Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPDEFO95238 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
SPDEFO95238 AP006261.1-201ENST00000584783 668 ntBASIC20.89■□□□□ 0.93
SPDEFO95238 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPDEFO95238 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SPDEFO95238 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDEFO95238 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDEFO95238 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
SPDEFO95238 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDEFO95238 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDEFO95238 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDEFO95238 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.88■□□□□ 0.93
SPDEFO95238 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.88■□□□□ 0.93
SPDEFO95238 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPDEFO95238 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDEFO95238 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDEFO95238 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPDEFO95238 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPDEFO95238 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SPDEFO95238 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.86■□□□□ 0.93
SPDEFO95238 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPDEFO95238 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.86■□□□□ 0.93
SPDEFO95238 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
SPDEFO95238 MIR3665-201ENST00000578708 105 ntBASIC20.86■□□□□ 0.93
SPDEFO95238 AC145676.1-201ENST00000514988 2004 ntBASIC20.86■□□□□ 0.93
SPDEFO95238 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDEFO95238 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDEFO95238 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDEFO95238 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDEFO95238 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDEFO95238 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDEFO95238 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDEFO95238 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SPDEFO95238 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.85■□□□□ 0.93
SPDEFO95238 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDEFO95238 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SPDEFO95238 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.85■□□□□ 0.93
SPDEFO95238 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDEFO95238 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDEFO95238 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPDEFO95238 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDEFO95238 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.84■□□□□ 0.93
SPDEFO95238 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDEFO95238 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.84■□□□□ 0.93
SPDEFO95238 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPDEFO95238 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SPDEFO95238 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SPDEFO95238 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPDEFO95238 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SPDEFO95238 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.82■□□□□ 0.92
SPDEFO95238 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.82■□□□□ 0.92
SPDEFO95238 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SPDEFO95238 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SPDEFO95238 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.82■□□□□ 0.92
SPDEFO95238 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SPDEFO95238 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPDEFO95238 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPDEFO95238 DUX4L28-201ENST00000623687 678 ntBASIC20.81■□□□□ 0.92
SPDEFO95238 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.81■□□□□ 0.92
SPDEFO95238 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPDEFO95238 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.81■□□□□ 0.92
SPDEFO95238 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPDEFO95238 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPDEFO95238 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPDEFO95238 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPDEFO95238 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.8■□□□□ 0.92
SPDEFO95238 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.8■□□□□ 0.92
SPDEFO95238 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPDEFO95238 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.79■□□□□ 0.92
SPDEFO95238 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.79■□□□□ 0.92
SPDEFO95238 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPDEFO95238 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPDEFO95238 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.78■□□□□ 0.92
SPDEFO95238 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPDEFO95238 AC108673.1-201ENST00000510422 1159 ntBASIC20.78■□□□□ 0.92
SPDEFO95238 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPDEFO95238 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPDEFO95238 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPDEFO95238 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.77■□□□□ 0.92
SPDEFO95238 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDEFO95238 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.77■□□□□ 0.92
SPDEFO95238 AP004833.2-201ENST00000532228 1454 ntBASIC20.77■□□□□ 0.92
SPDEFO95238 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.77■□□□□ 0.92
SPDEFO95238 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDEFO95238 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SPDEFO95238 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDEFO95238 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDEFO95238 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDEFO95238 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDEFO95238 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDEFO95238 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDEFO95238 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDEFO95238 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDEFO95238 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDEFO95238 AC127502.1-201ENST00000399971 1502 ntBASIC20.75■□□□□ 0.91
SPDEFO95238 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.75■□□□□ 0.91
SPDEFO95238 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDEFO95238 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.75■□□□□ 0.91
SPDEFO95238 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPDEFO95238 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms