Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.923e-6■□□□□ 9.7
SUB1P53999 VCL-206ENST00000623461 7995 ntTSL 1 (best)8.02□□□□□ -1.133e-6■□□□□ 9.7
SUB1P53999 EIF1-204ENST00000469308 815 ntTSL 217.04■□□□□ 0.327e-19■□□□□ 9.7
SUB1P53999 EIF1-207ENST00000591776 797 ntTSL 4 BASIC5.65□□□□□ -1.57e-19■□□□□ 9.7
SUB1P53999 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.384e-7■□□□□ 9.7
SUB1P53999 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.355e-7■□□□□ 9.7
SUB1P53999 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.615e-7■□□□□ 9.7
SUB1P53999 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.271e-6■□□□□ 9.6
SUB1P53999 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.26□□□□□ -0.131e-6■□□□□ 9.6
SUB1P53999 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.88□□□□□ -0.511e-6■□□□□ 9.6
SUB1P53999 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC10.66□□□□□ -0.71e-6■□□□□ 9.6
SUB1P53999 ARF1-209ENST00000478424 1059 ntTSL 218.31■□□□□ 0.523e-12■□□□□ 9.6
SUB1P53999 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.442e-9■□□□□ 9.6
SUB1P53999 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.232e-9■□□□□ 9.6
SUB1P53999 RPL21-204ENST00000326092 641 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.242e-9■□□□□ 9.6
SUB1P53999 RPL21-202ENST00000311549 815 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.242e-9■□□□□ 9.6
SUB1P53999 RPL21-205ENST00000461690 681 ntTSL 52.82□□□□□ -1.962e-9■□□□□ 9.6
SUB1P53999 RPL21-208ENST00000483765 453 ntTSL 32.48□□□□□ -2.012e-9■□□□□ 9.6
SUB1P53999 RPL21-209ENST00000485756 675 ntTSL 22.41□□□□□ -2.022e-9■□□□□ 9.6
SUB1P53999 RPS5-206ENST00000598807 970 ntTSL 213.18□□□□□ -0.32e-11■□□□□ 9.6
SUB1P53999 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.861e-8■□□□□ 9.6
SUB1P53999 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.41■□□□□ 0.861e-8■□□□□ 9.6
SUB1P53999 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.41■□□□□ 0.861e-8■□□□□ 9.6
SUB1P53999 GNAS-229ENST00000470512 913 ntTSL 518.76■□□□□ 0.591e-8■□□□□ 9.6
SUB1P53999 GNAS-237ENST00000480232 893 ntTSL 518.75■□□□□ 0.591e-8■□□□□ 9.6
SUB1P53999 GNAS-234ENST00000477931 1663 ntTSL 1 (best)18.21■□□□□ 0.511e-8■□□□□ 9.6
SUB1P53999 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.491e-8■□□□□ 9.6
SUB1P53999 GNAS-233ENST00000476935 828 ntTSL 317.74■□□□□ 0.431e-8■□□□□ 9.6
SUB1P53999 GNAS-248ENST00000488652 953 ntTSL 515.91■□□□□ 0.141e-8■□□□□ 9.6
SUB1P53999 GNAS-238ENST00000480975 1534 ntTSL 515.48■□□□□ 0.071e-8■□□□□ 9.6
SUB1P53999 GNAS-222ENST00000464624 3764 ntTSL 511.41□□□□□ -0.581e-8■□□□□ 9.6
SUB1P53999 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.35□□□□□ -0.591e-8■□□□□ 9.6
SUB1P53999 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC10.54□□□□□ -0.721e-8■□□□□ 9.6
SUB1P53999 GNAS-245ENST00000487862 1782 ntTSL 29.42□□□□□ -0.91e-8■□□□□ 9.6
SUB1P53999 GNAS-232ENST00000476196 1839 ntTSL 29.04□□□□□ -0.961e-8■□□□□ 9.6
SUB1P53999 GNAS-208ENST00000371075 2551 ntTSL 1 (best) BASIC8.58□□□□□ -1.041e-8■□□□□ 9.6
SUB1P53999 GNAS-247ENST00000488546 897 ntTSL 58.42□□□□□ -1.061e-8■□□□□ 9.6
SUB1P53999 GNAS-253ENST00000493958 534 ntTSL 28.3□□□□□ -1.081e-8■□□□□ 9.6
SUB1P53999 GNAS-246ENST00000487981 581 ntTSL 58.02□□□□□ -1.131e-8■□□□□ 9.6
SUB1P53999 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC7.85□□□□□ -1.151e-8■□□□□ 9.6
SUB1P53999 GNAS-239ENST00000481039 756 ntTSL 57.82□□□□□ -1.161e-8■□□□□ 9.6
SUB1P53999 GNAS-254ENST00000494081 557 ntTSL 57.18□□□□□ -1.261e-8■□□□□ 9.6
SUB1P53999 GNAS-251ENST00000492907 790 ntTSL 35.66□□□□□ -1.51e-8■□□□□ 9.6
SUB1P53999 GNAS-255ENST00000496934 2837 ntTSL 25.43□□□□□ -1.541e-8■□□□□ 9.6
SUB1P53999 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.52□□□□□ -1.851e-8■□□□□ 9.6
SUB1P53999 LAMTOR5-202ENST00000464240 1830 ntTSL 214.81□□□□□ -0.043e-7■□□□□ 9.5
SUB1P53999 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.7□□□□□ -0.383e-7■□□□□ 9.5
SUB1P53999 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.7□□□□□ -0.383e-7■□□□□ 9.5
SUB1P53999 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.383e-7■□□□□ 9.5
SUB1P53999 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.41□□□□□ -0.423e-7■□□□□ 9.5
SUB1P53999 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC10.37□□□□□ -0.753e-7■□□□□ 9.5
SUB1P53999 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.891e-15■□□□□ 9.5
SUB1P53999 PLEKHJ1-202ENST00000585423 494 ntTSL 220.06■□□□□ 0.81e-7■□□□□ 9.5
SUB1P53999 PLEKHJ1-203ENST00000586497 573 ntTSL 319.52■□□□□ 0.721e-7■□□□□ 9.5
SUB1P53999 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.611e-7■□□□□ 9.5
SUB1P53999 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.491e-7■□□□□ 9.5
SUB1P53999 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.361e-7■□□□□ 9.5
SUB1P53999 TMUB1-206ENST00000488752 584 ntTSL 217.24■□□□□ 0.351e-7■□□□□ 9.5
SUB1P53999 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.341e-7■□□□□ 9.5
SUB1P53999 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.315e-6■□□□□ 9.5
SUB1P53999 CMPK1-202ENST00000371871 1212 ntTSL 216.65■□□□□ 0.265e-6■□□□□ 9.5
SUB1P53999 BAG6-262ENST00000470875 1000 ntTSL 516.39■□□□□ 0.212e-7■□□□□ 9.5
SUB1P53999 GSTP1-205ENST00000494593 1681 ntTSL 215.93■□□□□ 0.141e-15■□□□□ 9.5
SUB1P53999 KCNH2-204ENST00000461280 2430 ntTSL 1 (best)15.54■□□□□ 0.081e-7■□□□□ 9.5
SUB1P53999 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.5■□□□□ 0.071e-7■□□□□ 9.5
SUB1P53999 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.025e-6■□□□□ 9.5
SUB1P53999 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.061e-7■□□□□ 9.5
SUB1P53999 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.6□□□□□ -0.071e-7■□□□□ 9.5
SUB1P53999 KCNH2-205ENST00000473610 2782 ntTSL 214.5□□□□□ -0.091e-7■□□□□ 9.5
SUB1P53999 KCNH2-206ENST00000532957 3374 ntTSL 214.4□□□□□ -0.11e-7■□□□□ 9.5
SUB1P53999 AP2A1-205ENST00000597774 2196 ntTSL 513.79□□□□□ -0.25e-6■□□□□ 9.5
SUB1P53999 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.21e-7■□□□□ 9.5
SUB1P53999 TALDO1-202ENST00000528070 856 ntTSL 513.55□□□□□ -0.245e-6■□□□□ 9.5
SUB1P53999 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.27□□□□□ -0.295e-9■□□□□ 9.5
SUB1P53999 KRT19-205ENST00000471565 654 ntTSL 212.92□□□□□ -0.345e-6■□□□□ 9.5
SUB1P53999 AP2A1-204ENST00000594838 611 ntTSL 312.54□□□□□ -0.45e-6■□□□□ 9.5
SUB1P53999 PLEKHM2-204ENST00000477849 1057 ntTSL 512.43□□□□□ -0.425e-6■□□□□ 9.5
SUB1P53999 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.421e-7■□□□□ 9.5
SUB1P53999 STAT3-205ENST00000462286 1982 nt12.11□□□□□ -0.471e-7■□□□□ 9.5
SUB1P53999 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.1□□□□□ -0.471e-7■□□□□ 9.5
SUB1P53999 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.1□□□□□ -0.471e-7■□□□□ 9.5
SUB1P53999 KRT19-207ENST00000593096 728 ntTSL 311.85□□□□□ -0.515e-6■□□□□ 9.5
SUB1P53999 SLC38A5-211ENST00000615300 797 ntTSL 311.64□□□□□ -0.551e-7■□□□□ 9.5
SUB1P53999 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.58□□□□□ -0.561e-7■□□□□ 9.5
SUB1P53999 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.575e-6■□□□□ 9.5
SUB1P53999 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.581e-11■□□□□ 9.5
SUB1P53999 SLC38A5-209ENST00000497336 493 ntTSL 511.21□□□□□ -0.611e-7■□□□□ 9.5
SUB1P53999 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.621e-7■□□□□ 9.5
SUB1P53999 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC10.9□□□□□ -0.665e-9■□□□□ 9.5
SUB1P53999 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC10.86□□□□□ -0.671e-15■□□□□ 9.5
SUB1P53999 KRT19-206ENST00000479031 427 ntTSL 210.82□□□□□ -0.685e-6■□□□□ 9.5
SUB1P53999 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.691e-7■□□□□ 9.5
SUB1P53999 MED15-220ENST00000461076 826 ntTSL 310.71□□□□□ -0.691e-7■□□□□ 9.5
SUB1P53999 EIF4B-210ENST00000550704 1476 ntTSL 510.66□□□□□ -0.75e-9■□□□□ 9.5
SUB1P53999 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC10.63□□□□□ -0.711e-11■□□□□ 9.5
SUB1P53999 EIF4B-205ENST00000549481 1097 ntTSL 59.91□□□□□ -0.825e-9■□□□□ 9.5
SUB1P53999 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC9.8□□□□□ -0.845e-6■□□□□ 9.5
SUB1P53999 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC9.62□□□□□ -0.871e-11■□□□□ 9.5
SUB1P53999 EIF4B-203ENST00000420463 1936 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.895e-9■□□□□ 9.5
SUB1P53999 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC9.44□□□□□ -0.95e-9■□□□□ 9.5
Retrieved 100 of 11,644 protein–RNA pairs in 143.5 ms