RNA–Protein interactions for RNA: ENST00000473610.5

KCNH2-205, Transcript of potassium voltage-gated channel subfamily H member 2, humanhuman

TSL 2

Gene KCNH2, Length 2,782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNH2-205ENST00000473610 NISCHQ9Y2I1 1504 aa35.76■■■■□ 3.32
KCNH2-205ENST00000473610 SHROOM4Q9ULL8 1493 aa31.41■■■□□ 2.62
KCNH2-205ENST00000473610 SUPT5HO00267 1087 aaKnown RBP31.02■■■□□ 2.56
KCNH2-205ENST00000473610 ZCCHC6Q5VYS8 1495 aaKnown RBP30.32■■■□□ 2.44
KCNH2-205ENST00000473610 MYO15BQ96JP2 1530 aa30.28■■■□□ 2.44
KCNH2-205ENST00000473610 CHIC1Q5VXU3 224 aa30.18■■■□□ 2.42
KCNH2-205ENST00000473610 HRCP23327 699 aa30.16■■■□□ 2.42
KCNH2-205ENST00000473610 DCAF8L2P0C7V8 631 aa30.08■■■□□ 2.41
KCNH2-205ENST00000473610 PCGF6Q9BYE7 350 aa29.99■■■□□ 2.39
KCNH2-205ENST00000473610 CCDC180Q9P1Z9 1646 aa29.95■■■□□ 2.39
KCNH2-205ENST00000473610 PPARGC1BQ86YN6 1023 aaKnown RBP29.74■■■□□ 2.35
KCNH2-205ENST00000473610 LOC105371045A0A1W2PR82 267 aa29.52■■■□□ 2.32
KCNH2-205ENST00000473610 DCAF1Q9Y4B6 1507 aa29.33■■■□□ 2.29
KCNH2-205ENST00000473610 TRIM26Q12899 539 aaPredicted RBP29.07■■■□□ 2.24
KCNH2-205ENST00000473610 FAM9AQ8IZU1 332 aaPredicted RBP28.73■■■□□ 2.19
KCNH2-205ENST00000473610 ABCC9O60706 1549 aa28.73■■■□□ 2.19
KCNH2-205ENST00000473610 EHMT2Q96KQ7 1210 aa28.69■■■□□ 2.18
KCNH2-205ENST00000473610 TRIM41Q8WV44 630 aa28.68■■■□□ 2.18
KCNH2-205ENST00000473610 RSF1Q96T23 1441 aaPredicted RBP28.59■■■□□ 2.17
KCNH2-205ENST00000473610 SCRIBQ14160 1630 aa28.57■■■□□ 2.16
KCNH2-205ENST00000473610 ZEB1P37275 1124 aaPredicted RBP28.54■■■□□ 2.16
KCNH2-205ENST00000473610 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
KCNH2-205ENST00000473610 SCAF1Q9H7N4 1312 aaKnown RBP28.25■■■□□ 2.11
KCNH2-205ENST00000473610 CECR2Q9BXF3 1484 aa28.06■■■□□ 2.08
KCNH2-205ENST00000473610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.04■■■□□ 2.08
KCNH2-205ENST00000473610 PELP1Q8IZL8 1130 aaKnown RBP28.01■■■□□ 2.07
KCNH2-205ENST00000473610 MROH2BQ7Z745 1585 aa27.96■■■□□ 2.07
KCNH2-205ENST00000473610 CCER1Q8TC90 406 aaPredicted RBP27.93■■■□□ 2.06
KCNH2-205ENST00000473610 TTBK1Q5TCY1 1321 aaPredicted RBP27.88■■■□□ 2.05
KCNH2-205ENST00000473610 WIZO95785 1651 aa27.87■■■□□ 2.05
KCNH2-205ENST00000473610 NEUROD1Q13562 356 aa27.72■■■□□ 2.03
KCNH2-205ENST00000473610 ACIN1Q9UKV3 1341 aaKnown RBP27.71■■■□□ 2.03
KCNH2-205ENST00000473610 NACADO15069 1562 aa27.64■■■□□ 2.01
KCNH2-205ENST00000473610 DIEXFQ68CQ4 756 aaKnown RBP27.62■■■□□ 2.01
KCNH2-205ENST00000473610 BAZ1AQ9NRL2 1556 aaPredicted RBP27.56■■■□□ 2
KCNH2-205ENST00000473610 ABCC8Q09428 1581 aa27.54■■■□□ 2
KCNH2-205ENST00000473610 GTF3C3Q9Y5Q9 886 aa27.52■■■□□ 2
KCNH2-205ENST00000473610 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
KCNH2-205ENST00000473610 CCDC88BA6NC98 1476 aa27.48■■□□□ 1.99
KCNH2-205ENST00000473610 CENPBP07199 599 aaPredicted RBP27.44■■□□□ 1.98
KCNH2-205ENST00000473610 CEP162Q5TB80 1403 aa27.43■■□□□ 1.98
KCNH2-205ENST00000473610 SOGA1O94964 1423 aa27.37■■□□□ 1.97
KCNH2-205ENST00000473610 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.974e-6■■■□□ 17.8
KCNH2-205ENST00000473610 UBTFP17480 764 aaKnown RBP27.32■■□□□ 1.96
KCNH2-205ENST00000473610 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.95
KCNH2-205ENST00000473610 YTHDC1Q96MU7 727 aaKnown RBP27.25■■□□□ 1.95
KCNH2-205ENST00000473610 RUSC2Q8N2Y8 1516 aa27.23■■□□□ 1.95
KCNH2-205ENST00000473610 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
KCNH2-205ENST00000473610 ZNF316A6NFI3 1004 aaPredicted RBP27.2■■□□□ 1.94
KCNH2-205ENST00000473610 CSRNP3Q8WYN3 585 aa27.19■■□□□ 1.94
KCNH2-205ENST00000473610 SMARCA2P51531 1590 aa27.19■■□□□ 1.94
KCNH2-205ENST00000473610 SMARCA4P51532 1647 aa27.14■■□□□ 1.93
KCNH2-205ENST00000473610 HNRNPUL2Q1KMD3 747 aaKnown RBP27.12■■□□□ 1.93
KCNH2-205ENST00000473610 MIER1Q8N108 512 aa27■■□□□ 1.91
KCNH2-205ENST00000473610 EEA1Q15075 1411 aa27■■□□□ 1.91
KCNH2-205ENST00000473610 GOLGA3Q08378 1498 aa27■■□□□ 1.91
KCNH2-205ENST00000473610 UNC13AQ9UPW8 1703 aa26.98■■□□□ 1.91
KCNH2-205ENST00000473610 RANGAP1P46060 587 aaPredicted RBP26.92■■□□□ 1.9
KCNH2-205ENST00000473610 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
KCNH2-205ENST00000473610 CLIP1P30622 1438 aa26.8■■□□□ 1.88
KCNH2-205ENST00000473610 CEP164Q9UPV0 1460 aa26.76■■□□□ 1.88
KCNH2-205ENST00000473610 APLP2Q06481 763 aa26.76■■□□□ 1.87
KCNH2-205ENST00000473610 SYNJ1O43426 1573 aa26.73■■□□□ 1.87
KCNH2-205ENST00000473610 VPS8Q8N3P4 1428 aa26.68■■□□□ 1.86
KCNH2-205ENST00000473610 KIF21BO75037 1637 aa26.66■■□□□ 1.86
KCNH2-205ENST00000473610 MYT1Q01538 1121 aa26.65■■□□□ 1.86
KCNH2-205ENST00000473610 RAPGEF2Q9Y4G8 1499 aa26.63■■□□□ 1.85
KCNH2-205ENST00000473610 BICRAQ9NZM4 1560 aa26.62■■□□□ 1.85
KCNH2-205ENST00000473610 BAZ1BQ9UIG0 1483 aaKnown RBP26.47■■□□□ 1.83
KCNH2-205ENST00000473610 DHX57Q6P158 1386 aaKnown RBP26.41■■□□□ 1.82
KCNH2-205ENST00000473610 PEG3Q9GZU2 1588 aa26.4■■□□□ 1.82
KCNH2-205ENST00000473610 KANK4Q5T7N3 995 aaPredicted RBP26.37■■□□□ 1.81
KCNH2-205ENST00000473610 ATAD2BQ9ULI0 1458 aa26.34■■□□□ 1.81
KCNH2-205ENST00000473610 SUPT16HQ9Y5B9 1047 aaKnown RBP26.3■■□□□ 1.8
KCNH2-205ENST00000473610 ITGAEP38570 1179 aa26.28■■□□□ 1.8
KCNH2-205ENST00000473610 CLSPNQ9HAW4 1339 aa26.27■■□□□ 1.8
KCNH2-205ENST00000473610 ARAP1Q96P48 1450 aa26.26■■□□□ 1.8
KCNH2-205ENST00000473610 TOP2BQ02880 1626 aa26.23■■□□□ 1.79
KCNH2-205ENST00000473610 PRXQ9BXM0 1461 aa26.14■■□□□ 1.77
KCNH2-205ENST00000473610 KCNH8Q96L42 1107 aa26.13■■□□□ 1.77
KCNH2-205ENST00000473610 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
KCNH2-205ENST00000473610 RRBP1Q9P2E9 1410 aaKnown RBP26.08■■□□□ 1.77
KCNH2-205ENST00000473610 BIVM-ERCC5R4GMW8 1640 aa26.07■■□□□ 1.76
KCNH2-205ENST00000473610 CCNB3Q8WWL7 1395 aa26.06■■□□□ 1.76
KCNH2-205ENST00000473610 TSHZ2Q9NRE2 1034 aa26.01■■□□□ 1.76
KCNH2-205ENST00000473610 BCANQ96GW7 911 aa25.99■■□□□ 1.75
KCNH2-205ENST00000473610 CUX1P39880 1505 aa25.96■■□□□ 1.75
KCNH2-205ENST00000473610 ARHGAP35Q9NRY4 1499 aa25.95■■□□□ 1.74
KCNH2-205ENST00000473610 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.74
KCNH2-205ENST00000473610 KIF27Q86VH2 1401 aa25.95■■□□□ 1.74
KCNH2-205ENST00000473610 CUX2O14529 1486 aa25.93■■□□□ 1.74
KCNH2-205ENST00000473610 DDX10Q13206 875 aaKnown RBP25.88■■□□□ 1.73
KCNH2-205ENST00000473610 MAPKBP1O60336 1514 aa25.86■■□□□ 1.73
KCNH2-205ENST00000473610 SIN3AQ96ST3 1273 aa25.86■■□□□ 1.73
KCNH2-205ENST00000473610 HIRIP3Q9BW71 556 aaPredicted RBP25.82■■□□□ 1.72
KCNH2-205ENST00000473610 FAM50AQ14320 339 aaKnown RBP25.81■■□□□ 1.72
KCNH2-205ENST00000473610 FKBP8Q14318 412 aa25.81■■□□□ 1.72
KCNH2-205ENST00000473610 WDR97A6NE52 1622 aa25.76■■□□□ 1.72
KCNH2-205ENST00000473610 ATP1B4Q9UN42 357 aaPredicted RBP25.76■■□□□ 1.71
KCNH2-205ENST00000473610 SETD5Q9C0A6 1442 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms