RNA–Protein interactions for RNA: ENST00000449350.6

LINC02028-204, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 3 BASIC

Gene LINC02028, Length 1,419 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-204ENST00000449350 NISCHQ9Y2I1 1504 aa43.63■■■■■ 4.57
LINC02028-204ENST00000449350 CCDC180Q9P1Z9 1646 aa38.44■■■■□ 3.74
LINC02028-204ENST00000449350 ZCCHC6Q5VYS8 1495 aaKnown RBP36.63■■■■□ 3.45
LINC02028-204ENST00000449350 ABCC9O60706 1549 aa36.37■■■■□ 3.41
LINC02028-204ENST00000449350 DCAF1Q9Y4B6 1507 aa36.19■■■■□ 3.38
LINC02028-204ENST00000449350 MYO15BQ96JP2 1530 aa35.92■■■■□ 3.34
LINC02028-204ENST00000449350 DCAF8L2P0C7V8 631 aa35.8■■■■□ 3.32
LINC02028-204ENST00000449350 NACADO15069 1562 aa35.77■■■■□ 3.32
LINC02028-204ENST00000449350 RB1CC1Q8TDY2 1594 aa35.56■■■■□ 3.28
LINC02028-204ENST00000449350 SCRIBQ14160 1630 aa35.11■■■■□ 3.21
LINC02028-204ENST00000449350 SHROOM4Q9ULL8 1493 aa35.07■■■■□ 3.21
LINC02028-204ENST00000449350 UNC13AQ9UPW8 1703 aa34.9■■■■□ 3.18
LINC02028-204ENST00000449350 BICRAQ9NZM4 1560 aa34.44■■■■□ 3.1
LINC02028-204ENST00000449350 PABPN1Q86U42 306 aaKnown RBP eCLIP34.06■■■■□ 3.04
LINC02028-204ENST00000449350 CECR2Q9BXF3 1484 aa33.82■■■■□ 3
LINC02028-204ENST00000449350 BAZ1AQ9NRL2 1556 aaPredicted RBP33.78■■■■□ 3
LINC02028-204ENST00000449350 SMARCA4P51532 1647 aa33.69■■■□□ 2.98
LINC02028-204ENST00000449350 MROH2BQ7Z745 1585 aa33.64■■■□□ 2.98
LINC02028-204ENST00000449350 RSF1Q96T23 1441 aaPredicted RBP33.62■■■□□ 2.97
LINC02028-204ENST00000449350 SUPT5HO00267 1087 aaKnown RBP33.51■■■□□ 2.95
LINC02028-204ENST00000449350 EIF4G1Q04637 1599 aaKnown RBP33.43■■■□□ 2.94
LINC02028-204ENST00000449350 WIZO95785 1651 aa33.39■■■□□ 2.94
LINC02028-204ENST00000449350 PEG3Q9GZU2 1588 aa33.33■■■□□ 2.93
LINC02028-204ENST00000449350 SMARCA2P51531 1590 aa33.2■■■□□ 2.91
LINC02028-204ENST00000449350 ATAD2BQ9ULI0 1458 aa33.13■■■□□ 2.89
LINC02028-204ENST00000449350 TOP2AP11388 1531 aaKnown RBP33.11■■■□□ 2.89
LINC02028-204ENST00000449350 CC2D2AQ9P2K1 1620 aa33.02■■■□□ 2.88
LINC02028-204ENST00000449350 HMGXB3Q12766 1538 aa32.97■■■□□ 2.87
LINC02028-204ENST00000449350 BAZ1BQ9UIG0 1483 aaKnown RBP32.96■■■□□ 2.87
LINC02028-204ENST00000449350 NCAPD3P42695 1498 aa32.92■■■□□ 2.86
LINC02028-204ENST00000449350 CCDC88BA6NC98 1476 aa32.62■■■□□ 2.81
LINC02028-204ENST00000449350 DNAJC5BQ9UF47 199 aa32.22■■■□□ 2.75
LINC02028-204ENST00000449350 PRDM2Q13029 1718 aa32.18■■■□□ 2.74
LINC02028-204ENST00000449350 CFTRP13569 1480 aa32.09■■■□□ 2.73
LINC02028-204ENST00000449350 CADPSQ9ULU8 1353 aa31.99■■■□□ 2.71
LINC02028-204ENST00000449350 LAMC3Q9Y6N6 1575 aa31.96■■■□□ 2.71
LINC02028-204ENST00000449350 CHIC1Q5VXU3 224 aa31.94■■■□□ 2.7
LINC02028-204ENST00000449350 ABCC8Q09428 1581 aa31.84■■■□□ 2.69
LINC02028-204ENST00000449350 NESP48681 1621 aa31.82■■■□□ 2.68
LINC02028-204ENST00000449350 FANCD2Q9BXW9 1451 aa31.69■■■□□ 2.66
LINC02028-204ENST00000449350 WRNQ14191 1432 aaPredicted RBP eCLIP31.69■■■□□ 2.66
LINC02028-204ENST00000449350 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
LINC02028-204ENST00000449350 BIVM-ERCC5R4GMW8 1640 aa31.62■■■□□ 2.65
LINC02028-204ENST00000449350 PDS5BQ9NTI5 1447 aa31.61■■■□□ 2.65
LINC02028-204ENST00000449350 KIF21AQ7Z4S6 1674 aa31.61■■■□□ 2.65
LINC02028-204ENST00000449350 TRIM41Q8WV44 630 aa31.6■■■□□ 2.65
LINC02028-204ENST00000449350 TOP2BQ02880 1626 aa31.58■■■□□ 2.65
LINC02028-204ENST00000449350 CEP164Q9UPV0 1460 aa31.57■■■□□ 2.64
LINC02028-204ENST00000449350 CUX1P39880 1505 aa31.52■■■□□ 2.64
LINC02028-204ENST00000449350 DNMBPQ6XZF7 1577 aa31.44■■■□□ 2.62
LINC02028-204ENST00000449350 TOPBP1Q92547 1522 aa31.33■■■□□ 2.61
LINC02028-204ENST00000449350 URB2Q14146 1524 aaKnown RBP31.32■■■□□ 2.6
LINC02028-204ENST00000449350 MRC2Q9UBG0 1479 aa31.29■■■□□ 2.6
LINC02028-204ENST00000449350 ERCC6Q03468 1493 aa31.27■■■□□ 2.6
LINC02028-204ENST00000449350 FGD5Q6ZNL6 1462 aa31.23■■■□□ 2.59
LINC02028-204ENST00000449350 THOC2Q8NI27 1593 aaKnown RBP31.21■■■□□ 2.59
LINC02028-204ENST00000449350 WDR62O43379 1518 aa31.19■■■□□ 2.58
LINC02028-204ENST00000449350 POLA1P09884 1462 aaPredicted RBP31.13■■■□□ 2.57
LINC02028-204ENST00000449350 EEA1Q15075 1411 aa31.11■■■□□ 2.57
LINC02028-204ENST00000449350 SOGA1O94964 1423 aa31.08■■■□□ 2.57
LINC02028-204ENST00000449350 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
LINC02028-204ENST00000449350 RUSC2Q8N2Y8 1516 aa30.98■■■□□ 2.55
LINC02028-204ENST00000449350 ABCA10Q8WWZ4 1543 aa30.98■■■□□ 2.55
LINC02028-204ENST00000449350 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.55
LINC02028-204ENST00000449350 RAD54L2Q9Y4B4 1467 aa30.94■■■□□ 2.54
LINC02028-204ENST00000449350 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
LINC02028-204ENST00000449350 CUX2O14529 1486 aa30.91■■■□□ 2.54
LINC02028-204ENST00000449350 FAM9AQ8IZU1 332 aaPredicted RBP30.91■■■□□ 2.54
LINC02028-204ENST00000449350 ABCA5Q8WWZ7 1642 aa30.84■■■□□ 2.53
LINC02028-204ENST00000449350 IFT140Q96RY7 1462 aa30.84■■■□□ 2.53
LINC02028-204ENST00000449350 KIF21BO75037 1637 aa30.8■■■□□ 2.52
LINC02028-204ENST00000449350 CSRNP3Q8WYN3 585 aa30.76■■■□□ 2.51
LINC02028-204ENST00000449350 PBRM1Q86U86 1689 aa30.69■■■□□ 2.5
LINC02028-204ENST00000449350 CUL7Q14999 1698 aa30.66■■■□□ 2.5
LINC02028-204ENST00000449350 GAPVD1Q14C86 1478 aa30.66■■■□□ 2.5
LINC02028-204ENST00000449350 ERICH3Q5RHP9 1530 aa30.65■■■□□ 2.5
LINC02028-204ENST00000449350 EIF4G3O43432 1585 aaKnown RBP30.64■■■□□ 2.5
LINC02028-204ENST00000449350 GOLGA3Q08378 1498 aa30.64■■■□□ 2.49
LINC02028-204ENST00000449350 PRXQ9BXM0 1461 aa30.64■■■□□ 2.49
LINC02028-204ENST00000449350 TDRD9Q8NDG6 1382 aaKnown RBP30.62■■■□□ 2.49
LINC02028-204ENST00000449350 IGF1RP08069 1367 aa30.59■■■□□ 2.49
LINC02028-204ENST00000449350 ZNF608Q9ULD9 1512 aaPredicted RBP30.59■■■□□ 2.49
LINC02028-204ENST00000449350 LOC105371045A0A1W2PR82 267 aa30.58■■■□□ 2.49
LINC02028-204ENST00000449350 AQRO60306 1485 aaKnown RBP eCLIP30.52■■■□□ 2.48
LINC02028-204ENST00000449350 RAPGEF2Q9Y4G8 1499 aa30.52■■■□□ 2.48
LINC02028-204ENST00000449350 GRIN2BQ13224 1484 aa30.5■■■□□ 2.47
LINC02028-204ENST00000449350 ADAMTS12P58397 1594 aa30.47■■■□□ 2.47
LINC02028-204ENST00000449350 CARMIL1Q5VZK9 1371 aa30.46■■■□□ 2.47
LINC02028-204ENST00000449350 EHMT2Q96KQ7 1210 aa30.41■■■□□ 2.46
LINC02028-204ENST00000449350 TNIKQ9UKE5 1360 aa30.39■■■□□ 2.46
LINC02028-204ENST00000449350 MAGI1Q96QZ7 1491 aaPredicted RBP30.34■■■□□ 2.45
LINC02028-204ENST00000449350 SNAPC4Q5SXM2 1469 aa30.33■■■□□ 2.45
LINC02028-204ENST00000449350 FHAD1B1AJZ9 1412 aa30.33■■■□□ 2.45
LINC02028-204ENST00000449350 CTTNBP2Q8WZ74 1663 aa30.3■■■□□ 2.44
LINC02028-204ENST00000449350 UBTFP17480 764 aaKnown RBP30.3■■■□□ 2.44
LINC02028-204ENST00000449350 CEP162Q5TB80 1403 aa30.22■■■□□ 2.43
LINC02028-204ENST00000449350 SYNJ2O15056 1496 aa30.19■■■□□ 2.42
LINC02028-204ENST00000449350 GRIN2AQ12879 1464 aa30.15■■■□□ 2.42
LINC02028-204ENST00000449350 CHD1O14646 1710 aa30.08■■■□□ 2.41
LINC02028-204ENST00000449350 CLIP1P30622 1438 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 1173 ms