RNA–Protein interactions for RNA: ENST00000565953.5

MAN2C1-228, Transcript of mannosidase alpha class 2C member 1, humanhuman

TSL 3

Gene MAN2C1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAN2C1-228ENST00000565953 NISCHQ9Y2I1 1504 aa34.13■■■■□ 3.05
MAN2C1-228ENST00000565953 CCDC180Q9P1Z9 1646 aa30.68■■■□□ 2.5
MAN2C1-228ENST00000565953 ABCC9O60706 1549 aa30.65■■■□□ 2.5
MAN2C1-228ENST00000565953 RB1CC1Q8TDY2 1594 aa29.12■■■□□ 2.25
MAN2C1-228ENST00000565953 NACADO15069 1562 aa28.94■■■□□ 2.22
MAN2C1-228ENST00000565953 DNAJC5BQ9UF47 199 aa28.91■■■□□ 2.22
MAN2C1-228ENST00000565953 UNC13AQ9UPW8 1703 aa28.69■■■□□ 2.18
MAN2C1-228ENST00000565953 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
MAN2C1-228ENST00000565953 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
MAN2C1-228ENST00000565953 PABPN1Q86U42 306 aaKnown RBP eCLIP28.45■■■□□ 2.14
MAN2C1-228ENST00000565953 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
MAN2C1-228ENST00000565953 ZCCHC6Q5VYS8 1495 aaKnown RBP28.33■■■□□ 2.13
MAN2C1-228ENST00000565953 DCAF1Q9Y4B6 1507 aa28.21■■■□□ 2.11
MAN2C1-228ENST00000565953 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
MAN2C1-228ENST00000565953 SCRIBQ14160 1630 aa27.91■■■□□ 2.06
MAN2C1-228ENST00000565953 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
MAN2C1-228ENST00000565953 EIF4G1Q04637 1599 aaKnown RBP27.68■■■□□ 2.02
MAN2C1-228ENST00000565953 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
MAN2C1-228ENST00000565953 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
MAN2C1-228ENST00000565953 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
MAN2C1-228ENST00000565953 SMARCA4P51532 1647 aa26.66■■□□□ 1.86
MAN2C1-228ENST00000565953 HMGXB3Q12766 1538 aa26.58■■□□□ 1.85
MAN2C1-228ENST00000565953 SMARCA2P51531 1590 aa26.52■■□□□ 1.84
MAN2C1-228ENST00000565953 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
MAN2C1-228ENST00000565953 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
MAN2C1-228ENST00000565953 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
MAN2C1-228ENST00000565953 CUX2O14529 1486 aa26.42■■□□□ 1.82
MAN2C1-228ENST00000565953 NESP48681 1621 aa26.4■■□□□ 1.82
MAN2C1-228ENST00000565953 MROH2BQ7Z745 1585 aa26.35■■□□□ 1.81
MAN2C1-228ENST00000565953 ERCC6Q03468 1493 aa26.32■■□□□ 1.8
MAN2C1-228ENST00000565953 BAZ1BQ9UIG0 1483 aaKnown RBP26.32■■□□□ 1.8
MAN2C1-228ENST00000565953 THOC2Q8NI27 1593 aaKnown RBP26.21■■□□□ 1.79
MAN2C1-228ENST00000565953 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
MAN2C1-228ENST00000565953 KIF21AQ7Z4S6 1674 aa26.07■■□□□ 1.76
MAN2C1-228ENST00000565953 WIZO95785 1651 aa26.01■■□□□ 1.75
MAN2C1-228ENST00000565953 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
MAN2C1-228ENST00000565953 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
MAN2C1-228ENST00000565953 WDR62O43379 1518 aa25.77■■□□□ 1.72
MAN2C1-228ENST00000565953 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
MAN2C1-228ENST00000565953 RSF1Q96T23 1441 aaPredicted RBP25.73■■□□□ 1.71
MAN2C1-228ENST00000565953 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.7
MAN2C1-228ENST00000565953 CFTRP13569 1480 aa25.63■■□□□ 1.69
MAN2C1-228ENST00000565953 FANCD2Q9BXW9 1451 aa25.6■■□□□ 1.69
MAN2C1-228ENST00000565953 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
MAN2C1-228ENST00000565953 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
MAN2C1-228ENST00000565953 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
MAN2C1-228ENST00000565953 CCDC88BA6NC98 1476 aa25.34■■□□□ 1.65
MAN2C1-228ENST00000565953 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
MAN2C1-228ENST00000565953 TOPBP1Q92547 1522 aa25.16■■□□□ 1.62
MAN2C1-228ENST00000565953 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
MAN2C1-228ENST00000565953 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
MAN2C1-228ENST00000565953 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
MAN2C1-228ENST00000565953 EIF4G3O43432 1585 aaKnown RBP25.03■■□□□ 1.6
MAN2C1-228ENST00000565953 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
MAN2C1-228ENST00000565953 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
MAN2C1-228ENST00000565953 RIMBP3CA6NJZ7 1639 aa24.96■■□□□ 1.59
MAN2C1-228ENST00000565953 RIMBP3BA6NNM3 1639 aa24.96■■□□□ 1.59
MAN2C1-228ENST00000565953 RIMBP3Q9UFD9 1639 aa24.96■■□□□ 1.59
MAN2C1-228ENST00000565953 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
MAN2C1-228ENST00000565953 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.58
MAN2C1-228ENST00000565953 CHD1O14646 1710 aa24.86■■□□□ 1.57
MAN2C1-228ENST00000565953 AQRO60306 1485 aaKnown RBP eCLIP24.85■■□□□ 1.571e-12■■■□□ 16.1
MAN2C1-228ENST00000565953 ARHGEF11O15085 1522 aa24.85■■□□□ 1.57
MAN2C1-228ENST00000565953 RAD54L2Q9Y4B4 1467 aa24.8■■□□□ 1.56
MAN2C1-228ENST00000565953 CUX1P39880 1505 aa24.76■■□□□ 1.55
MAN2C1-228ENST00000565953 FGD5Q6ZNL6 1462 aa24.71■■□□□ 1.55
MAN2C1-228ENST00000565953 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
MAN2C1-228ENST00000565953 SOGA1O94964 1423 aa24.66■■□□□ 1.54
MAN2C1-228ENST00000565953 TDRD9Q8NDG6 1382 aaKnown RBP24.66■■□□□ 1.54
MAN2C1-228ENST00000565953 ARAP1Q96P48 1450 aa24.65■■□□□ 1.54
MAN2C1-228ENST00000565953 CLASP1Q7Z460 1538 aa24.61■■□□□ 1.53
MAN2C1-228ENST00000565953 SNAPC4Q5SXM2 1469 aa24.61■■□□□ 1.53
MAN2C1-228ENST00000565953 MAGI1Q96QZ7 1491 aaPredicted RBP24.51■■□□□ 1.51
MAN2C1-228ENST00000565953 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
MAN2C1-228ENST00000565953 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
MAN2C1-228ENST00000565953 GRIN2BQ13224 1484 aa24.48■■□□□ 1.51
MAN2C1-228ENST00000565953 CYB5RLQ6IPT4 315 aa24.47■■□□□ 1.51
MAN2C1-228ENST00000565953 FBLN2P98095 1184 aa24.44■■□□□ 1.5
MAN2C1-228ENST00000565953 ABCA10Q8WWZ4 1543 aa24.44■■□□□ 1.5
MAN2C1-228ENST00000565953 SYNJ2O15056 1496 aa24.44■■□□□ 1.5
MAN2C1-228ENST00000565953 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
MAN2C1-228ENST00000565953 GAPVD1Q14C86 1478 aa24.39■■□□□ 1.5
MAN2C1-228ENST00000565953 BIVM-ERCC5R4GMW8 1640 aa24.34■■□□□ 1.49
MAN2C1-228ENST00000565953 TOP2BQ02880 1626 aa24.3■■□□□ 1.48
MAN2C1-228ENST00000565953 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
MAN2C1-228ENST00000565953 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
MAN2C1-228ENST00000565953 SUPT5HO00267 1087 aaKnown RBP24.27■■□□□ 1.48
MAN2C1-228ENST00000565953 ERCC6L2Q5T890 1561 aa24.26■■□□□ 1.47
MAN2C1-228ENST00000565953 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
MAN2C1-228ENST00000565953 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
MAN2C1-228ENST00000565953 NUP160Q12769 1436 aa24.2■■□□□ 1.46
MAN2C1-228ENST00000565953 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.46
MAN2C1-228ENST00000565953 SHROOM2Q13796 1616 aa24.16■■□□□ 1.46
MAN2C1-228ENST00000565953 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
MAN2C1-228ENST00000565953 TRHP20396 242 aaPredicted RBP24.09■■□□□ 1.45
MAN2C1-228ENST00000565953 FHAD1B1AJZ9 1412 aa24.08■■□□□ 1.44
MAN2C1-228ENST00000565953 RUSC2Q8N2Y8 1516 aa23.96■■□□□ 1.43
MAN2C1-228ENST00000565953 KIF13AQ9H1H9 1805 aa23.86■■□□□ 1.41
MAN2C1-228ENST00000565953 PRG4Q92954 1404 aaPredicted RBP23.84■■□□□ 1.41
MAN2C1-228ENST00000565953 IGF1RP08069 1367 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms