RNA–Protein interactions for RNA: ENST00000533419.1

CDC42EP2-202, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP2, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-202ENST00000533419 NISCHQ9Y2I1 1504 aa47.95■■■■■ 5.27
CDC42EP2-202ENST00000533419 CCDC180Q9P1Z9 1646 aa42.94■■■■■ 4.46
CDC42EP2-202ENST00000533419 ABCC9O60706 1549 aa42.51■■■■■ 4.39
CDC42EP2-202ENST00000533419 RB1CC1Q8TDY2 1594 aa40.66■■■■■ 4.1
CDC42EP2-202ENST00000533419 NACADO15069 1562 aa40.47■■■■■ 4.07
CDC42EP2-202ENST00000533419 DCAF8L2P0C7V8 631 aa40.24■■■■■ 4.03
CDC42EP2-202ENST00000533419 MYO15BQ96JP2 1530 aa40.03■■■■■ 4
CDC42EP2-202ENST00000533419 UNC13AQ9UPW8 1703 aa39.84■■■■□ 3.97
CDC42EP2-202ENST00000533419 ZCCHC6Q5VYS8 1495 aaKnown RBP39.82■■■■□ 3.97
CDC42EP2-202ENST00000533419 DCAF1Q9Y4B6 1507 aa39.65■■■■□ 3.94
CDC42EP2-202ENST00000533419 PABPN1Q86U42 306 aaKnown RBP eCLIP39.6■■■■□ 3.93
CDC42EP2-202ENST00000533419 DNAJC5BQ9UF47 199 aa39.52■■■■□ 3.92
CDC42EP2-202ENST00000533419 BICRAQ9NZM4 1560 aa39.47■■■■□ 3.91
CDC42EP2-202ENST00000533419 SCRIBQ14160 1630 aa39.11■■■■□ 3.85
CDC42EP2-202ENST00000533419 SHROOM4Q9ULL8 1493 aa38.98■■■■□ 3.83
CDC42EP2-202ENST00000533419 EIF4G1Q04637 1599 aaKnown RBP38.47■■■■□ 3.75
CDC42EP2-202ENST00000533419 CC2D2AQ9P2K1 1620 aa38.46■■■■□ 3.75
CDC42EP2-202ENST00000533419 CECR2Q9BXF3 1484 aa38.26■■■■□ 3.72
CDC42EP2-202ENST00000533419 SMARCA4P51532 1647 aa37.36■■■■□ 3.57
CDC42EP2-202ENST00000533419 NCAPD3P42695 1498 aa37.33■■■■□ 3.57
CDC42EP2-202ENST00000533419 ATAD2BQ9ULI0 1458 aa37.26■■■■□ 3.55
CDC42EP2-202ENST00000533419 SMARCA2P51531 1590 aa37.21■■■■□ 3.55
CDC42EP2-202ENST00000533419 BAZ1AQ9NRL2 1556 aaPredicted RBP37.21■■■■□ 3.55
CDC42EP2-202ENST00000533419 HMGXB3Q12766 1538 aa37.11■■■■□ 3.53
CDC42EP2-202ENST00000533419 PEG3Q9GZU2 1588 aa37■■■■□ 3.51
CDC42EP2-202ENST00000533419 MROH2BQ7Z745 1585 aa36.95■■■■□ 3.51
CDC42EP2-202ENST00000533419 BAZ1BQ9UIG0 1483 aaKnown RBP36.93■■■■□ 3.5
CDC42EP2-202ENST00000533419 ERCC6Q03468 1493 aa36.68■■■■□ 3.46
CDC42EP2-202ENST00000533419 NESP48681 1621 aa36.63■■■■□ 3.45
CDC42EP2-202ENST00000533419 WIZO95785 1651 aa36.56■■■■□ 3.44
CDC42EP2-202ENST00000533419 CUX2O14529 1486 aa36.51■■■■□ 3.44
CDC42EP2-202ENST00000533419 LAMC3Q9Y6N6 1575 aa36.46■■■■□ 3.43
CDC42EP2-202ENST00000533419 RSF1Q96T23 1441 aaPredicted RBP36.3■■■■□ 3.4
CDC42EP2-202ENST00000533419 KIF21AQ7Z4S6 1674 aa36.25■■■■□ 3.39
CDC42EP2-202ENST00000533419 THOC2Q8NI27 1593 aaKnown RBP36.23■■■■□ 3.39
CDC42EP2-202ENST00000533419 PDS5BQ9NTI5 1447 aa36.2■■■■□ 3.39
CDC42EP2-202ENST00000533419 CADPSQ9ULU8 1353 aa36.19■■■■□ 3.38
CDC42EP2-202ENST00000533419 TOP2AP11388 1531 aaKnown RBP36.11■■■■□ 3.37
CDC42EP2-202ENST00000533419 DNAJC5Q9H3Z4 198 aa36.04■■■■□ 3.36
CDC42EP2-202ENST00000533419 MRC2Q9UBG0 1479 aa35.88■■■■□ 3.33
CDC42EP2-202ENST00000533419 CFTRP13569 1480 aa35.87■■■■□ 3.33
CDC42EP2-202ENST00000533419 CEP164Q9UPV0 1460 aa35.81■■■■□ 3.32
CDC42EP2-202ENST00000533419 WDR62O43379 1518 aa35.8■■■■□ 3.32
CDC42EP2-202ENST00000533419 FANCD2Q9BXW9 1451 aa35.8■■■■□ 3.32
CDC42EP2-202ENST00000533419 PRDM2Q13029 1718 aa35.68■■■■□ 3.3
CDC42EP2-202ENST00000533419 CCDC88BA6NC98 1476 aa35.67■■■■□ 3.3
CDC42EP2-202ENST00000533419 URB2Q14146 1524 aaKnown RBP35.49■■■■□ 3.27
CDC42EP2-202ENST00000533419 TOPBP1Q92547 1522 aa35.17■■■■□ 3.22
CDC42EP2-202ENST00000533419 ABCC8Q09428 1581 aa35.13■■■■□ 3.21
CDC42EP2-202ENST00000533419 DNMBPQ6XZF7 1577 aa35.09■■■■□ 3.21
CDC42EP2-202ENST00000533419 IFT140Q96RY7 1462 aa35.08■■■■□ 3.21
CDC42EP2-202ENST00000533419 ZNF608Q9ULD9 1512 aaPredicted RBP34.98■■■■□ 3.19
CDC42EP2-202ENST00000533419 SUPT5HO00267 1087 aaKnown RBP34.91■■■■□ 3.18
CDC42EP2-202ENST00000533419 TARBP1Q13395 1621 aaKnown RBP34.86■■■■□ 3.17
CDC42EP2-202ENST00000533419 OSCARQ8IYS5 282 aa34.86■■■■□ 3.17
CDC42EP2-202ENST00000533419 EIF4G3O43432 1585 aaKnown RBP34.86■■■■□ 3.17
CDC42EP2-202ENST00000533419 POLA1P09884 1462 aaPredicted RBP34.84■■■■□ 3.17
CDC42EP2-202ENST00000533419 AQRO60306 1485 aaKnown RBP eCLIP34.71■■■■□ 3.15
CDC42EP2-202ENST00000533419 CUX1P39880 1505 aa34.7■■■■□ 3.14
CDC42EP2-202ENST00000533419 RAD54L2Q9Y4B4 1467 aa34.68■■■■□ 3.14
CDC42EP2-202ENST00000533419 FGD5Q6ZNL6 1462 aa34.66■■■■□ 3.14
CDC42EP2-202ENST00000533419 SOGA1O94964 1423 aa34.65■■■■□ 3.14
CDC42EP2-202ENST00000533419 TRIM41Q8WV44 630 aa34.59■■■■□ 3.13
CDC42EP2-202ENST00000533419 CHD1O14646 1710 aa34.57■■■■□ 3.12
CDC42EP2-202ENST00000533419 WDR97A6NE52 1622 aa34.55■■■■□ 3.12
CDC42EP2-202ENST00000533419 TDRD9Q8NDG6 1382 aaKnown RBP34.53■■■■□ 3.12
CDC42EP2-202ENST00000533419 RIMBP3CA6NJZ7 1639 aa34.44■■■■□ 3.1
CDC42EP2-202ENST00000533419 RIMBP3BA6NNM3 1639 aa34.44■■■■□ 3.1
CDC42EP2-202ENST00000533419 RIMBP3Q9UFD9 1639 aa34.44■■■■□ 3.1
CDC42EP2-202ENST00000533419 SNAPC4Q5SXM2 1469 aa34.38■■■■□ 3.09
CDC42EP2-202ENST00000533419 FBLN2P98095 1184 aa34.37■■■■□ 3.09
CDC42EP2-202ENST00000533419 ARHGEF11O15085 1522 aa34.34■■■■□ 3.09
CDC42EP2-202ENST00000533419 GRIN2BQ13224 1484 aa34.33■■■■□ 3.09
CDC42EP2-202ENST00000533419 MAGI1Q96QZ7 1491 aaPredicted RBP34.31■■■■□ 3.08
CDC42EP2-202ENST00000533419 PBRM1Q86U86 1689 aa34.31■■■■□ 3.08
CDC42EP2-202ENST00000533419 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
CDC42EP2-202ENST00000533419 BIVM-ERCC5R4GMW8 1640 aa34.29■■■■□ 3.08
CDC42EP2-202ENST00000533419 TOP2BQ02880 1626 aa34.26■■■■□ 3.08
CDC42EP2-202ENST00000533419 GAPVD1Q14C86 1478 aa34.26■■■■□ 3.07
CDC42EP2-202ENST00000533419 ABCA5Q8WWZ7 1642 aa34.25■■■■□ 3.07
CDC42EP2-202ENST00000533419 WRNQ14191 1432 aaPredicted RBP eCLIP34.23■■■■□ 3.07
CDC42EP2-202ENST00000533419 SYNJ1O43426 1573 aa34.23■■■■□ 3.07
CDC42EP2-202ENST00000533419 CHMP7Q8WUX9 453 aaPredicted RBP34.19■■■■□ 3.06
CDC42EP2-202ENST00000533419 SYNJ2O15056 1496 aa34.19■■■■□ 3.06
CDC42EP2-202ENST00000533419 CLASP1Q7Z460 1538 aa34.13■■■■□ 3.05
CDC42EP2-202ENST00000533419 ARAP1Q96P48 1450 aa34.02■■■■□ 3.04
CDC42EP2-202ENST00000533419 CYB5RLQ6IPT4 315 aa34.01■■■■□ 3.03
CDC42EP2-202ENST00000533419 ADAMTS12P58397 1594 aa33.96■■■■□ 3.03
CDC42EP2-202ENST00000533419 GRIN2AQ12879 1464 aa33.89■■■■□ 3.02
CDC42EP2-202ENST00000533419 ERICH3Q5RHP9 1530 aa33.89■■■■□ 3.02
CDC42EP2-202ENST00000533419 FHAD1B1AJZ9 1412 aa33.83■■■■□ 3.01
CDC42EP2-202ENST00000533419 CEP170Q5SW79 1584 aa33.78■■■■□ 3
CDC42EP2-202ENST00000533419 NUP160Q12769 1436 aa33.77■■■■□ 3
CDC42EP2-202ENST00000533419 SHROOM2Q13796 1616 aa33.63■■■□□ 2.97
CDC42EP2-202ENST00000533419 ERCC6L2Q5T890 1561 aa33.61■■■□□ 2.97
CDC42EP2-202ENST00000533419 KIF27Q86VH2 1401 aa33.56■■■□□ 2.96
CDC42EP2-202ENST00000533419 TRHP20396 242 aaPredicted RBP33.51■■■□□ 2.95
CDC42EP2-202ENST00000533419 IGF1RP08069 1367 aa33.49■■■□□ 2.95
CDC42EP2-202ENST00000533419 CUL7Q14999 1698 aa33.49■■■□□ 2.95
CDC42EP2-202ENST00000533419 RUSC2Q8N2Y8 1516 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms