RNA–Protein interactions for RNA: ENST00000167106.8

VASH1-201, Transcript of vasohibin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VASH1, Length 5,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASH1-201ENST00000167106 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
VASH1-201ENST00000167106 NISCHQ9Y2I1 1504 aa29.33■■■□□ 2.29
VASH1-201ENST00000167106 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
VASH1-201ENST00000167106 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
VASH1-201ENST00000167106 EHMT2Q96KQ7 1210 aa27.96■■■□□ 2.07
VASH1-201ENST00000167106 APLP2Q06481 763 aa27.85■■■□□ 2.05
VASH1-201ENST00000167106 FAM9AQ8IZU1 332 aaPredicted RBP27.78■■■□□ 2.04
VASH1-201ENST00000167106 PELP1Q8IZL8 1130 aaKnown RBP27.39■■□□□ 1.97
VASH1-201ENST00000167106 TTBK1Q5TCY1 1321 aaPredicted RBP27■■□□□ 1.91
VASH1-201ENST00000167106 RANGAP1P46060 587 aaPredicted RBP26.94■■□□□ 1.9
VASH1-201ENST00000167106 TRIM41Q8WV44 630 aa26.94■■□□□ 1.9
VASH1-201ENST00000167106 ATP1B4Q9UN42 357 aaPredicted RBP26.88■■□□□ 1.89
VASH1-201ENST00000167106 UBTFP17480 764 aaKnown RBP26.69■■□□□ 1.86
VASH1-201ENST00000167106 PCGF6Q9BYE7 350 aa26.69■■□□□ 1.86
VASH1-201ENST00000167106 ZEB1P37275 1124 aaPredicted RBP26.51■■□□□ 1.83
VASH1-201ENST00000167106 CCER1Q8TC90 406 aaPredicted RBP26.48■■□□□ 1.83
VASH1-201ENST00000167106 CENPBP07199 599 aaPredicted RBP26.3■■□□□ 1.8
VASH1-201ENST00000167106 ERICH6Q7L0X2 663 aa26.13■■□□□ 1.77
VASH1-201ENST00000167106 MYT1LQ9UL68 1186 aa26.07■■□□□ 1.76
VASH1-201ENST00000167106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.05■■□□□ 1.76
VASH1-201ENST00000167106 HNRNPUL2Q1KMD3 747 aaKnown RBP26.05■■□□□ 1.76
VASH1-201ENST00000167106 NEFLP07196 543 aa25.95■■□□□ 1.75
VASH1-201ENST00000167106 PPARGC1BQ86YN6 1023 aaKnown RBP25.84■■□□□ 1.73
VASH1-201ENST00000167106 ITGAEP38570 1179 aa25.74■■□□□ 1.71
VASH1-201ENST00000167106 TRIM26Q12899 539 aaPredicted RBP25.7■■□□□ 1.71
VASH1-201ENST00000167106 YTHDC1Q96MU7 727 aaKnown RBP25.66■■□□□ 1.7
VASH1-201ENST00000167106 ABCC9O60706 1549 aa25.6■■□□□ 1.69
VASH1-201ENST00000167106 POLR3GLQ9BT43 218 aa25.59■■□□□ 1.69
VASH1-201ENST00000167106 PABPN1Q86U42 306 aaKnown RBP eCLIP25.5■■□□□ 1.67
VASH1-201ENST00000167106 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
VASH1-201ENST00000167106 LOC105371045A0A1W2PR82 267 aa25.37■■□□□ 1.65
VASH1-201ENST00000167106 SLC4A1APQ9BWU0 796 aaKnown RBP25.29■■□□□ 1.64
VASH1-201ENST00000167106 DAXXQ9UER7 740 aaPredicted RBP25.25■■□□□ 1.63
VASH1-201ENST00000167106 FAM50AQ14320 339 aaKnown RBP25.2■■□□□ 1.63
VASH1-201ENST00000167106 CNGB1Q14028 1251 aaPredicted RBP25.16■■□□□ 1.62
VASH1-201ENST00000167106 HRCP23327 699 aa25.14■■□□□ 1.61
VASH1-201ENST00000167106 TRIM52Q96A61 297 aa25.11■■□□□ 1.61
VASH1-201ENST00000167106 FBLN2P98095 1184 aa25.08■■□□□ 1.61
VASH1-201ENST00000167106 NEUROD1Q13562 356 aa24.82■■□□□ 1.56
VASH1-201ENST00000167106 MYT1Q01538 1121 aa24.77■■□□□ 1.56
VASH1-201ENST00000167106 CLSPNQ9HAW4 1339 aa24.77■■□□□ 1.56
VASH1-201ENST00000167106 ZNF326Q5BKZ1 582 aaKnown RBP24.74■■□□□ 1.55
VASH1-201ENST00000167106 DIEXFQ68CQ4 756 aaKnown RBP24.68■■□□□ 1.54
VASH1-201ENST00000167106 BCANQ96GW7 911 aa24.64■■□□□ 1.54
VASH1-201ENST00000167106 ZNF316A6NFI3 1004 aaPredicted RBP24.63■■□□□ 1.53
VASH1-201ENST00000167106 CDK11AQ9UQ88 783 aaPredicted RBP24.62■■□□□ 1.53
VASH1-201ENST00000167106 P3H3Q8IVL6 736 aa24.61■■□□□ 1.53
VASH1-201ENST00000167106 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.53
VASH1-201ENST00000167106 ARID3CA6NKF2 412 aa24.57■■□□□ 1.52
VASH1-201ENST00000167106 ANP32CO43423 234 aa24.56■■□□□ 1.52
VASH1-201ENST00000167106 ZBTB47Q9UFB7 747 aaPredicted RBP24.54■■□□□ 1.52
VASH1-201ENST00000167106 SCRIBQ14160 1630 aa24.52■■□□□ 1.52
VASH1-201ENST00000167106 ZNF777Q9ULD5 760 aaPredicted RBP24.52■■□□□ 1.52
VASH1-201ENST00000167106 ESF1Q9H501 851 aaKnown RBP24.51■■□□□ 1.51
VASH1-201ENST00000167106 NEFMP07197 916 aa24.5■■□□□ 1.51
VASH1-201ENST00000167106 NPM1P06748 294 aaKnown RBP eCLIP24.43■■□□□ 1.5
VASH1-201ENST00000167106 SLC24A1O60721 1099 aa24.42■■□□□ 1.5
VASH1-201ENST00000167106 RTL5Q5HYW3 569 aaPredicted RBP24.42■■□□□ 1.5
VASH1-201ENST00000167106 CANXP27824 592 aaKnown RBP24.34■■□□□ 1.49
VASH1-201ENST00000167106 STAG3Q9UJ98 1225 aa24.29■■□□□ 1.48
VASH1-201ENST00000167106 ZCCHC6Q5VYS8 1495 aaKnown RBP24.2■■□□□ 1.46
VASH1-201ENST00000167106 CHGAP10645 457 aaKnown RBP24.2■■□□□ 1.46
VASH1-201ENST00000167106 TONSLQ96HA7 1378 aa24.09■■□□□ 1.45
VASH1-201ENST00000167106 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.45
VASH1-201ENST00000167106 CCDC180Q9P1Z9 1646 aa24.08■■□□□ 1.44
VASH1-201ENST00000167106 BCL11AQ9H165 835 aa24.07■■□□□ 1.44
VASH1-201ENST00000167106 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
VASH1-201ENST00000167106 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
VASH1-201ENST00000167106 TSPY4P0CV99 314 aa23.97■■□□□ 1.43
VASH1-201ENST00000167106 TSPY10P0CW01 314 aa23.97■■□□□ 1.43
VASH1-201ENST00000167106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.96■■□□□ 1.43
VASH1-201ENST00000167106 CHIC2Q9UKJ5 165 aa23.9■■□□□ 1.42
VASH1-201ENST00000167106 MTUS2Q5JR59 1369 aa23.89■■□□□ 1.41
VASH1-201ENST00000167106 GTF3C3Q9Y5Q9 886 aa23.89■■□□□ 1.41
VASH1-201ENST00000167106 ANP32AP39687 249 aaKnown RBP23.75■■□□□ 1.39
VASH1-201ENST00000167106 PLEKHD1A6NEE1 506 aa23.69■■□□□ 1.38
VASH1-201ENST00000167106 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
VASH1-201ENST00000167106 KDM2AQ9Y2K7 1162 aa23.68■■□□□ 1.38
VASH1-201ENST00000167106 CLIP1P30622 1438 aa23.68■■□□□ 1.38
VASH1-201ENST00000167106 WDR43Q15061 677 aaKnown RBP eCLIP23.67■■□□□ 1.38
VASH1-201ENST00000167106 KCNH8Q96L42 1107 aa23.66■■□□□ 1.38
VASH1-201ENST00000167106 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
VASH1-201ENST00000167106 TMC1Q8TDI8 760 aa23.66■■□□□ 1.38
VASH1-201ENST00000167106 FAM9BQ8IZU0 186 aa23.65■■□□□ 1.38
VASH1-201ENST00000167106 NACADO15069 1562 aa23.65■■□□□ 1.38
VASH1-201ENST00000167106 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
VASH1-201ENST00000167106 HNRNPUQ00839 825 aaKnown RBP eCLIP23.64■■□□□ 1.38
VASH1-201ENST00000167106 PPP1R15AO75807 674 aaPredicted RBP23.64■■□□□ 1.38
VASH1-201ENST00000167106 DDX10Q13206 875 aaKnown RBP23.64■■□□□ 1.37
VASH1-201ENST00000167106 ACIN1Q9UKV3 1341 aaKnown RBP23.63■■□□□ 1.37
VASH1-201ENST00000167106 BAZ1BQ9UIG0 1483 aaKnown RBP23.63■■□□□ 1.37
VASH1-201ENST00000167106 UPF2Q9HAU5 1272 aaKnown RBP23.62■■□□□ 1.37
VASH1-201ENST00000167106 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.62■■□□□ 1.37
VASH1-201ENST00000167106 EEA1Q15075 1411 aa23.62■■□□□ 1.37
VASH1-201ENST00000167106 HSP90AA1P07900 732 aaKnown RBP23.59■■□□□ 1.37
VASH1-201ENST00000167106 NPM2Q86SE8 214 aaKnown RBP23.58■■□□□ 1.37
VASH1-201ENST00000167106 GOLGA3Q08378 1498 aa23.55■■□□□ 1.36
VASH1-201ENST00000167106 SALL2Q9Y467 1007 aaPredicted RBP23.54■■□□□ 1.36
VASH1-201ENST00000167106 ERCC6Q03468 1493 aa23.53■■□□□ 1.36
VASH1-201ENST00000167106 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms