RNA–Protein interactions for RNA: ENST00000550704.5

EIF4B-210, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 5

Gene EIF4B, Length 1,476 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-210ENST00000550704 NISCHQ9Y2I1 1504 aa34.97■■■■□ 3.19
EIF4B-210ENST00000550704 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.58
EIF4B-210ENST00000550704 ABCC9O60706 1549 aa30.74■■■□□ 2.51
EIF4B-210ENST00000550704 RB1CC1Q8TDY2 1594 aa29.41■■■□□ 2.3
EIF4B-210ENST00000550704 NACADO15069 1562 aa29.3■■■□□ 2.28
EIF4B-210ENST00000550704 DCAF8L2P0C7V8 631 aa29.27■■■□□ 2.28
EIF4B-210ENST00000550704 ZCCHC6Q5VYS8 1495 aaKnown RBP29.15■■■□□ 2.26
EIF4B-210ENST00000550704 MYO15BQ96JP2 1530 aa28.99■■■□□ 2.23
EIF4B-210ENST00000550704 UNC13AQ9UPW8 1703 aa28.87■■■□□ 2.21
EIF4B-210ENST00000550704 DCAF1Q9Y4B6 1507 aa28.86■■■□□ 2.21
EIF4B-210ENST00000550704 PABPN1Q86U42 306 aaKnown RBP eCLIP28.65■■■□□ 2.18
EIF4B-210ENST00000550704 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
EIF4B-210ENST00000550704 SCRIBQ14160 1630 aa28.57■■■□□ 2.16
EIF4B-210ENST00000550704 DNAJC5BQ9UF47 199 aa28.27■■■□□ 2.12
EIF4B-210ENST00000550704 SHROOM4Q9ULL8 1493 aa28.14■■■□□ 2.1
EIF4B-210ENST00000550704 EIF4G1Q04637 1599 aaKnown RBP27.84■■■□□ 2.05
EIF4B-210ENST00000550704 CC2D2AQ9P2K1 1620 aa27.77■■■□□ 2.04
EIF4B-210ENST00000550704 CECR2Q9BXF3 1484 aa27.58■■■□□ 2.01
EIF4B-210ENST00000550704 SMARCA4P51532 1647 aa27.24■■□□□ 1.95
EIF4B-210ENST00000550704 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
EIF4B-210ENST00000550704 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
EIF4B-210ENST00000550704 SMARCA2P51531 1590 aa27.01■■□□□ 1.91
EIF4B-210ENST00000550704 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.91
EIF4B-210ENST00000550704 NCAPD3P42695 1498 aa27■■□□□ 1.91
EIF4B-210ENST00000550704 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
EIF4B-210ENST00000550704 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
EIF4B-210ENST00000550704 BAZ1BQ9UIG0 1483 aaKnown RBP26.86■■□□□ 1.89
EIF4B-210ENST00000550704 WIZO95785 1651 aa26.75■■□□□ 1.87
EIF4B-210ENST00000550704 RSF1Q96T23 1441 aaPredicted RBP26.58■■□□□ 1.85
EIF4B-210ENST00000550704 NESP48681 1621 aa26.57■■□□□ 1.84
EIF4B-210ENST00000550704 ERCC6Q03468 1493 aa26.47■■□□□ 1.83
EIF4B-210ENST00000550704 TOP2AP11388 1531 aaKnown RBP26.41■■□□□ 1.82
EIF4B-210ENST00000550704 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
EIF4B-210ENST00000550704 KIF21AQ7Z4S6 1674 aa26.29■■□□□ 1.8
EIF4B-210ENST00000550704 CADPSQ9ULU8 1353 aa26.22■■□□□ 1.79
EIF4B-210ENST00000550704 THOC2Q8NI27 1593 aaKnown RBP26.21■■□□□ 1.79
EIF4B-210ENST00000550704 CUX2O14529 1486 aa26.17■■□□□ 1.78
EIF4B-210ENST00000550704 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
EIF4B-210ENST00000550704 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
EIF4B-210ENST00000550704 CFTRP13569 1480 aa26.05■■□□□ 1.76
EIF4B-210ENST00000550704 FANCD2Q9BXW9 1451 aa26■■□□□ 1.75
EIF4B-210ENST00000550704 CEP164Q9UPV0 1460 aa25.99■■□□□ 1.75
EIF4B-210ENST00000550704 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
EIF4B-210ENST00000550704 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
EIF4B-210ENST00000550704 WDR62O43379 1518 aa25.91■■□□□ 1.74
EIF4B-210ENST00000550704 SUPT5HO00267 1087 aaKnown RBP25.82■■□□□ 1.72
EIF4B-210ENST00000550704 URB2Q14146 1524 aaKnown RBP25.79■■□□□ 1.72
EIF4B-210ENST00000550704 TOPBP1Q92547 1522 aa25.58■■□□□ 1.68
EIF4B-210ENST00000550704 DNMBPQ6XZF7 1577 aa25.54■■□□□ 1.68
EIF4B-210ENST00000550704 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
EIF4B-210ENST00000550704 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
EIF4B-210ENST00000550704 IFT140Q96RY7 1462 aa25.4■■□□□ 1.66
EIF4B-210ENST00000550704 ZNF608Q9ULD9 1512 aaPredicted RBP25.4■■□□□ 1.66
EIF4B-210ENST00000550704 CUX1P39880 1505 aa25.36■■□□□ 1.65
EIF4B-210ENST00000550704 POLA1P09884 1462 aaPredicted RBP25.35■■□□□ 1.65
EIF4B-210ENST00000550704 EIF4G3O43432 1585 aaKnown RBP25.33■■□□□ 1.65
EIF4B-210ENST00000550704 TARBP1Q13395 1621 aaKnown RBP25.33■■□□□ 1.64
EIF4B-210ENST00000550704 FGD5Q6ZNL6 1462 aa25.29■■□□□ 1.64
EIF4B-210ENST00000550704 RAD54L2Q9Y4B4 1467 aa25.27■■□□□ 1.64
EIF4B-210ENST00000550704 AQRO60306 1485 aaKnown RBP eCLIP25.18■■□□□ 1.626e-7■■■■■ 30.4
EIF4B-210ENST00000550704 SOGA1O94964 1423 aa25.17■■□□□ 1.62
EIF4B-210ENST00000550704 WDR97A6NE52 1622 aa25.14■■□□□ 1.62
EIF4B-210ENST00000550704 SYNJ1O43426 1573 aa25.13■■□□□ 1.61
EIF4B-210ENST00000550704 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
EIF4B-210ENST00000550704 BIVM-ERCC5R4GMW8 1640 aa25.09■■□□□ 1.61
EIF4B-210ENST00000550704 WRNQ14191 1432 aaPredicted RBP eCLIP25.07■■□□□ 1.6
EIF4B-210ENST00000550704 TOP2BQ02880 1626 aa25.07■■□□□ 1.6
EIF4B-210ENST00000550704 CHD1O14646 1710 aa25.05■■□□□ 1.6
EIF4B-210ENST00000550704 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
EIF4B-210ENST00000550704 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
EIF4B-210ENST00000550704 OSCARQ8IYS5 282 aa24.97■■□□□ 1.59
EIF4B-210ENST00000550704 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
EIF4B-210ENST00000550704 ABCA10Q8WWZ4 1543 aa24.97■■□□□ 1.59
EIF4B-210ENST00000550704 GRIN2BQ13224 1484 aa24.93■■□□□ 1.58
EIF4B-210ENST00000550704 GAPVD1Q14C86 1478 aa24.92■■□□□ 1.58
EIF4B-210ENST00000550704 FBLN2P98095 1184 aa24.89■■□□□ 1.57
EIF4B-210ENST00000550704 MAGI1Q96QZ7 1491 aaPredicted RBP24.87■■□□□ 1.57
EIF4B-210ENST00000550704 SYNJ2O15056 1496 aa24.79■■□□□ 1.56
EIF4B-210ENST00000550704 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
EIF4B-210ENST00000550704 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
EIF4B-210ENST00000550704 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
EIF4B-210ENST00000550704 ADAMTS12P58397 1594 aa24.77■■□□□ 1.56
EIF4B-210ENST00000550704 ARHGEF11O15085 1522 aa24.74■■□□□ 1.55
EIF4B-210ENST00000550704 CHMP7Q8WUX9 453 aaPredicted RBP24.73■■□□□ 1.55
EIF4B-210ENST00000550704 TRIM41Q8WV44 630 aa24.73■■□□□ 1.55
EIF4B-210ENST00000550704 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
EIF4B-210ENST00000550704 ERICH3Q5RHP9 1530 aa24.67■■□□□ 1.54
EIF4B-210ENST00000550704 GRIN2AQ12879 1464 aa24.64■■□□□ 1.54
EIF4B-210ENST00000550704 FHAD1B1AJZ9 1412 aa24.59■■□□□ 1.53
EIF4B-210ENST00000550704 CEP170Q5SW79 1584 aa24.58■■□□□ 1.53
EIF4B-210ENST00000550704 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
EIF4B-210ENST00000550704 KIF27Q86VH2 1401 aa24.53■■□□□ 1.52
EIF4B-210ENST00000550704 NUP160Q12769 1436 aa24.5■■□□□ 1.51
EIF4B-210ENST00000550704 CUL7Q14999 1698 aa24.46■■□□□ 1.51
EIF4B-210ENST00000550704 ERCC6L2Q5T890 1561 aa24.43■■□□□ 1.5
EIF4B-210ENST00000550704 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
EIF4B-210ENST00000550704 IGF1RP08069 1367 aa24.41■■□□□ 1.5
EIF4B-210ENST00000550704 RUSC2Q8N2Y8 1516 aa24.41■■□□□ 1.5
EIF4B-210ENST00000550704 SHROOM2Q13796 1616 aa24.38■■□□□ 1.49
EIF4B-210ENST00000550704 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms