RNA–Protein interactions for RNA: ENST00000526349.5

RNF170-205, Transcript of ring finger protein 170, humanhuman

TSL 1 (best) BASIC

Gene RNF170, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-205ENST00000526349 NISCHQ9Y2I1 1504 aa46.28■■■■■ 5
RNF170-205ENST00000526349 CCDC180Q9P1Z9 1646 aa41.19■■■■■ 4.18
RNF170-205ENST00000526349 ABCC9O60706 1549 aa40.15■■■■■ 4.02
RNF170-205ENST00000526349 RB1CC1Q8TDY2 1594 aa38.72■■■■□ 3.79
RNF170-205ENST00000526349 NACADO15069 1562 aa38.68■■■■□ 3.78
RNF170-205ENST00000526349 ZCCHC6Q5VYS8 1495 aaKnown RBP38.59■■■■□ 3.77
RNF170-205ENST00000526349 DCAF8L2P0C7V8 631 aa38.51■■■■□ 3.76
RNF170-205ENST00000526349 MYO15BQ96JP2 1530 aa38.5■■■■□ 3.75
RNF170-205ENST00000526349 DCAF1Q9Y4B6 1507 aa38.35■■■■□ 3.73
RNF170-205ENST00000526349 UNC13AQ9UPW8 1703 aa37.8■■■■□ 3.64
RNF170-205ENST00000526349 SCRIBQ14160 1630 aa37.52■■■■□ 3.6
RNF170-205ENST00000526349 BICRAQ9NZM4 1560 aa37.52■■■■□ 3.6
RNF170-205ENST00000526349 PABPN1Q86U42 306 aaKnown RBP eCLIP37.47■■■■□ 3.59
RNF170-205ENST00000526349 SHROOM4Q9ULL8 1493 aa37.22■■■■□ 3.55
RNF170-205ENST00000526349 DNAJC5BQ9UF47 199 aa36.73■■■■□ 3.47
RNF170-205ENST00000526349 EIF4G1Q04637 1599 aaKnown RBP36.53■■■■□ 3.44
RNF170-205ENST00000526349 CC2D2AQ9P2K1 1620 aa36.35■■■■□ 3.41
RNF170-205ENST00000526349 CECR2Q9BXF3 1484 aa36.09■■■■□ 3.37
RNF170-205ENST00000526349 SMARCA4P51532 1647 aa35.92■■■■□ 3.34
RNF170-205ENST00000526349 BAZ1AQ9NRL2 1556 aaPredicted RBP35.9■■■■□ 3.34
RNF170-205ENST00000526349 ATAD2BQ9ULI0 1458 aa35.69■■■■□ 3.3
RNF170-205ENST00000526349 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
RNF170-205ENST00000526349 NCAPD3P42695 1498 aa35.68■■■■□ 3.3
RNF170-205ENST00000526349 MROH2BQ7Z745 1585 aa35.65■■■■□ 3.3
RNF170-205ENST00000526349 PEG3Q9GZU2 1588 aa35.6■■■■□ 3.29
RNF170-205ENST00000526349 HMGXB3Q12766 1538 aa35.54■■■■□ 3.28
RNF170-205ENST00000526349 BAZ1BQ9UIG0 1483 aaKnown RBP35.4■■■■□ 3.26
RNF170-205ENST00000526349 WIZO95785 1651 aa35.27■■■■□ 3.24
RNF170-205ENST00000526349 RSF1Q96T23 1441 aaPredicted RBP35.26■■■■□ 3.23
RNF170-205ENST00000526349 TOP2AP11388 1531 aaKnown RBP34.94■■■■□ 3.18
RNF170-205ENST00000526349 NESP48681 1621 aa34.75■■■■□ 3.15
RNF170-205ENST00000526349 LAMC3Q9Y6N6 1575 aa34.75■■■■□ 3.15
RNF170-205ENST00000526349 ERCC6Q03468 1493 aa34.62■■■■□ 3.13
RNF170-205ENST00000526349 CADPSQ9ULU8 1353 aa34.61■■■■□ 3.13
RNF170-205ENST00000526349 PDS5BQ9NTI5 1447 aa34.48■■■■□ 3.11
RNF170-205ENST00000526349 CCDC88BA6NC98 1476 aa34.48■■■■□ 3.11
RNF170-205ENST00000526349 CFTRP13569 1480 aa34.44■■■■□ 3.1
RNF170-205ENST00000526349 KIF21AQ7Z4S6 1674 aa34.38■■■■□ 3.09
RNF170-205ENST00000526349 SUPT5HO00267 1087 aaKnown RBP34.32■■■■□ 3.09
RNF170-205ENST00000526349 THOC2Q8NI27 1593 aaKnown RBP34.28■■■■□ 3.08
RNF170-205ENST00000526349 CUX2O14529 1486 aa34.28■■■■□ 3.08
RNF170-205ENST00000526349 FANCD2Q9BXW9 1451 aa34.23■■■■□ 3.07
RNF170-205ENST00000526349 PRDM2Q13029 1718 aa34.22■■■■□ 3.07
RNF170-205ENST00000526349 CEP164Q9UPV0 1460 aa34.19■■■■□ 3.06
RNF170-205ENST00000526349 MRC2Q9UBG0 1479 aa34.14■■■■□ 3.06
RNF170-205ENST00000526349 WDR62O43379 1518 aa34.04■■■■□ 3.04
RNF170-205ENST00000526349 URB2Q14146 1524 aaKnown RBP33.88■■■■□ 3.01
RNF170-205ENST00000526349 ABCC8Q09428 1581 aa33.71■■■□□ 2.99
RNF170-205ENST00000526349 TOPBP1Q92547 1522 aa33.69■■■□□ 2.98
RNF170-205ENST00000526349 DNMBPQ6XZF7 1577 aa33.68■■■□□ 2.98
RNF170-205ENST00000526349 IFT140Q96RY7 1462 aa33.48■■■□□ 2.95
RNF170-205ENST00000526349 CUX1P39880 1505 aa33.45■■■□□ 2.95
RNF170-205ENST00000526349 POLA1P09884 1462 aaPredicted RBP33.41■■■□□ 2.94
RNF170-205ENST00000526349 TARBP1Q13395 1621 aaKnown RBP33.33■■■□□ 2.93
RNF170-205ENST00000526349 FGD5Q6ZNL6 1462 aa33.33■■■□□ 2.93
RNF170-205ENST00000526349 ZNF608Q9ULD9 1512 aaPredicted RBP33.28■■■□□ 2.92
RNF170-205ENST00000526349 WRNQ14191 1432 aaPredicted RBP eCLIP33.26■■■□□ 2.91
RNF170-205ENST00000526349 SOGA1O94964 1423 aa33.24■■■□□ 2.91
RNF170-205ENST00000526349 RAD54L2Q9Y4B4 1467 aa33.22■■■□□ 2.91
RNF170-205ENST00000526349 BIVM-ERCC5R4GMW8 1640 aa33.21■■■□□ 2.91
RNF170-205ENST00000526349 EIF4G3O43432 1585 aaKnown RBP33.21■■■□□ 2.91
RNF170-205ENST00000526349 TOP2BQ02880 1626 aa33.21■■■□□ 2.91
RNF170-205ENST00000526349 SYNJ1O43426 1573 aa33.18■■■□□ 2.9
RNF170-205ENST00000526349 WDR97A6NE52 1622 aa33.14■■■□□ 2.9
RNF170-205ENST00000526349 AQRO60306 1485 aaKnown RBP eCLIP33.09■■■□□ 2.89
RNF170-205ENST00000526349 DNAJC5Q9H3Z4 198 aa33.08■■■□□ 2.89
RNF170-205ENST00000526349 ABCA10Q8WWZ4 1543 aa33.03■■■□□ 2.88
RNF170-205ENST00000526349 TDRD9Q8NDG6 1382 aaKnown RBP33.02■■■□□ 2.88
RNF170-205ENST00000526349 ABCA5Q8WWZ7 1642 aa32.91■■■□□ 2.86
RNF170-205ENST00000526349 GRIN2BQ13224 1484 aa32.89■■■□□ 2.86
RNF170-205ENST00000526349 GAPVD1Q14C86 1478 aa32.88■■■□□ 2.85
RNF170-205ENST00000526349 PBRM1Q86U86 1689 aa32.84■■■□□ 2.85
RNF170-205ENST00000526349 SNAPC4Q5SXM2 1469 aa32.82■■■□□ 2.84
RNF170-205ENST00000526349 MAGI1Q96QZ7 1491 aaPredicted RBP32.81■■■□□ 2.84
RNF170-205ENST00000526349 OSCARQ8IYS5 282 aa32.79■■■□□ 2.84
RNF170-205ENST00000526349 CHD1O14646 1710 aa32.75■■■□□ 2.83
RNF170-205ENST00000526349 SYNJ2O15056 1496 aa32.67■■■□□ 2.82
RNF170-205ENST00000526349 ERICH3Q5RHP9 1530 aa32.66■■■□□ 2.82
RNF170-205ENST00000526349 FBLN2P98095 1184 aa32.64■■■□□ 2.82
RNF170-205ENST00000526349 ADAMTS12P58397 1594 aa32.59■■■□□ 2.81
RNF170-205ENST00000526349 CHMP7Q8WUX9 453 aaPredicted RBP32.59■■■□□ 2.81
RNF170-205ENST00000526349 KIF27Q86VH2 1401 aa32.56■■■□□ 2.8
RNF170-205ENST00000526349 FHAD1B1AJZ9 1412 aa32.52■■■□□ 2.8
RNF170-205ENST00000526349 GRIN2AQ12879 1464 aa32.46■■■□□ 2.79
RNF170-205ENST00000526349 TRIM41Q8WV44 630 aa32.45■■■□□ 2.78
RNF170-205ENST00000526349 CLASP1Q7Z460 1538 aa32.43■■■□□ 2.78
RNF170-205ENST00000526349 IGF1RP08069 1367 aa32.39■■■□□ 2.78
RNF170-205ENST00000526349 CUL7Q14999 1698 aa32.38■■■□□ 2.77
RNF170-205ENST00000526349 NUP160Q12769 1436 aa32.32■■■□□ 2.76
RNF170-205ENST00000526349 ARHGEF11O15085 1522 aa32.32■■■□□ 2.76
RNF170-205ENST00000526349 RIMBP3CA6NJZ7 1639 aa32.31■■■□□ 2.76
RNF170-205ENST00000526349 RIMBP3BA6NNM3 1639 aa32.31■■■□□ 2.76
RNF170-205ENST00000526349 RIMBP3Q9UFD9 1639 aa32.31■■■□□ 2.76
RNF170-205ENST00000526349 CEP170Q5SW79 1584 aa32.3■■■□□ 2.76
RNF170-205ENST00000526349 RUSC2Q8N2Y8 1516 aa32.23■■■□□ 2.75
RNF170-205ENST00000526349 CARMIL1Q5VZK9 1371 aa32.2■■■□□ 2.75
RNF170-205ENST00000526349 SHROOM2Q13796 1616 aa32.1■■■□□ 2.73
RNF170-205ENST00000526349 CHIC1Q5VXU3 224 aa32.08■■■□□ 2.73
RNF170-205ENST00000526349 ARAP1Q96P48 1450 aa32.05■■■□□ 2.72
RNF170-205ENST00000526349 RAPGEF2Q9Y4G8 1499 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms