW9 1451 aa28.54■■■□□ 2.16
CLK1-205ENST00000434813 VPS8Q8N3P4 1428 aa28.54■■■□□ 2.16
CLK1-205ENST00000434813 PRXQ9BXM0 1461 aa28.52■■■□□ 2.16
CLK1-205ENST00000434813 LAMC3Q9Y6N6 1575 aa28.51■■■□□ 2.15
CLK1-205ENST00000434813 NESP48681 1621 aa28.51■■■□□ 2.15
CLK1-205ENST00000434813 TTBK1Q5TCY1 1321 aaPredicted RBP28.47■■■□□ 2.15
CLK1-205ENST00000434813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.46■■■□□ 2.15
CLK1-205ENST00000434813 CCER1Q8TC90 406 aaPredicted RBP28.43■■■□□ 2.14
CLK1-205ENST00000434813 KIF27Q86VH2 1401 aa28.42■■■□□ 2.14
CLK1-205ENST00000434813 PDS5BQ9NTI5 1447 aa28.34■■■□□ 2.13
CLK1-205ENST00000434813 FGD5Q6ZNL6 1462 aa28.3■■■□□ 2.12
CLK1-205ENST00000434813 DNMBPQ6XZF7 1577 aa28.29■■■□□ 2.12
CLK1-205ENST00000434813 ARAP1Q96P48 1450 aa28.25■■■□□ 2.11
CLK1-205ENST00000434813 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
CLK1-205ENST00000434813 APLP2Q06481 763 aa28.2■■■□□ 2.11
CLK1-205ENST00000434813 CUX2O14529 1486 aa28.19■■■□□ 2.1
CLK1-205ENST00000434813 ERCC6Q03468 1493 aa28.17■■■□□ 2.1
CLK1-205ENST00000434813 RANGAP1P46060 587 aaPredicted RBP28.14■■■□□ 2.09
CLK1-205ENST00000434813 URB2Q14146 1524 aaKnown RBP28.13■■■□□ 2.09
CLK1-205ENST00000434813 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
CLK1-205ENST00000434813 POLA1P09884 1462 aaPredicted RBP28.12■■■□□ 2.09
CLK1-205ENST00000434813 IGF1RP08069 1367 aa28.07■■■□□ 2.08
CLK1-205ENST00000434813 ARHGAP35Q9NRY4 1499 aa28.05■■■□□ 2.08
CLK1-205ENST00000434813 RAD54L2Q9Y4B4 1467 aa28.05■■■□□ 2.08
CLK1-205ENST00000434813 ABCA10Q8WWZ4 1543 aa28.03■■■□□ 2.08
CLK1-205ENST00000434813 HNRNPUL2Q1KMD3 747 aaKnown RBP27.97■■■□□ 2.07
CLK1-205ENST00000434813 CARMIL1Q5VZK9 1371 aa27.94■■■□□ 2.06
CLK1-205ENST00000434813 MRC2Q9UBG0 1479 aa27.93■■■□□ 2.06
CLK1-205ENST00000434813 KANK4Q5T7N3 995 aaPredicted RBP27.85■■■□□ 2.05
CLK1-205ENST00000434813 WDR97A6NE52 1622 aa27.85■■■□□ 2.05
CLK1-205ENST00000434813 RRBP1Q9P2E9 1410 aaKnown RBP27.85■■■□□ 2.05
CLK1-205ENST00000434813 MAP3K1Q13233 1512 aa27.81■■■□□ 2.04
CLK1-205ENST00000434813 TDRD9Q8NDG6 1382 aaKnown RBP27.78■■■□□ 2.04
CLK1-205ENST00000434813 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
CLK1-205ENST00000434813 CUL7Q14999 1698 aa27.77■■■□□ 2.04
CLK1-205ENST00000434813 TIAM1Q13009 1591 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms