Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC38.6■■■■□ 3.77
CDC42BPAQ5VT25 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC38.59■■■■□ 3.77
CDC42BPAQ5VT25 DUX4L9-201ENST00000449051 1259 ntBASIC38.59■■■■□ 3.77
CDC42BPAQ5VT25 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
CDC42BPAQ5VT25 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC38.58■■■■□ 3.77
CDC42BPAQ5VT25 AC093536.1-201ENST00000569153 554 ntBASIC38.58■■■■□ 3.77
CDC42BPAQ5VT25 RAP2CP1-202ENST00000605179 643 ntBASIC38.58■■■■□ 3.77
CDC42BPAQ5VT25 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC38.58■■■■□ 3.77
CDC42BPAQ5VT25 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC38.58■■■■□ 3.77
CDC42BPAQ5VT25 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC38.58■■■■□ 3.77
CDC42BPAQ5VT25 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC38.57■■■■□ 3.77
CDC42BPAQ5VT25 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC38.57■■■■□ 3.76
CDC42BPAQ5VT25 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
CDC42BPAQ5VT25 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
CDC42BPAQ5VT25 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC38.56■■■■□ 3.76
CDC42BPAQ5VT25 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC38.56■■■■□ 3.76
CDC42BPAQ5VT25 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC38.56■■■■□ 3.76
CDC42BPAQ5VT25 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC38.56■■■■□ 3.76
CDC42BPAQ5VT25 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC38.56■■■■□ 3.76
CDC42BPAQ5VT25 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
CDC42BPAQ5VT25 SPCS2P3-201ENST00000500401 656 ntBASIC38.55■■■■□ 3.76
CDC42BPAQ5VT25 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC38.55■■■■□ 3.76
CDC42BPAQ5VT25 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC38.55■■■■□ 3.76
CDC42BPAQ5VT25 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
CDC42BPAQ5VT25 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
CDC42BPAQ5VT25 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC38.55■■■■□ 3.76
CDC42BPAQ5VT25 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC38.55■■■■□ 3.76
CDC42BPAQ5VT25 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC38.55■■■■□ 3.76
CDC42BPAQ5VT25 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC38.55■■■■□ 3.76
CDC42BPAQ5VT25 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC38.54■■■■□ 3.76
CDC42BPAQ5VT25 AC026202.3-201ENST00000600805 1127 ntBASIC38.54■■■■□ 3.76
CDC42BPAQ5VT25 SMPD5-203ENST00000639008 1464 ntBASIC38.53■■■■□ 3.76
CDC42BPAQ5VT25 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC38.53■■■■□ 3.76
CDC42BPAQ5VT25 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC38.53■■■■□ 3.76
CDC42BPAQ5VT25 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC38.53■■■■□ 3.76
CDC42BPAQ5VT25 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
CDC42BPAQ5VT25 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC38.52■■■■□ 3.76
CDC42BPAQ5VT25 AL359258.2-201ENST00000564063 1566 ntBASIC38.52■■■■□ 3.76
CDC42BPAQ5VT25 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC38.52■■■■□ 3.76
CDC42BPAQ5VT25 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC38.51■■■■□ 3.76
CDC42BPAQ5VT25 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC38.5■■■■□ 3.75
CDC42BPAQ5VT25 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
CDC42BPAQ5VT25 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC38.5■■■■□ 3.75
CDC42BPAQ5VT25 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC38.49■■■■□ 3.75
CDC42BPAQ5VT25 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC38.49■■■■□ 3.75
CDC42BPAQ5VT25 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC38.49■■■■□ 3.75
CDC42BPAQ5VT25 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
CDC42BPAQ5VT25 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC38.49■■■■□ 3.75
CDC42BPAQ5VT25 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC38.49■■■■□ 3.75
CDC42BPAQ5VT25 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
CDC42BPAQ5VT25 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
CDC42BPAQ5VT25 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC38.47■■■■□ 3.75
CDC42BPAQ5VT25 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
CDC42BPAQ5VT25 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC38.47■■■■□ 3.75
CDC42BPAQ5VT25 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
CDC42BPAQ5VT25 DUX4L18-201ENST00000553347 1267 ntBASIC38.46■■■■□ 3.75
CDC42BPAQ5VT25 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
CDC42BPAQ5VT25 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
CDC42BPAQ5VT25 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
CDC42BPAQ5VT25 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
CDC42BPAQ5VT25 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC38.44■■■■□ 3.74
CDC42BPAQ5VT25 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC38.43■■■■□ 3.74
CDC42BPAQ5VT25 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
CDC42BPAQ5VT25 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC38.43■■■■□ 3.74
CDC42BPAQ5VT25 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC38.42■■■■□ 3.74
CDC42BPAQ5VT25 RP9P-202ENST00000450133 1212 ntBASIC38.42■■■■□ 3.74
CDC42BPAQ5VT25 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC38.42■■■■□ 3.74
CDC42BPAQ5VT25 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC38.42■■■■□ 3.74
CDC42BPAQ5VT25 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC38.4■■■■□ 3.74
CDC42BPAQ5VT25 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC38.4■■■■□ 3.74
CDC42BPAQ5VT25 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC38.4■■■■□ 3.74
CDC42BPAQ5VT25 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
CDC42BPAQ5VT25 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC38.4■■■■□ 3.74
CDC42BPAQ5VT25 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC38.4■■■■□ 3.74
CDC42BPAQ5VT25 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC38.39■■■■□ 3.74
CDC42BPAQ5VT25 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC38.39■■■■□ 3.74
CDC42BPAQ5VT25 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC38.38■■■■□ 3.74
CDC42BPAQ5VT25 AP002414.2-202ENST00000590929 1450 ntBASIC38.38■■■■□ 3.73
CDC42BPAQ5VT25 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC38.37■■■■□ 3.73
CDC42BPAQ5VT25 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC38.37■■■■□ 3.73
CDC42BPAQ5VT25 ABCB10P3-201ENST00000561950 2166 ntBASIC38.37■■■■□ 3.73
CDC42BPAQ5VT25 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC38.37■■■■□ 3.73
CDC42BPAQ5VT25 AL035685.1-201ENST00000636663 812 ntBASIC38.37■■■■□ 3.73
CDC42BPAQ5VT25 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC38.37■■■■□ 3.73
CDC42BPAQ5VT25 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
CDC42BPAQ5VT25 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC38.36■■■■□ 3.73
CDC42BPAQ5VT25 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC38.36■■■■□ 3.73
CDC42BPAQ5VT25 PFN2-211ENST00000489155 636 ntTSL 4 BASIC38.35■■■■□ 3.73
CDC42BPAQ5VT25 BEX3-202ENST00000372634 753 ntTSL 2 BASIC38.35■■■■□ 3.73
CDC42BPAQ5VT25 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC38.35■■■■□ 3.73
CDC42BPAQ5VT25 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
CDC42BPAQ5VT25 TRIR-205ENST00000592273 783 ntTSL 3 BASIC38.34■■■■□ 3.73
CDC42BPAQ5VT25 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC38.34■■■■□ 3.73
CDC42BPAQ5VT25 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC38.33■■■■□ 3.73
CDC42BPAQ5VT25 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC38.33■■■■□ 3.73
CDC42BPAQ5VT25 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC38.32■■■■□ 3.73
CDC42BPAQ5VT25 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC38.32■■■■□ 3.72
CDC42BPAQ5VT25 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC38.32■■■■□ 3.72
CDC42BPAQ5VT25 AL139393.2-201ENST00000608721 2025 ntBASIC38.31■■■■□ 3.72
CDC42BPAQ5VT25 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC38.31■■■■□ 3.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms