Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL359258.2-201ENST00000564063 1566 ntBASIC33.68■■■□□ 2.98
COL5A2P05997 RAP2CP1-202ENST00000605179 643 ntBASIC33.68■■■□□ 2.98
COL5A2P05997 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC33.67■■■□□ 2.98
COL5A2P05997 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC33.66■■■□□ 2.98
COL5A2P05997 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
COL5A2P05997 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
COL5A2P05997 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC33.65■■■□□ 2.98
COL5A2P05997 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
COL5A2P05997 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
COL5A2P05997 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC33.65■■■□□ 2.98
COL5A2P05997 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
COL5A2P05997 AC093536.1-201ENST00000569153 554 ntBASIC33.64■■■□□ 2.98
COL5A2P05997 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
COL5A2P05997 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC33.64■■■□□ 2.98
COL5A2P05997 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
COL5A2P05997 RP9P-202ENST00000450133 1212 ntBASIC33.63■■■□□ 2.97
COL5A2P05997 AC010980.1-201ENST00000587192 1142 ntBASIC33.63■■■□□ 2.97
COL5A2P05997 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
COL5A2P05997 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC33.63■■■□□ 2.97
COL5A2P05997 AC009299.2-201ENST00000482477 511 ntBASIC33.63■■■□□ 2.97
COL5A2P05997 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC33.63■■■□□ 2.97
COL5A2P05997 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
COL5A2P05997 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
COL5A2P05997 AL592295.1-201ENST00000400984 884 ntBASIC33.62■■■□□ 2.97
COL5A2P05997 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC33.62■■■□□ 2.97
COL5A2P05997 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC33.62■■■□□ 2.97
COL5A2P05997 AP004833.2-201ENST00000532228 1454 ntBASIC33.61■■■□□ 2.97
COL5A2P05997 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
COL5A2P05997 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
COL5A2P05997 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
COL5A2P05997 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC33.6■■■□□ 2.97
COL5A2P05997 BEX3-202ENST00000372634 753 ntTSL 2 BASIC33.6■■■□□ 2.97
COL5A2P05997 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
COL5A2P05997 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
COL5A2P05997 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.97
COL5A2P05997 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC33.59■■■□□ 2.97
COL5A2P05997 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC33.59■■■□□ 2.97
COL5A2P05997 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC33.59■■■□□ 2.97
COL5A2P05997 KRT8P33-201ENST00000508125 1423 ntBASIC33.58■■■□□ 2.97
COL5A2P05997 AC100797.4-201ENST00000631653 1827 ntBASIC33.58■■■□□ 2.97
COL5A2P05997 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC33.57■■■□□ 2.97
COL5A2P05997 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC33.57■■■□□ 2.97
COL5A2P05997 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC33.57■■■□□ 2.96
COL5A2P05997 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
COL5A2P05997 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC33.57■■■□□ 2.96
COL5A2P05997 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC33.57■■■□□ 2.96
COL5A2P05997 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
COL5A2P05997 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
COL5A2P05997 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC33.56■■■□□ 2.96
COL5A2P05997 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
COL5A2P05997 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC33.56■■■□□ 2.96
COL5A2P05997 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
COL5A2P05997 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
COL5A2P05997 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC33.55■■■□□ 2.96
COL5A2P05997 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC33.55■■■□□ 2.96
COL5A2P05997 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC33.55■■■□□ 2.96
COL5A2P05997 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC33.54■■■□□ 2.96
COL5A2P05997 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC33.54■■■□□ 2.96
COL5A2P05997 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC33.54■■■□□ 2.96
COL5A2P05997 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
COL5A2P05997 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
COL5A2P05997 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
COL5A2P05997 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC33.54■■■□□ 2.96
COL5A2P05997 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
COL5A2P05997 AC103834.1-201ENST00000520383 144 ntBASIC33.52■■■□□ 2.96
COL5A2P05997 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
COL5A2P05997 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC33.51■■■□□ 2.95
COL5A2P05997 PVT1_1.1-201ENST00000615125 194 ntBASIC33.5■■■□□ 2.95
COL5A2P05997 AC074183.2-201ENST00000623112 922 ntBASIC33.5■■■□□ 2.95
COL5A2P05997 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC33.5■■■□□ 2.95
COL5A2P05997 AC019069.1-201ENST00000610008 1333 ntBASIC33.5■■■□□ 2.95
COL5A2P05997 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC33.49■■■□□ 2.95
COL5A2P05997 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC33.49■■■□□ 2.95
COL5A2P05997 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC33.48■■■□□ 2.95
COL5A2P05997 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC33.48■■■□□ 2.95
COL5A2P05997 BHLHE23-202ENST00000612929 1109 ntBASIC33.48■■■□□ 2.95
COL5A2P05997 MIR6765-201ENST00000614092 87 ntBASIC33.48■■■□□ 2.95
COL5A2P05997 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
COL5A2P05997 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC33.47■■■□□ 2.95
COL5A2P05997 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
COL5A2P05997 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC33.46■■■□□ 2.95
COL5A2P05997 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
COL5A2P05997 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
COL5A2P05997 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
COL5A2P05997 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
COL5A2P05997 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC33.45■■■□□ 2.95
COL5A2P05997 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
COL5A2P05997 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC33.45■■■□□ 2.94
COL5A2P05997 GUSBP5-201ENST00000418136 578 ntBASIC33.44■■■□□ 2.94
COL5A2P05997 PFN2-211ENST00000489155 636 ntTSL 4 BASIC33.44■■■□□ 2.94
COL5A2P05997 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC33.44■■■□□ 2.94
COL5A2P05997 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC33.44■■■□□ 2.94
COL5A2P05997 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
COL5A2P05997 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC33.44■■■□□ 2.94
COL5A2P05997 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
COL5A2P05997 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
COL5A2P05997 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC33.43■■■□□ 2.94
COL5A2P05997 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC33.43■■■□□ 2.94
COL5A2P05997 ST7-AS1-201ENST00000456775 1889 ntBASIC33.43■■■□□ 2.94
COL5A2P05997 HES6-204ENST00000409182 863 ntTSL 2 BASIC33.43■■■□□ 2.94
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms