RNA–Protein interactions for RNA: ENST00000493958.5

GNAS-253, Transcript of GNAS complex locus, humanhuman

TSL 2

Gene GNAS, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNAS-253ENST00000493958 NISCHQ9Y2I1 1504 aa26.88■■□□□ 1.89
GNAS-253ENST00000493958 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
GNAS-253ENST00000493958 ABCC9O60706 1549 aa23.47■■□□□ 1.35
GNAS-253ENST00000493958 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
GNAS-253ENST00000493958 RB1CC1Q8TDY2 1594 aa22.49■■□□□ 1.19
GNAS-253ENST00000493958 NACADO15069 1562 aa22.42■■□□□ 1.18
GNAS-253ENST00000493958 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
GNAS-253ENST00000493958 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
GNAS-253ENST00000493958 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
GNAS-253ENST00000493958 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
GNAS-253ENST00000493958 SCRIBQ14160 1630 aa21.92■■□□□ 1.1
GNAS-253ENST00000493958 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.1
GNAS-253ENST00000493958 BICRAQ9NZM4 1560 aa21.9■■□□□ 1.1
GNAS-253ENST00000493958 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
GNAS-253ENST00000493958 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.03
GNAS-253ENST00000493958 EIF4G1Q04637 1599 aaKnown RBP21.27■■□□□ 1
GNAS-253ENST00000493958 CC2D2AQ9P2K1 1620 aa21.22■□□□□ 0.99
GNAS-253ENST00000493958 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
GNAS-253ENST00000493958 SMARCA4P51532 1647 aa20.9■□□□□ 0.94
GNAS-253ENST00000493958 BAZ1AQ9NRL2 1556 aaPredicted RBP20.81■□□□□ 0.92
GNAS-253ENST00000493958 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
GNAS-253ENST00000493958 ATAD2BQ9ULI0 1458 aa20.75■□□□□ 0.91
GNAS-253ENST00000493958 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
GNAS-253ENST00000493958 NCAPD3P42695 1498 aa20.68■□□□□ 0.9
GNAS-253ENST00000493958 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
GNAS-253ENST00000493958 HMGXB3Q12766 1538 aa20.61■□□□□ 0.89
GNAS-253ENST00000493958 WIZO95785 1651 aa20.61■□□□□ 0.89
GNAS-253ENST00000493958 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
GNAS-253ENST00000493958 RSF1Q96T23 1441 aaPredicted RBP20.48■□□□□ 0.87
GNAS-253ENST00000493958 NESP48681 1621 aa20.34■□□□□ 0.85
GNAS-253ENST00000493958 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
GNAS-253ENST00000493958 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
GNAS-253ENST00000493958 ERCC6Q03468 1493 aa20.17■□□□□ 0.82
GNAS-253ENST00000493958 KIF21AQ7Z4S6 1674 aa20.13■□□□□ 0.81
GNAS-253ENST00000493958 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.81
GNAS-253ENST00000493958 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
GNAS-253ENST00000493958 SUPT5HO00267 1087 aaKnown RBP20.02■□□□□ 0.8
GNAS-253ENST00000493958 THOC2Q8NI27 1593 aaKnown RBP20.01■□□□□ 0.79
GNAS-253ENST00000493958 PDS5BQ9NTI5 1447 aa19.99■□□□□ 0.79
GNAS-253ENST00000493958 CFTRP13569 1480 aa19.98■□□□□ 0.79
GNAS-253ENST00000493958 PRDM2Q13029 1718 aa19.95■□□□□ 0.78
GNAS-253ENST00000493958 FANCD2Q9BXW9 1451 aa19.91■□□□□ 0.78
GNAS-253ENST00000493958 CUX2O14529 1486 aa19.9■□□□□ 0.78
GNAS-253ENST00000493958 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
GNAS-253ENST00000493958 MRC2Q9UBG0 1479 aa19.85■□□□□ 0.77
GNAS-253ENST00000493958 WDR62O43379 1518 aa19.79■□□□□ 0.76
GNAS-253ENST00000493958 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
GNAS-253ENST00000493958 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
GNAS-253ENST00000493958 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
GNAS-253ENST00000493958 CUX1P39880 1505 aa19.5■□□□□ 0.71
GNAS-253ENST00000493958 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
GNAS-253ENST00000493958 ZNF608Q9ULD9 1512 aaPredicted RBP19.44■□□□□ 0.7
GNAS-253ENST00000493958 POLA1P09884 1462 aaPredicted RBP19.43■□□□□ 0.7
GNAS-253ENST00000493958 IFT140Q96RY7 1462 aa19.42■□□□□ 0.7
GNAS-253ENST00000493958 TARBP1Q13395 1621 aaKnown RBP19.42■□□□□ 0.7
GNAS-253ENST00000493958 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
GNAS-253ENST00000493958 RAD54L2Q9Y4B4 1467 aa19.41■□□□□ 0.7
GNAS-253ENST00000493958 EIF4G3O43432 1585 aaKnown RBP19.37■□□□□ 0.69
GNAS-253ENST00000493958 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
GNAS-253ENST00000493958 SOGA1O94964 1423 aa19.33■□□□□ 0.68
GNAS-253ENST00000493958 BIVM-ERCC5R4GMW8 1640 aa19.32■□□□□ 0.68
GNAS-253ENST00000493958 AQRO60306 1485 aaKnown RBP eCLIP19.3■□□□□ 0.681e-9■■■□□ 17.7
GNAS-253ENST00000493958 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
GNAS-253ENST00000493958 DNAJC5Q9H3Z4 198 aa19.3■□□□□ 0.68
GNAS-253ENST00000493958 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
GNAS-253ENST00000493958 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
GNAS-253ENST00000493958 TDRD9Q8NDG6 1382 aaKnown RBP19.26■□□□□ 0.67
GNAS-253ENST00000493958 PBRM1Q86U86 1689 aa19.18■□□□□ 0.66
GNAS-253ENST00000493958 CHD1O14646 1710 aa19.18■□□□□ 0.66
GNAS-253ENST00000493958 ABCA10Q8WWZ4 1543 aa19.16■□□□□ 0.66
GNAS-253ENST00000493958 ABCA5Q8WWZ7 1642 aa19.15■□□□□ 0.66
GNAS-253ENST00000493958 SNAPC4Q5SXM2 1469 aa19.13■□□□□ 0.65
GNAS-253ENST00000493958 GAPVD1Q14C86 1478 aa19.11■□□□□ 0.65
GNAS-253ENST00000493958 GRIN2BQ13224 1484 aa19.09■□□□□ 0.65
GNAS-253ENST00000493958 FBLN2P98095 1184 aa19.06■□□□□ 0.64
GNAS-253ENST00000493958 OSCARQ8IYS5 282 aa19.05■□□□□ 0.64
GNAS-253ENST00000493958 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
GNAS-253ENST00000493958 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
GNAS-253ENST00000493958 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
GNAS-253ENST00000493958 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
GNAS-253ENST00000493958 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
GNAS-253ENST00000493958 RIMBP3CA6NJZ7 1639 aa18.9■□□□□ 0.62
GNAS-253ENST00000493958 RIMBP3BA6NNM3 1639 aa18.9■□□□□ 0.62
GNAS-253ENST00000493958 RIMBP3Q9UFD9 1639 aa18.9■□□□□ 0.62
GNAS-253ENST00000493958 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
GNAS-253ENST00000493958 GRIN2AQ12879 1464 aa18.87■□□□□ 0.61
GNAS-253ENST00000493958 KIF27Q86VH2 1401 aa18.86■□□□□ 0.61
GNAS-253ENST00000493958 FHAD1B1AJZ9 1412 aa18.85■□□□□ 0.61
GNAS-253ENST00000493958 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
GNAS-253ENST00000493958 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
GNAS-253ENST00000493958 RUSC2Q8N2Y8 1516 aa18.84■□□□□ 0.61
GNAS-253ENST00000493958 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
GNAS-253ENST00000493958 IGF1RP08069 1367 aa18.81■□□□□ 0.6
GNAS-253ENST00000493958 CUL7Q14999 1698 aa18.79■□□□□ 0.6
GNAS-253ENST00000493958 NUP160Q12769 1436 aa18.76■□□□□ 0.59
GNAS-253ENST00000493958 ERCC6L2Q5T890 1561 aa18.72■□□□□ 0.59
GNAS-253ENST00000493958 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
GNAS-253ENST00000493958 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
GNAS-253ENST00000493958 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
GNAS-253ENST00000493958 CYB5RLQ6IPT4 315 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms