Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
BLOC1S4Q9NUP1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
BLOC1S4Q9NUP1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
BLOC1S4Q9NUP1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
BLOC1S4Q9NUP1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
BLOC1S4Q9NUP1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
BLOC1S4Q9NUP1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.95■■■□□ 2.06
BLOC1S4Q9NUP1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
BLOC1S4Q9NUP1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
BLOC1S4Q9NUP1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
BLOC1S4Q9NUP1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
BLOC1S4Q9NUP1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
BLOC1S4Q9NUP1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.93■■■□□ 2.06
BLOC1S4Q9NUP1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.93■■■□□ 2.06
BLOC1S4Q9NUP1 AC148477.6-201ENST00000623746 465 ntBASIC27.93■■■□□ 2.06
BLOC1S4Q9NUP1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
BLOC1S4Q9NUP1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
BLOC1S4Q9NUP1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.92■■■□□ 2.06
BLOC1S4Q9NUP1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
BLOC1S4Q9NUP1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
BLOC1S4Q9NUP1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
BLOC1S4Q9NUP1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
BLOC1S4Q9NUP1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.92■■■□□ 2.06
BLOC1S4Q9NUP1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC27.91■■■□□ 2.06
BLOC1S4Q9NUP1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.91■■■□□ 2.06
BLOC1S4Q9NUP1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.91■■■□□ 2.06
BLOC1S4Q9NUP1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
BLOC1S4Q9NUP1 MIR219A2-201ENST00000608502 1504 ntBASIC27.91■■■□□ 2.06
BLOC1S4Q9NUP1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
BLOC1S4Q9NUP1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
BLOC1S4Q9NUP1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
BLOC1S4Q9NUP1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.9■■■□□ 2.06
BLOC1S4Q9NUP1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
BLOC1S4Q9NUP1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.89■■■□□ 2.06
BLOC1S4Q9NUP1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.89■■■□□ 2.06
BLOC1S4Q9NUP1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
BLOC1S4Q9NUP1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
BLOC1S4Q9NUP1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.88■■■□□ 2.05
BLOC1S4Q9NUP1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.88■■■□□ 2.05
BLOC1S4Q9NUP1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
BLOC1S4Q9NUP1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
BLOC1S4Q9NUP1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.87■■■□□ 2.05
BLOC1S4Q9NUP1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
BLOC1S4Q9NUP1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
BLOC1S4Q9NUP1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.86■■■□□ 2.05
BLOC1S4Q9NUP1 AL449106.1-201ENST00000608517 1980 ntBASIC27.86■■■□□ 2.05
BLOC1S4Q9NUP1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
BLOC1S4Q9NUP1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
BLOC1S4Q9NUP1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
BLOC1S4Q9NUP1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
BLOC1S4Q9NUP1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
BLOC1S4Q9NUP1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
BLOC1S4Q9NUP1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
BLOC1S4Q9NUP1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
BLOC1S4Q9NUP1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
BLOC1S4Q9NUP1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
BLOC1S4Q9NUP1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.83■■■□□ 2.04
BLOC1S4Q9NUP1 WHAMMP3-201ENST00000611636 1609 ntBASIC27.82■■■□□ 2.04
BLOC1S4Q9NUP1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.82■■■□□ 2.04
BLOC1S4Q9NUP1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
BLOC1S4Q9NUP1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
BLOC1S4Q9NUP1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
BLOC1S4Q9NUP1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.82■■■□□ 2.04
BLOC1S4Q9NUP1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
BLOC1S4Q9NUP1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.81■■■□□ 2.04
BLOC1S4Q9NUP1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
BLOC1S4Q9NUP1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.81■■■□□ 2.04
BLOC1S4Q9NUP1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.81■■■□□ 2.04
BLOC1S4Q9NUP1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
BLOC1S4Q9NUP1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.8■■■□□ 2.04
BLOC1S4Q9NUP1 MIR639-201ENST00000384974 98 ntBASIC27.8■■■□□ 2.04
BLOC1S4Q9NUP1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
BLOC1S4Q9NUP1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.8■■■□□ 2.04
BLOC1S4Q9NUP1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
BLOC1S4Q9NUP1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.8■■■□□ 2.04
BLOC1S4Q9NUP1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.8■■■□□ 2.04
BLOC1S4Q9NUP1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
BLOC1S4Q9NUP1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.79■■■□□ 2.04
BLOC1S4Q9NUP1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.79■■■□□ 2.04
BLOC1S4Q9NUP1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.79■■■□□ 2.04
BLOC1S4Q9NUP1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.79■■■□□ 2.04
BLOC1S4Q9NUP1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
BLOC1S4Q9NUP1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
BLOC1S4Q9NUP1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
BLOC1S4Q9NUP1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
BLOC1S4Q9NUP1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.77■■■□□ 2.04
BLOC1S4Q9NUP1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
BLOC1S4Q9NUP1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
BLOC1S4Q9NUP1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.04
BLOC1S4Q9NUP1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
BLOC1S4Q9NUP1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
BLOC1S4Q9NUP1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
BLOC1S4Q9NUP1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BLOC1S4Q9NUP1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
BLOC1S4Q9NUP1 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.75■■■□□ 2.03
BLOC1S4Q9NUP1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
BLOC1S4Q9NUP1 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.75■■■□□ 2.03
BLOC1S4Q9NUP1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
BLOC1S4Q9NUP1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.74■■■□□ 2.03
BLOC1S4Q9NUP1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms