Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
AP4B1Q9Y6B7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
AP4B1Q9Y6B7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
AP4B1Q9Y6B7 MIR6090-201ENST00000622481 60 ntBASIC23.71■■□□□ 1.39
AP4B1Q9Y6B7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
AP4B1Q9Y6B7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
AP4B1Q9Y6B7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
AP4B1Q9Y6B7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.7■■□□□ 1.38
AP4B1Q9Y6B7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
AP4B1Q9Y6B7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.7■■□□□ 1.38
AP4B1Q9Y6B7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.7■■□□□ 1.38
AP4B1Q9Y6B7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
AP4B1Q9Y6B7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
AP4B1Q9Y6B7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
AP4B1Q9Y6B7 AP004833.2-201ENST00000532228 1454 ntBASIC23.69■■□□□ 1.38
AP4B1Q9Y6B7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
AP4B1Q9Y6B7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
AP4B1Q9Y6B7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.69■■□□□ 1.38
AP4B1Q9Y6B7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.69■■□□□ 1.38
AP4B1Q9Y6B7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
AP4B1Q9Y6B7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.69■■□□□ 1.38
AP4B1Q9Y6B7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
AP4B1Q9Y6B7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.69■■□□□ 1.38
AP4B1Q9Y6B7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
AP4B1Q9Y6B7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.68■■□□□ 1.38
AP4B1Q9Y6B7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
AP4B1Q9Y6B7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
AP4B1Q9Y6B7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.67■■□□□ 1.38
AP4B1Q9Y6B7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
AP4B1Q9Y6B7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.66■■□□□ 1.38
AP4B1Q9Y6B7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.65■■□□□ 1.38
AP4B1Q9Y6B7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
AP4B1Q9Y6B7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
AP4B1Q9Y6B7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
AP4B1Q9Y6B7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
AP4B1Q9Y6B7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
AP4B1Q9Y6B7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.38
AP4B1Q9Y6B7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
AP4B1Q9Y6B7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
AP4B1Q9Y6B7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
AP4B1Q9Y6B7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
AP4B1Q9Y6B7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
AP4B1Q9Y6B7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
AP4B1Q9Y6B7 DUX4L29-201ENST00000425409 679 ntBASIC23.63■■□□□ 1.37
AP4B1Q9Y6B7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
AP4B1Q9Y6B7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
AP4B1Q9Y6B7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
AP4B1Q9Y6B7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.62■■□□□ 1.37
AP4B1Q9Y6B7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
AP4B1Q9Y6B7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
AP4B1Q9Y6B7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
AP4B1Q9Y6B7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.61■■□□□ 1.37
AP4B1Q9Y6B7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.61■■□□□ 1.37
AP4B1Q9Y6B7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.61■■□□□ 1.37
AP4B1Q9Y6B7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
AP4B1Q9Y6B7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.6■■□□□ 1.37
AP4B1Q9Y6B7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
AP4B1Q9Y6B7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
AP4B1Q9Y6B7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
AP4B1Q9Y6B7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.6■■□□□ 1.37
AP4B1Q9Y6B7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.6■■□□□ 1.37
AP4B1Q9Y6B7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.59■■□□□ 1.37
AP4B1Q9Y6B7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.59■■□□□ 1.37
AP4B1Q9Y6B7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.59■■□□□ 1.37
AP4B1Q9Y6B7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
AP4B1Q9Y6B7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
AP4B1Q9Y6B7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
AP4B1Q9Y6B7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
AP4B1Q9Y6B7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.59■■□□□ 1.37
AP4B1Q9Y6B7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
AP4B1Q9Y6B7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
AP4B1Q9Y6B7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
AP4B1Q9Y6B7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
AP4B1Q9Y6B7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
AP4B1Q9Y6B7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.57■■□□□ 1.36
AP4B1Q9Y6B7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
AP4B1Q9Y6B7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
AP4B1Q9Y6B7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
AP4B1Q9Y6B7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.56■■□□□ 1.36
AP4B1Q9Y6B7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.56■■□□□ 1.36
AP4B1Q9Y6B7 ABHD17AP4-201ENST00000411545 909 ntBASIC23.56■■□□□ 1.36
AP4B1Q9Y6B7 AC021231.2-201ENST00000594613 730 ntBASIC23.56■■□□□ 1.36
AP4B1Q9Y6B7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.56■■□□□ 1.36
AP4B1Q9Y6B7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
AP4B1Q9Y6B7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
AP4B1Q9Y6B7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
AP4B1Q9Y6B7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.56■■□□□ 1.36
AP4B1Q9Y6B7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
AP4B1Q9Y6B7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
AP4B1Q9Y6B7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
AP4B1Q9Y6B7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.55■■□□□ 1.36
AP4B1Q9Y6B7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
AP4B1Q9Y6B7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.54■■□□□ 1.36
AP4B1Q9Y6B7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
AP4B1Q9Y6B7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
AP4B1Q9Y6B7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
AP4B1Q9Y6B7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.54■■□□□ 1.36
AP4B1Q9Y6B7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
AP4B1Q9Y6B7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.54■■□□□ 1.36
AP4B1Q9Y6B7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms