Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SHISA7A6NL88 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.63■■□□□ 1.69
SHISA7A6NL88 RAP2CP1-202ENST00000605179 643 ntBASIC25.63■■□□□ 1.69
SHISA7A6NL88 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SHISA7A6NL88 ST7-AS1-201ENST00000456775 1889 ntBASIC25.63■■□□□ 1.69
SHISA7A6NL88 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.63■■□□□ 1.69
SHISA7A6NL88 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.63■■□□□ 1.69
SHISA7A6NL88 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SHISA7A6NL88 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
SHISA7A6NL88 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
SHISA7A6NL88 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.62■■□□□ 1.69
SHISA7A6NL88 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHISA7A6NL88 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.61■■□□□ 1.69
SHISA7A6NL88 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
SHISA7A6NL88 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHISA7A6NL88 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHISA7A6NL88 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHISA7A6NL88 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.61■■□□□ 1.69
SHISA7A6NL88 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.6■■□□□ 1.69
SHISA7A6NL88 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.6■■□□□ 1.69
SHISA7A6NL88 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.6■■□□□ 1.69
SHISA7A6NL88 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
SHISA7A6NL88 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
SHISA7A6NL88 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.6■■□□□ 1.69
SHISA7A6NL88 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
SHISA7A6NL88 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
SHISA7A6NL88 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
SHISA7A6NL88 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHISA7A6NL88 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.59■■□□□ 1.69
SHISA7A6NL88 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.59■■□□□ 1.69
SHISA7A6NL88 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SHISA7A6NL88 RP9P-202ENST00000450133 1212 ntBASIC25.58■■□□□ 1.69
SHISA7A6NL88 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SHISA7A6NL88 AC010980.1-201ENST00000587192 1142 ntBASIC25.57■■□□□ 1.68
SHISA7A6NL88 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.57■■□□□ 1.68
SHISA7A6NL88 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.56■■□□□ 1.68
SHISA7A6NL88 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHISA7A6NL88 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SHISA7A6NL88 AC093536.1-201ENST00000569153 554 ntBASIC25.56■■□□□ 1.68
SHISA7A6NL88 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SHISA7A6NL88 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHISA7A6NL88 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SHISA7A6NL88 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SHISA7A6NL88 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
SHISA7A6NL88 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.55■■□□□ 1.68
SHISA7A6NL88 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SHISA7A6NL88 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SHISA7A6NL88 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.54■■□□□ 1.68
SHISA7A6NL88 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SHISA7A6NL88 AC103834.1-201ENST00000520383 144 ntBASIC25.54■■□□□ 1.68
SHISA7A6NL88 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHISA7A6NL88 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.53■■□□□ 1.68
SHISA7A6NL88 AL592295.1-201ENST00000400984 884 ntBASIC25.53■■□□□ 1.68
SHISA7A6NL88 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SHISA7A6NL88 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SHISA7A6NL88 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHISA7A6NL88 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.53■■□□□ 1.68
SHISA7A6NL88 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SHISA7A6NL88 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SHISA7A6NL88 PVT1_1.1-201ENST00000615125 194 ntBASIC25.52■■□□□ 1.68
SHISA7A6NL88 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.51■■□□□ 1.67
SHISA7A6NL88 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SHISA7A6NL88 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
SHISA7A6NL88 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.51■■□□□ 1.67
SHISA7A6NL88 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
SHISA7A6NL88 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
SHISA7A6NL88 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.51■■□□□ 1.67
SHISA7A6NL88 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.5■■□□□ 1.67
SHISA7A6NL88 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.5■■□□□ 1.67
SHISA7A6NL88 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
SHISA7A6NL88 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.5■■□□□ 1.67
SHISA7A6NL88 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SHISA7A6NL88 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHISA7A6NL88 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.49■■□□□ 1.67
SHISA7A6NL88 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
SHISA7A6NL88 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.48■■□□□ 1.67
SHISA7A6NL88 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHISA7A6NL88 KRT8P33-201ENST00000508125 1423 ntBASIC25.48■■□□□ 1.67
SHISA7A6NL88 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.48■■□□□ 1.67
SHISA7A6NL88 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SHISA7A6NL88 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SHISA7A6NL88 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.48■■□□□ 1.67
SHISA7A6NL88 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SHISA7A6NL88 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.47■■□□□ 1.67
SHISA7A6NL88 AC009299.2-201ENST00000482477 511 ntBASIC25.47■■□□□ 1.67
SHISA7A6NL88 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.47■■□□□ 1.67
SHISA7A6NL88 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SHISA7A6NL88 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.46■■□□□ 1.67
SHISA7A6NL88 AC074183.2-201ENST00000623112 922 ntBASIC25.46■■□□□ 1.67
SHISA7A6NL88 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.46■■□□□ 1.67
SHISA7A6NL88 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.67
SHISA7A6NL88 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SHISA7A6NL88 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SHISA7A6NL88 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.45■■□□□ 1.66
SHISA7A6NL88 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SHISA7A6NL88 BHLHE23-202ENST00000612929 1109 ntBASIC25.45■■□□□ 1.66
SHISA7A6NL88 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SHISA7A6NL88 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHISA7A6NL88 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SHISA7A6NL88 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms