Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.58■□□□□ 0.72
CDC34P49427 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CDC34P49427 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.58■□□□□ 0.72
CDC34P49427 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC34P49427 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC34P49427 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC34P49427 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.57■□□□□ 0.72
CDC34P49427 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDC34P49427 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.57■□□□□ 0.72
CDC34P49427 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.56■□□□□ 0.72
CDC34P49427 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC34P49427 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC34P49427 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDC34P49427 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDC34P49427 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDC34P49427 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDC34P49427 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDC34P49427 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDC34P49427 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.55■□□□□ 0.72
CDC34P49427 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDC34P49427 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDC34P49427 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.54■□□□□ 0.72
CDC34P49427 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.54■□□□□ 0.72
CDC34P49427 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CDC34P49427 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC34P49427 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDC34P49427 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDC34P49427 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC34P49427 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDC34P49427 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDC34P49427 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CDC34P49427 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC34P49427 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CDC34P49427 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.52■□□□□ 0.72
CDC34P49427 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC34P49427 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.52■□□□□ 0.72
CDC34P49427 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDC34P49427 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDC34P49427 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC34P49427 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.51■□□□□ 0.71
CDC34P49427 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC34P49427 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC34P49427 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDC34P49427 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDC34P49427 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDC34P49427 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDC34P49427 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC34P49427 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC34P49427 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.49■□□□□ 0.71
CDC34P49427 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC34P49427 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.49■□□□□ 0.71
CDC34P49427 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDC34P49427 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDC34P49427 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.48■□□□□ 0.71
CDC34P49427 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDC34P49427 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC34P49427 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC34P49427 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDC34P49427 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.47■□□□□ 0.71
CDC34P49427 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.47■□□□□ 0.71
CDC34P49427 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC34P49427 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CDC34P49427 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC34P49427 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDC34P49427 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.46■□□□□ 0.71
CDC34P49427 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC34P49427 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.46■□□□□ 0.71
CDC34P49427 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC34P49427 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC34P49427 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDC34P49427 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDC34P49427 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC34P49427 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.45■□□□□ 0.7
CDC34P49427 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDC34P49427 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC34P49427 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC34P49427 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC34P49427 AP004609.3-201ENST00000610705 1884 ntBASIC19.44■□□□□ 0.7
CDC34P49427 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC34P49427 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC34P49427 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC34P49427 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC34P49427 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC34P49427 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC34P49427 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC34P49427 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC34P49427 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC34P49427 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC34P49427 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC34P49427 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDC34P49427 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC34P49427 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC34P49427 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDC34P49427 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.42■□□□□ 0.7
CDC34P49427 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC34P49427 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC34P49427 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC34P49427 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDC34P49427 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDC34P49427 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms