RNA–Protein interactions for RNA: ENST00000461280.1

KCNH2-204, Transcript of potassium voltage-gated channel subfamily H member 2, humanhuman

TSL 1 (best)

Gene KCNH2, Length 2,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNH2-204ENST00000461280 NISCHQ9Y2I1 1504 aa40.06■■■■■ 4
KCNH2-204ENST00000461280 SHROOM4Q9ULL8 1493 aa34.3■■■■□ 3.08
KCNH2-204ENST00000461280 CCDC180Q9P1Z9 1646 aa33.96■■■■□ 3.03
KCNH2-204ENST00000461280 ZCCHC6Q5VYS8 1495 aaKnown RBP33.91■■■■□ 3.02
KCNH2-204ENST00000461280 SUPT5HO00267 1087 aaKnown RBP33.64■■■□□ 2.98
KCNH2-204ENST00000461280 DCAF8L2P0C7V8 631 aa33.24■■■□□ 2.91
KCNH2-204ENST00000461280 DCAF1Q9Y4B6 1507 aa32.81■■■□□ 2.84
KCNH2-204ENST00000461280 CHIC1Q5VXU3 224 aa32.73■■■□□ 2.83
KCNH2-204ENST00000461280 MYO15BQ96JP2 1530 aa32.68■■■□□ 2.82
KCNH2-204ENST00000461280 ABCC9O60706 1549 aa32.01■■■□□ 2.71
KCNH2-204ENST00000461280 SCRIBQ14160 1630 aa31.95■■■□□ 2.71
KCNH2-204ENST00000461280 HRCP23327 699 aa31.81■■■□□ 2.68
KCNH2-204ENST00000461280 LOC105371045A0A1W2PR82 267 aa31.81■■■□□ 2.68
KCNH2-204ENST00000461280 PCGF6Q9BYE7 350 aa31.79■■■□□ 2.68
KCNH2-204ENST00000461280 RSF1Q96T23 1441 aaPredicted RBP31.76■■■□□ 2.67
KCNH2-204ENST00000461280 RB1CC1Q8TDY2 1594 aa31.46■■■□□ 2.63
KCNH2-204ENST00000461280 NACADO15069 1562 aa31.39■■■□□ 2.62
KCNH2-204ENST00000461280 CECR2Q9BXF3 1484 aa31.31■■■□□ 2.6
KCNH2-204ENST00000461280 TRIM41Q8WV44 630 aa31.28■■■□□ 2.6
KCNH2-204ENST00000461280 PPARGC1BQ86YN6 1023 aaKnown RBP31.24■■■□□ 2.59
KCNH2-204ENST00000461280 MROH2BQ7Z745 1585 aa31.19■■■□□ 2.58
KCNH2-204ENST00000461280 TRIM26Q12899 539 aaPredicted RBP31.12■■■□□ 2.57
KCNH2-204ENST00000461280 FAM9AQ8IZU1 332 aaPredicted RBP31.1■■■□□ 2.57
KCNH2-204ENST00000461280 WIZO95785 1651 aa31.03■■■□□ 2.56
KCNH2-204ENST00000461280 EHMT2Q96KQ7 1210 aa30.88■■■□□ 2.53
KCNH2-204ENST00000461280 BAZ1AQ9NRL2 1556 aaPredicted RBP30.79■■■□□ 2.52
KCNH2-204ENST00000461280 EIF4G1Q04637 1599 aaKnown RBP30.64■■■□□ 2.49
KCNH2-204ENST00000461280 SMARCA4P51532 1647 aa30.49■■■□□ 2.47
KCNH2-204ENST00000461280 TOP2AP11388 1531 aaKnown RBP30.49■■■□□ 2.47
KCNH2-204ENST00000461280 UNC13AQ9UPW8 1703 aa30.48■■■□□ 2.47
KCNH2-204ENST00000461280 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
KCNH2-204ENST00000461280 ZEB1P37275 1124 aaPredicted RBP30.39■■■□□ 2.46
KCNH2-204ENST00000461280 ABCC8Q09428 1581 aa30.39■■■□□ 2.45
KCNH2-204ENST00000461280 SMARCA2P51531 1590 aa30.36■■■□□ 2.45
KCNH2-204ENST00000461280 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
KCNH2-204ENST00000461280 SOGA1O94964 1423 aa30.11■■■□□ 2.41
KCNH2-204ENST00000461280 BICRAQ9NZM4 1560 aa30.11■■■□□ 2.41
KCNH2-204ENST00000461280 RUSC2Q8N2Y8 1516 aa29.98■■■□□ 2.39
KCNH2-204ENST00000461280 CEP162Q5TB80 1403 aa29.97■■■□□ 2.39
KCNH2-204ENST00000461280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.94■■■□□ 2.38
KCNH2-204ENST00000461280 WRNQ14191 1432 aaPredicted RBP eCLIP29.92■■■□□ 2.384e-6■■■□□ 17.8
KCNH2-204ENST00000461280 TTBK1Q5TCY1 1321 aaPredicted RBP29.9■■■□□ 2.38
KCNH2-204ENST00000461280 CSRNP3Q8WYN3 585 aa29.9■■■□□ 2.38
KCNH2-204ENST00000461280 TNIKQ9UKE5 1360 aa29.89■■■□□ 2.38
KCNH2-204ENST00000461280 PEG3Q9GZU2 1588 aa29.87■■■□□ 2.37
KCNH2-204ENST00000461280 EEA1Q15075 1411 aa29.85■■■□□ 2.37
KCNH2-204ENST00000461280 CCER1Q8TC90 406 aaPredicted RBP29.81■■■□□ 2.36
KCNH2-204ENST00000461280 UBTFP17480 764 aaKnown RBP29.8■■■□□ 2.36
KCNH2-204ENST00000461280 ATAD2BQ9ULI0 1458 aa29.71■■■□□ 2.35
KCNH2-204ENST00000461280 GOLGA3Q08378 1498 aa29.7■■■□□ 2.35
KCNH2-204ENST00000461280 SYNJ1O43426 1573 aa29.7■■■□□ 2.35
KCNH2-204ENST00000461280 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
KCNH2-204ENST00000461280 CEP164Q9UPV0 1460 aa29.52■■■□□ 2.32
KCNH2-204ENST00000461280 KIF21BO75037 1637 aa29.48■■■□□ 2.31
KCNH2-204ENST00000461280 CLIP1P30622 1438 aa29.39■■■□□ 2.3
KCNH2-204ENST00000461280 SCAF1Q9H7N4 1312 aaKnown RBP29.39■■■□□ 2.3
KCNH2-204ENST00000461280 RAPGEF2Q9Y4G8 1499 aa29.36■■■□□ 2.29
KCNH2-204ENST00000461280 TOP2BQ02880 1626 aa29.28■■■□□ 2.28
KCNH2-204ENST00000461280 VPS8Q8N3P4 1428 aa29.26■■■□□ 2.27
KCNH2-204ENST00000461280 RANGAP1P46060 587 aaPredicted RBP29.25■■■□□ 2.27
KCNH2-204ENST00000461280 DIEXFQ68CQ4 756 aaKnown RBP29.25■■■□□ 2.27
KCNH2-204ENST00000461280 HNRNPUL2Q1KMD3 747 aaKnown RBP29.21■■■□□ 2.27
KCNH2-204ENST00000461280 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
KCNH2-204ENST00000461280 APLP2Q06481 763 aa29.09■■■□□ 2.25
KCNH2-204ENST00000461280 NCAPD3P42695 1498 aa29.08■■■□□ 2.25
KCNH2-204ENST00000461280 HMGXB3Q12766 1538 aa29.07■■■□□ 2.24
KCNH2-204ENST00000461280 ACIN1Q9UKV3 1341 aaKnown RBP29.06■■■□□ 2.24
KCNH2-204ENST00000461280 NEUROD1Q13562 356 aa29.05■■■□□ 2.24
KCNH2-204ENST00000461280 PRXQ9BXM0 1461 aa29.03■■■□□ 2.24
KCNH2-204ENST00000461280 CUX1P39880 1505 aa29.03■■■□□ 2.24
KCNH2-204ENST00000461280 ZNF316A6NFI3 1004 aaPredicted RBP29.02■■■□□ 2.24
KCNH2-204ENST00000461280 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
KCNH2-204ENST00000461280 ARAP1Q96P48 1450 aa28.94■■■□□ 2.22
KCNH2-204ENST00000461280 CFTRP13569 1480 aa28.89■■■□□ 2.22
KCNH2-204ENST00000461280 KIF27Q86VH2 1401 aa28.86■■■□□ 2.21
KCNH2-204ENST00000461280 KANK4Q5T7N3 995 aaPredicted RBP28.82■■■□□ 2.2
KCNH2-204ENST00000461280 CENPBP07199 599 aaPredicted RBP28.81■■■□□ 2.2
KCNH2-204ENST00000461280 GTF3C3Q9Y5Q9 886 aa28.74■■■□□ 2.19
KCNH2-204ENST00000461280 ARHGAP35Q9NRY4 1499 aa28.67■■■□□ 2.18
KCNH2-204ENST00000461280 MIER1Q8N108 512 aa28.66■■■□□ 2.18
KCNH2-204ENST00000461280 PELP1Q8IZL8 1130 aaKnown RBP28.64■■■□□ 2.18
KCNH2-204ENST00000461280 DHX57Q6P158 1386 aaKnown RBP28.64■■■□□ 2.17
KCNH2-204ENST00000461280 YTHDC1Q96MU7 727 aaKnown RBP28.62■■■□□ 2.17
KCNH2-204ENST00000461280 CUX2O14529 1486 aa28.61■■■□□ 2.17
KCNH2-204ENST00000461280 PRDM2Q13029 1718 aa28.61■■■□□ 2.17
KCNH2-204ENST00000461280 RRBP1Q9P2E9 1410 aaKnown RBP28.59■■■□□ 2.17
KCNH2-204ENST00000461280 IGF1RP08069 1367 aa28.58■■■□□ 2.17
KCNH2-204ENST00000461280 CADPSQ9ULU8 1353 aa28.55■■■□□ 2.16
KCNH2-204ENST00000461280 CLSPNQ9HAW4 1339 aa28.52■■■□□ 2.16
KCNH2-204ENST00000461280 FGD5Q6ZNL6 1462 aa28.49■■■□□ 2.15
KCNH2-204ENST00000461280 CC2D2AQ9P2K1 1620 aa28.49■■■□□ 2.15
KCNH2-204ENST00000461280 CCNB3Q8WWL7 1395 aa28.48■■■□□ 2.15
KCNH2-204ENST00000461280 CARMIL1Q5VZK9 1371 aa28.45■■■□□ 2.14
KCNH2-204ENST00000461280 ITGAEP38570 1179 aa28.42■■■□□ 2.14
KCNH2-204ENST00000461280 TIAM1Q13009 1591 aa28.34■■■□□ 2.13
KCNH2-204ENST00000461280 FANCD2Q9BXW9 1451 aa28.3■■■□□ 2.12
KCNH2-204ENST00000461280 MAP3K1Q13233 1512 aa28.27■■■□□ 2.12
KCNH2-204ENST00000461280 P3H3Q8IVL6 736 aa28.25■■■□□ 2.11
KCNH2-204ENST00000461280 RAB3GAP2Q9H2M9 1393 aa28.25■■■□□ 2.11
KCNH2-204ENST00000461280 LRRC9Q6ZRR7 1453 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms