RNA–Protein interactions for RNA: ENST00000327575.6

IFNLR1-202, Transcript of interferon lambda receptor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IFNLR1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNLR1-202ENST00000327575 NISCHQ9Y2I1 1504 aa45.82■■■■■ 4.93
IFNLR1-202ENST00000327575 CCDC180Q9P1Z9 1646 aa40.82■■■■■ 4.13
IFNLR1-202ENST00000327575 ABCC9O60706 1549 aa40.2■■■■■ 4.03
IFNLR1-202ENST00000327575 RB1CC1Q8TDY2 1594 aa38.57■■■■□ 3.77
IFNLR1-202ENST00000327575 DCAF8L2P0C7V8 631 aa38.54■■■■□ 3.76
IFNLR1-202ENST00000327575 NACADO15069 1562 aa38.46■■■■□ 3.75
IFNLR1-202ENST00000327575 MYO15BQ96JP2 1530 aa38.14■■■■□ 3.7
IFNLR1-202ENST00000327575 ZCCHC6Q5VYS8 1495 aaKnown RBP38.09■■■■□ 3.69
IFNLR1-202ENST00000327575 DCAF1Q9Y4B6 1507 aa37.88■■■■□ 3.66
IFNLR1-202ENST00000327575 UNC13AQ9UPW8 1703 aa37.64■■■■□ 3.62
IFNLR1-202ENST00000327575 PABPN1Q86U42 306 aaKnown RBP eCLIP37.57■■■■□ 3.6
IFNLR1-202ENST00000327575 BICRAQ9NZM4 1560 aa37.35■■■■□ 3.57
IFNLR1-202ENST00000327575 SCRIBQ14160 1630 aa37.24■■■■□ 3.55
IFNLR1-202ENST00000327575 DNAJC5BQ9UF47 199 aa37.09■■■■□ 3.53
IFNLR1-202ENST00000327575 SHROOM4Q9ULL8 1493 aa36.96■■■■□ 3.51
IFNLR1-202ENST00000327575 EIF4G1Q04637 1599 aaKnown RBP36.42■■■■□ 3.42
IFNLR1-202ENST00000327575 CC2D2AQ9P2K1 1620 aa36.33■■■■□ 3.41
IFNLR1-202ENST00000327575 CECR2Q9BXF3 1484 aa36.15■■■■□ 3.38
IFNLR1-202ENST00000327575 SMARCA4P51532 1647 aa35.59■■■■□ 3.29
IFNLR1-202ENST00000327575 BAZ1AQ9NRL2 1556 aaPredicted RBP35.55■■■■□ 3.28
IFNLR1-202ENST00000327575 NCAPD3P42695 1498 aa35.49■■■■□ 3.27
IFNLR1-202ENST00000327575 ATAD2BQ9ULI0 1458 aa35.46■■■■□ 3.27
IFNLR1-202ENST00000327575 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
IFNLR1-202ENST00000327575 MROH2BQ7Z745 1585 aa35.3■■■■□ 3.24
IFNLR1-202ENST00000327575 HMGXB3Q12766 1538 aa35.27■■■■□ 3.24
IFNLR1-202ENST00000327575 PEG3Q9GZU2 1588 aa35.23■■■■□ 3.23
IFNLR1-202ENST00000327575 BAZ1BQ9UIG0 1483 aaKnown RBP35.19■■■■□ 3.22
IFNLR1-202ENST00000327575 WIZO95785 1651 aa34.92■■■■□ 3.18
IFNLR1-202ENST00000327575 RSF1Q96T23 1441 aaPredicted RBP34.83■■■■□ 3.17
IFNLR1-202ENST00000327575 ERCC6Q03468 1493 aa34.71■■■■□ 3.15
IFNLR1-202ENST00000327575 NESP48681 1621 aa34.7■■■■□ 3.15
IFNLR1-202ENST00000327575 LAMC3Q9Y6N6 1575 aa34.6■■■■□ 3.13
IFNLR1-202ENST00000327575 TOP2AP11388 1531 aaKnown RBP34.52■■■■□ 3.12
IFNLR1-202ENST00000327575 CADPSQ9ULU8 1353 aa34.47■■■■□ 3.11
IFNLR1-202ENST00000327575 PDS5BQ9NTI5 1447 aa34.41■■■■□ 3.1
IFNLR1-202ENST00000327575 CUX2O14529 1486 aa34.37■■■■□ 3.09
IFNLR1-202ENST00000327575 SUPT5HO00267 1087 aaKnown RBP34.3■■■■□ 3.08
IFNLR1-202ENST00000327575 KIF21AQ7Z4S6 1674 aa34.27■■■■□ 3.08
IFNLR1-202ENST00000327575 CFTRP13569 1480 aa34.19■■■■□ 3.06
IFNLR1-202ENST00000327575 THOC2Q8NI27 1593 aaKnown RBP34.18■■■■□ 3.06
IFNLR1-202ENST00000327575 CCDC88BA6NC98 1476 aa34.15■■■■□ 3.06
IFNLR1-202ENST00000327575 FANCD2Q9BXW9 1451 aa34.06■■■■□ 3.04
IFNLR1-202ENST00000327575 CEP164Q9UPV0 1460 aa34.04■■■■□ 3.04
IFNLR1-202ENST00000327575 MRC2Q9UBG0 1479 aa34.03■■■■□ 3.04
IFNLR1-202ENST00000327575 WDR62O43379 1518 aa33.89■■■■□ 3.02
IFNLR1-202ENST00000327575 PRDM2Q13029 1718 aa33.89■■■■□ 3.02
IFNLR1-202ENST00000327575 URB2Q14146 1524 aaKnown RBP33.7■■■□□ 2.99
IFNLR1-202ENST00000327575 DNAJC5Q9H3Z4 198 aa33.63■■■□□ 2.97
IFNLR1-202ENST00000327575 ABCC8Q09428 1581 aa33.51■■■□□ 2.96
IFNLR1-202ENST00000327575 TOPBP1Q92547 1522 aa33.48■■■□□ 2.95
IFNLR1-202ENST00000327575 DNMBPQ6XZF7 1577 aa33.41■■■□□ 2.94
IFNLR1-202ENST00000327575 IFT140Q96RY7 1462 aa33.34■■■□□ 2.93
IFNLR1-202ENST00000327575 ZNF608Q9ULD9 1512 aaPredicted RBP33.18■■■□□ 2.9
IFNLR1-202ENST00000327575 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
IFNLR1-202ENST00000327575 CUX1P39880 1505 aa33.12■■■□□ 2.89
IFNLR1-202ENST00000327575 TARBP1Q13395 1621 aaKnown RBP33.1■■■□□ 2.89
IFNLR1-202ENST00000327575 SOGA1O94964 1423 aa33.09■■■□□ 2.89
IFNLR1-202ENST00000327575 FGD5Q6ZNL6 1462 aa33.07■■■□□ 2.88
IFNLR1-202ENST00000327575 RAD54L2Q9Y4B4 1467 aa33.05■■■□□ 2.88
IFNLR1-202ENST00000327575 EIF4G3O43432 1585 aaKnown RBP33.03■■■□□ 2.88
IFNLR1-202ENST00000327575 AQRO60306 1485 aaKnown RBP eCLIP33■■■□□ 2.87
IFNLR1-202ENST00000327575 OSCARQ8IYS5 282 aa33■■■□□ 2.87
IFNLR1-202ENST00000327575 TDRD9Q8NDG6 1382 aaKnown RBP32.92■■■□□ 2.86
IFNLR1-202ENST00000327575 WRNQ14191 1432 aaPredicted RBP eCLIP32.88■■■□□ 2.85
IFNLR1-202ENST00000327575 WDR97A6NE52 1622 aa32.85■■■□□ 2.85
IFNLR1-202ENST00000327575 TOP2BQ02880 1626 aa32.79■■■□□ 2.84
IFNLR1-202ENST00000327575 BIVM-ERCC5R4GMW8 1640 aa32.78■■■□□ 2.84
IFNLR1-202ENST00000327575 SYNJ1O43426 1573 aa32.77■■■□□ 2.84
IFNLR1-202ENST00000327575 FBLN2P98095 1184 aa32.74■■■□□ 2.83
IFNLR1-202ENST00000327575 ABCA10Q8WWZ4 1543 aa32.73■■■□□ 2.83
IFNLR1-202ENST00000327575 GRIN2BQ13224 1484 aa32.7■■■□□ 2.83
IFNLR1-202ENST00000327575 GAPVD1Q14C86 1478 aa32.68■■■□□ 2.82
IFNLR1-202ENST00000327575 SNAPC4Q5SXM2 1469 aa32.67■■■□□ 2.82
IFNLR1-202ENST00000327575 CHD1O14646 1710 aa32.67■■■□□ 2.82
IFNLR1-202ENST00000327575 MAGI1Q96QZ7 1491 aaPredicted RBP32.63■■■□□ 2.81
IFNLR1-202ENST00000327575 CHMP7Q8WUX9 453 aaPredicted RBP32.61■■■□□ 2.81
IFNLR1-202ENST00000327575 PBRM1Q86U86 1689 aa32.59■■■□□ 2.81
IFNLR1-202ENST00000327575 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
IFNLR1-202ENST00000327575 SYNJ2O15056 1496 aa32.51■■■□□ 2.79
IFNLR1-202ENST00000327575 TRIM41Q8WV44 630 aa32.47■■■□□ 2.79
IFNLR1-202ENST00000327575 RIMBP3CA6NJZ7 1639 aa32.39■■■□□ 2.78
IFNLR1-202ENST00000327575 RIMBP3BA6NNM3 1639 aa32.39■■■□□ 2.78
IFNLR1-202ENST00000327575 RIMBP3Q9UFD9 1639 aa32.39■■■□□ 2.78
IFNLR1-202ENST00000327575 ARHGEF11O15085 1522 aa32.37■■■□□ 2.77
IFNLR1-202ENST00000327575 ERICH3Q5RHP9 1530 aa32.35■■■□□ 2.77
IFNLR1-202ENST00000327575 ADAMTS12P58397 1594 aa32.3■■■□□ 2.76
IFNLR1-202ENST00000327575 FHAD1B1AJZ9 1412 aa32.3■■■□□ 2.76
IFNLR1-202ENST00000327575 CLASP1Q7Z460 1538 aa32.29■■■□□ 2.76
IFNLR1-202ENST00000327575 GRIN2AQ12879 1464 aa32.26■■■□□ 2.76
IFNLR1-202ENST00000327575 KIF27Q86VH2 1401 aa32.23■■■□□ 2.75
IFNLR1-202ENST00000327575 CYB5RLQ6IPT4 315 aa32.17■■■□□ 2.74
IFNLR1-202ENST00000327575 CHIC1Q5VXU3 224 aa32.16■■■□□ 2.74
IFNLR1-202ENST00000327575 NUP160Q12769 1436 aa32.11■■■□□ 2.73
IFNLR1-202ENST00000327575 IGF1RP08069 1367 aa32.1■■■□□ 2.73
IFNLR1-202ENST00000327575 CEP170Q5SW79 1584 aa32.09■■■□□ 2.73
IFNLR1-202ENST00000327575 ARAP1Q96P48 1450 aa32.08■■■□□ 2.73
IFNLR1-202ENST00000327575 CUL7Q14999 1698 aa32.01■■■□□ 2.71
IFNLR1-202ENST00000327575 RUSC2Q8N2Y8 1516 aa32.01■■■□□ 2.71
IFNLR1-202ENST00000327575 CARMIL1Q5VZK9 1371 aa31.93■■■□□ 2.7
IFNLR1-202ENST00000327575 SHROOM2Q13796 1616 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms