Protein–RNA interactions for Protein: Q9Y279

VSIG4, V-set and immunoglobulin domain-containing protein 4, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4Q9Y279 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VSIG4Q9Y279 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VSIG4Q9Y279 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.96■□□□□ 0.95
VSIG4Q9Y279 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VSIG4Q9Y279 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.95■□□□□ 0.94
VSIG4Q9Y279 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSIG4Q9Y279 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VSIG4Q9Y279 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VSIG4Q9Y279 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.95■□□□□ 0.94
VSIG4Q9Y279 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.94■□□□□ 0.94
VSIG4Q9Y279 AC092803.2-201ENST00000564287 1899 ntBASIC20.94■□□□□ 0.94
VSIG4Q9Y279 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.94■□□□□ 0.94
VSIG4Q9Y279 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSIG4Q9Y279 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
VSIG4Q9Y279 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSIG4Q9Y279 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.94■□□□□ 0.94
VSIG4Q9Y279 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
VSIG4Q9Y279 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.93■□□□□ 0.94
VSIG4Q9Y279 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSIG4Q9Y279 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VSIG4Q9Y279 MIR762-201ENST00000390236 83 ntBASIC20.93■□□□□ 0.94
VSIG4Q9Y279 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSIG4Q9Y279 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VSIG4Q9Y279 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VSIG4Q9Y279 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VSIG4Q9Y279 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VSIG4Q9Y279 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VSIG4Q9Y279 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.91■□□□□ 0.94
VSIG4Q9Y279 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VSIG4Q9Y279 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.91■□□□□ 0.94
VSIG4Q9Y279 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VSIG4Q9Y279 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.9■□□□□ 0.94
VSIG4Q9Y279 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.9■□□□□ 0.94
VSIG4Q9Y279 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.9■□□□□ 0.94
VSIG4Q9Y279 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VSIG4Q9Y279 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VSIG4Q9Y279 MIR3665-201ENST00000578708 105 ntBASIC20.9■□□□□ 0.94
VSIG4Q9Y279 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VSIG4Q9Y279 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
VSIG4Q9Y279 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VSIG4Q9Y279 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VSIG4Q9Y279 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VSIG4Q9Y279 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.88■□□□□ 0.93
VSIG4Q9Y279 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VSIG4Q9Y279 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VSIG4Q9Y279 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.87■□□□□ 0.93
VSIG4Q9Y279 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VSIG4Q9Y279 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VSIG4Q9Y279 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VSIG4Q9Y279 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VSIG4Q9Y279 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VSIG4Q9Y279 AL162393.1-201ENST00000437852 946 ntBASIC20.86■□□□□ 0.93
VSIG4Q9Y279 AC005559.1-201ENST00000589661 871 ntBASIC20.86■□□□□ 0.93
VSIG4Q9Y279 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VSIG4Q9Y279 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VSIG4Q9Y279 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VSIG4Q9Y279 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
VSIG4Q9Y279 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
VSIG4Q9Y279 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VSIG4Q9Y279 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.84■□□□□ 0.93
VSIG4Q9Y279 RPS2P35-201ENST00000443417 897 ntBASIC20.84■□□□□ 0.93
VSIG4Q9Y279 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.84■□□□□ 0.93
VSIG4Q9Y279 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VSIG4Q9Y279 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
VSIG4Q9Y279 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VSIG4Q9Y279 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.83■□□□□ 0.93
VSIG4Q9Y279 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
VSIG4Q9Y279 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
VSIG4Q9Y279 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
VSIG4Q9Y279 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
VSIG4Q9Y279 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VSIG4Q9Y279 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.82■□□□□ 0.92
VSIG4Q9Y279 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.82■□□□□ 0.92
VSIG4Q9Y279 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VSIG4Q9Y279 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
VSIG4Q9Y279 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VSIG4Q9Y279 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VSIG4Q9Y279 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
VSIG4Q9Y279 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VSIG4Q9Y279 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VSIG4Q9Y279 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VSIG4Q9Y279 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.79■□□□□ 0.92
VSIG4Q9Y279 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
VSIG4Q9Y279 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.78■□□□□ 0.92
VSIG4Q9Y279 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSIG4Q9Y279 AP004609.3-201ENST00000610705 1884 ntBASIC20.78■□□□□ 0.92
VSIG4Q9Y279 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VSIG4Q9Y279 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSIG4Q9Y279 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms