Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 KRT8P32-201ENST00000512863 1461 ntBASIC18.11■□□□□ 0.49
KRT78Q8N1N4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 HEIH-201ENST00000623091 1652 ntBASIC18.11■□□□□ 0.49
KRT78Q8N1N4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT78Q8N1N4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
KRT78Q8N1N4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 AL031598.1-201ENST00000561511 1773 ntBASIC18.09■□□□□ 0.49
KRT78Q8N1N4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 AC068587.9-201ENST00000641814 219 ntBASIC18.09■□□□□ 0.49
KRT78Q8N1N4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT78Q8N1N4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KRT78Q8N1N4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms