Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GFI1Q99684 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
GFI1Q99684 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GFI1Q99684 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.59■■□□□ 1.05
GFI1Q99684 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GFI1Q99684 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GFI1Q99684 AC093323.1-202ENST00000635031 2045 ntBASIC21.58■■□□□ 1.05
GFI1Q99684 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GFI1Q99684 AP004609.3-201ENST00000610705 1884 ntBASIC21.58■■□□□ 1.05
GFI1Q99684 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
GFI1Q99684 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.58■■□□□ 1.05
GFI1Q99684 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GFI1Q99684 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GFI1Q99684 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GFI1Q99684 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.57■■□□□ 1.04
GFI1Q99684 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.57■■□□□ 1.04
GFI1Q99684 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
GFI1Q99684 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GFI1Q99684 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
GFI1Q99684 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.56■■□□□ 1.04
GFI1Q99684 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
GFI1Q99684 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
GFI1Q99684 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
GFI1Q99684 AC097358.2-201ENST00000607541 1159 ntBASIC21.56■■□□□ 1.04
GFI1Q99684 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
GFI1Q99684 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GFI1Q99684 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GFI1Q99684 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GFI1Q99684 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
GFI1Q99684 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
GFI1Q99684 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.53■■□□□ 1.04
GFI1Q99684 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
GFI1Q99684 LINC00273-201ENST00000539813 1452 ntBASIC21.53■■□□□ 1.04
GFI1Q99684 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.53■■□□□ 1.04
GFI1Q99684 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GFI1Q99684 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GFI1Q99684 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GFI1Q99684 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GFI1Q99684 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GFI1Q99684 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GFI1Q99684 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.52■■□□□ 1.04
GFI1Q99684 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GFI1Q99684 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
GFI1Q99684 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
GFI1Q99684 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
GFI1Q99684 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GFI1Q99684 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.51■■□□□ 1.03
GFI1Q99684 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.51■■□□□ 1.03
GFI1Q99684 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GFI1Q99684 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
GFI1Q99684 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GFI1Q99684 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.51■■□□□ 1.03
GFI1Q99684 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GFI1Q99684 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GFI1Q99684 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.5■■□□□ 1.03
GFI1Q99684 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.5■■□□□ 1.03
GFI1Q99684 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
GFI1Q99684 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GFI1Q99684 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.48■■□□□ 1.03
GFI1Q99684 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
GFI1Q99684 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GFI1Q99684 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GFI1Q99684 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GFI1Q99684 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
GFI1Q99684 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GFI1Q99684 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GFI1Q99684 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.47■■□□□ 1.03
GFI1Q99684 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.47■■□□□ 1.03
GFI1Q99684 MIR6090-201ENST00000622481 60 ntBASIC21.47■■□□□ 1.03
GFI1Q99684 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GFI1Q99684 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.47■■□□□ 1.03
GFI1Q99684 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.46■■□□□ 1.03
GFI1Q99684 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GFI1Q99684 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GFI1Q99684 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GFI1Q99684 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GFI1Q99684 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
GFI1Q99684 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GFI1Q99684 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GFI1Q99684 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GFI1Q99684 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GFI1Q99684 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
GFI1Q99684 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GFI1Q99684 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
GFI1Q99684 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.43■■□□□ 1.02
GFI1Q99684 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GFI1Q99684 AC142472.1-201ENST00000612013 1741 ntBASIC21.43■■□□□ 1.02
GFI1Q99684 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.43■■□□□ 1.02
GFI1Q99684 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
GFI1Q99684 AC108673.1-201ENST00000510422 1159 ntBASIC21.42■■□□□ 1.02
GFI1Q99684 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.42■■□□□ 1.02
GFI1Q99684 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.42■■□□□ 1.02
GFI1Q99684 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
GFI1Q99684 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GFI1Q99684 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.4■■□□□ 1.02
GFI1Q99684 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GFI1Q99684 AC005559.1-201ENST00000589661 871 ntBASIC21.4■■□□□ 1.02
GFI1Q99684 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.4■■□□□ 1.02
GFI1Q99684 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GFI1Q99684 ERN1-208ENST00000606895 2068 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms