Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.18■□□□□ 0.34
VPS13DQ5THJ4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.18■□□□□ 0.34
VPS13DQ5THJ4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.17■□□□□ 0.34
VPS13DQ5THJ4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
VPS13DQ5THJ4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.17■□□□□ 0.34
VPS13DQ5THJ4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
VPS13DQ5THJ4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS13DQ5THJ4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
VPS13DQ5THJ4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.17■□□□□ 0.34
VPS13DQ5THJ4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VPS13DQ5THJ4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS13DQ5THJ4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.16■□□□□ 0.34
VPS13DQ5THJ4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS13DQ5THJ4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.16■□□□□ 0.34
VPS13DQ5THJ4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS13DQ5THJ4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS13DQ5THJ4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS13DQ5THJ4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.15■□□□□ 0.34
VPS13DQ5THJ4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.15■□□□□ 0.34
VPS13DQ5THJ4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS13DQ5THJ4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS13DQ5THJ4 RP9P-202ENST00000450133 1212 ntBASIC17.15■□□□□ 0.34
VPS13DQ5THJ4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VPS13DQ5THJ4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VPS13DQ5THJ4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
VPS13DQ5THJ4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.14■□□□□ 0.33
VPS13DQ5THJ4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.14■□□□□ 0.33
VPS13DQ5THJ4 ST7-AS1-201ENST00000456775 1889 ntBASIC17.14■□□□□ 0.33
VPS13DQ5THJ4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VPS13DQ5THJ4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.14■□□□□ 0.33
VPS13DQ5THJ4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.14■□□□□ 0.33
VPS13DQ5THJ4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS13DQ5THJ4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS13DQ5THJ4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS13DQ5THJ4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS13DQ5THJ4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VPS13DQ5THJ4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VPS13DQ5THJ4 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.12■□□□□ 0.33
VPS13DQ5THJ4 AC009299.2-201ENST00000482477 511 ntBASIC17.12■□□□□ 0.33
VPS13DQ5THJ4 SMPD5-203ENST00000639008 1464 ntBASIC17.12■□□□□ 0.33
VPS13DQ5THJ4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VPS13DQ5THJ4 AC010980.1-201ENST00000587192 1142 ntBASIC17.11■□□□□ 0.33
VPS13DQ5THJ4 AL359258.2-201ENST00000564063 1566 ntBASIC17.11■□□□□ 0.33
VPS13DQ5THJ4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.11■□□□□ 0.33
VPS13DQ5THJ4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VPS13DQ5THJ4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS13DQ5THJ4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VPS13DQ5THJ4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS13DQ5THJ4 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.1■□□□□ 0.33
VPS13DQ5THJ4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13DQ5THJ4 KRT8P33-201ENST00000508125 1423 ntBASIC17.09■□□□□ 0.33
VPS13DQ5THJ4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VPS13DQ5THJ4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13DQ5THJ4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13DQ5THJ4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VPS13DQ5THJ4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
VPS13DQ5THJ4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS13DQ5THJ4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.08■□□□□ 0.33
VPS13DQ5THJ4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
VPS13DQ5THJ4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VPS13DQ5THJ4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VPS13DQ5THJ4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.08■□□□□ 0.32
VPS13DQ5THJ4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
VPS13DQ5THJ4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS13DQ5THJ4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS13DQ5THJ4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.07■□□□□ 0.32
VPS13DQ5THJ4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS13DQ5THJ4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS13DQ5THJ4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS13DQ5THJ4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS13DQ5THJ4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
VPS13DQ5THJ4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.06■□□□□ 0.32
VPS13DQ5THJ4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS13DQ5THJ4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS13DQ5THJ4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VPS13DQ5THJ4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS13DQ5THJ4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS13DQ5THJ4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS13DQ5THJ4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.05■□□□□ 0.32
VPS13DQ5THJ4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VPS13DQ5THJ4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS13DQ5THJ4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
VPS13DQ5THJ4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS13DQ5THJ4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS13DQ5THJ4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS13DQ5THJ4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS13DQ5THJ4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS13DQ5THJ4 PVT1_1.1-201ENST00000615125 194 ntBASIC17.04■□□□□ 0.32
VPS13DQ5THJ4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VPS13DQ5THJ4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
VPS13DQ5THJ4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS13DQ5THJ4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13DQ5THJ4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13DQ5THJ4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS13DQ5THJ4 AC019069.1-201ENST00000610008 1333 ntBASIC17.03■□□□□ 0.32
VPS13DQ5THJ4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS13DQ5THJ4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS13DQ5THJ4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VPS13DQ5THJ4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
VPS13DQ5THJ4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms