Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.69■■□□□ 1.22
SNRNP40Q96DI7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.69■■□□□ 1.22
SNRNP40Q96DI7 AC100797.4-201ENST00000631653 1827 ntBASIC22.69■■□□□ 1.22
SNRNP40Q96DI7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SNRNP40Q96DI7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.69■■□□□ 1.22
SNRNP40Q96DI7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
SNRNP40Q96DI7 DUX4L9-201ENST00000449051 1259 ntBASIC22.69■■□□□ 1.22
SNRNP40Q96DI7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.69■■□□□ 1.22
SNRNP40Q96DI7 BHLHE23-202ENST00000612929 1109 ntBASIC22.69■■□□□ 1.22
SNRNP40Q96DI7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.68■■□□□ 1.22
SNRNP40Q96DI7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SNRNP40Q96DI7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SNRNP40Q96DI7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
SNRNP40Q96DI7 AC025884.2-201ENST00000553429 711 ntBASIC22.68■■□□□ 1.22
SNRNP40Q96DI7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
SNRNP40Q96DI7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SNRNP40Q96DI7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SNRNP40Q96DI7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SNRNP40Q96DI7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
SNRNP40Q96DI7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SNRNP40Q96DI7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SNRNP40Q96DI7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SNRNP40Q96DI7 RP9P-202ENST00000450133 1212 ntBASIC22.67■■□□□ 1.22
SNRNP40Q96DI7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SNRNP40Q96DI7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.67■■□□□ 1.22
SNRNP40Q96DI7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SNRNP40Q96DI7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SNRNP40Q96DI7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.66■■□□□ 1.22
SNRNP40Q96DI7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SNRNP40Q96DI7 AC010980.1-201ENST00000587192 1142 ntBASIC22.65■■□□□ 1.22
SNRNP40Q96DI7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SNRNP40Q96DI7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SNRNP40Q96DI7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SNRNP40Q96DI7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.64■■□□□ 1.21
SNRNP40Q96DI7 AC093536.1-201ENST00000569153 554 ntBASIC22.64■■□□□ 1.21
SNRNP40Q96DI7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SNRNP40Q96DI7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.64■■□□□ 1.21
SNRNP40Q96DI7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
SNRNP40Q96DI7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNRNP40Q96DI7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.63■■□□□ 1.21
SNRNP40Q96DI7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.63■■□□□ 1.21
SNRNP40Q96DI7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNRNP40Q96DI7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SNRNP40Q96DI7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNRNP40Q96DI7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNRNP40Q96DI7 AC074183.2-201ENST00000623112 922 ntBASIC22.62■■□□□ 1.21
SNRNP40Q96DI7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNRNP40Q96DI7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNRNP40Q96DI7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SNRNP40Q96DI7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.61■■□□□ 1.21
SNRNP40Q96DI7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.61■■□□□ 1.21
SNRNP40Q96DI7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNRNP40Q96DI7 SPCS2P3-201ENST00000500401 656 ntBASIC22.61■■□□□ 1.21
SNRNP40Q96DI7 KRT8P33-201ENST00000508125 1423 ntBASIC22.61■■□□□ 1.21
SNRNP40Q96DI7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.61■■□□□ 1.21
SNRNP40Q96DI7 RAP2CP1-202ENST00000605179 643 ntBASIC22.61■■□□□ 1.21
SNRNP40Q96DI7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNRNP40Q96DI7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNRNP40Q96DI7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNRNP40Q96DI7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNRNP40Q96DI7 ST7-AS1-201ENST00000456775 1889 ntBASIC22.6■■□□□ 1.21
SNRNP40Q96DI7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SNRNP40Q96DI7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.59■■□□□ 1.21
SNRNP40Q96DI7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.59■■□□□ 1.21
SNRNP40Q96DI7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.59■■□□□ 1.21
SNRNP40Q96DI7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNRNP40Q96DI7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.59■■□□□ 1.21
SNRNP40Q96DI7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
SNRNP40Q96DI7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNRNP40Q96DI7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNRNP40Q96DI7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.58■■□□□ 1.21
SNRNP40Q96DI7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.58■■□□□ 1.21
SNRNP40Q96DI7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNRNP40Q96DI7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
SNRNP40Q96DI7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SNRNP40Q96DI7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SNRNP40Q96DI7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.57■■□□□ 1.2
SNRNP40Q96DI7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.57■■□□□ 1.2
SNRNP40Q96DI7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.57■■□□□ 1.2
SNRNP40Q96DI7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNRNP40Q96DI7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
SNRNP40Q96DI7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SNRNP40Q96DI7 AL592295.1-201ENST00000400984 884 ntBASIC22.56■■□□□ 1.2
SNRNP40Q96DI7 AC139795.1-202ENST00000500444 432 ntBASIC22.56■■□□□ 1.2
SNRNP40Q96DI7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SNRNP40Q96DI7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.56■■□□□ 1.2
SNRNP40Q96DI7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SNRNP40Q96DI7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SNRNP40Q96DI7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.55■■□□□ 1.2
SNRNP40Q96DI7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SNRNP40Q96DI7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SNRNP40Q96DI7 MIR6765-201ENST00000614092 87 ntBASIC22.55■■□□□ 1.2
SNRNP40Q96DI7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SNRNP40Q96DI7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SNRNP40Q96DI7 YBX1P4-201ENST00000392794 808 ntBASIC22.54■■□□□ 1.2
SNRNP40Q96DI7 AC009299.2-201ENST00000482477 511 ntBASIC22.54■■□□□ 1.2
SNRNP40Q96DI7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.54■■□□□ 1.2
SNRNP40Q96DI7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SNRNP40Q96DI7 MIR3960-201ENST00000583311 91 ntBASIC22.54■■□□□ 1.2
SNRNP40Q96DI7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms