Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PCDHB16Q9NRJ7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 AC135983.2-203ENST00000454486 1613 ntBASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB16Q9NRJ7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB16Q9NRJ7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHB16Q9NRJ7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB16Q9NRJ7 AP006261.1-201ENST00000584783 668 ntBASIC21.54■■□□□ 1.04
PCDHB16Q9NRJ7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB16Q9NRJ7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB16Q9NRJ7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB16Q9NRJ7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB16Q9NRJ7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
PCDHB16Q9NRJ7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDHB16Q9NRJ7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHB16Q9NRJ7 MIR3665-201ENST00000578708 105 ntBASIC21.53■■□□□ 1.04
PCDHB16Q9NRJ7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB16Q9NRJ7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB16Q9NRJ7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDHB16Q9NRJ7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB16Q9NRJ7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB16Q9NRJ7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB16Q9NRJ7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHB16Q9NRJ7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB16Q9NRJ7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB16Q9NRJ7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB16Q9NRJ7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCDHB16Q9NRJ7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB16Q9NRJ7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB16Q9NRJ7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.5■■□□□ 1.03
PCDHB16Q9NRJ7 AC018358.1-201ENST00000631079 1402 ntBASIC21.5■■□□□ 1.03
PCDHB16Q9NRJ7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB16Q9NRJ7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB16Q9NRJ7 LINC00273-201ENST00000539813 1452 ntBASIC21.5■■□□□ 1.03
PCDHB16Q9NRJ7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB16Q9NRJ7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB16Q9NRJ7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB16Q9NRJ7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB16Q9NRJ7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB16Q9NRJ7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB16Q9NRJ7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PCDHB16Q9NRJ7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHB16Q9NRJ7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHB16Q9NRJ7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB16Q9NRJ7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB16Q9NRJ7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB16Q9NRJ7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PCDHB16Q9NRJ7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PCDHB16Q9NRJ7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PCDHB16Q9NRJ7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB16Q9NRJ7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB16Q9NRJ7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB16Q9NRJ7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDHB16Q9NRJ7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB16Q9NRJ7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB16Q9NRJ7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB16Q9NRJ7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PCDHB16Q9NRJ7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDHB16Q9NRJ7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.45■■□□□ 1.03
PCDHB16Q9NRJ7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.45■■□□□ 1.03
PCDHB16Q9NRJ7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHB16Q9NRJ7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB16Q9NRJ7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PCDHB16Q9NRJ7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB16Q9NRJ7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB16Q9NRJ7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.45■■□□□ 1.02
PCDHB16Q9NRJ7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHB16Q9NRJ7 MIR6090-201ENST00000622481 60 ntBASIC21.45■■□□□ 1.02
PCDHB16Q9NRJ7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHB16Q9NRJ7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB16Q9NRJ7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB16Q9NRJ7 WHAMMP2-203ENST00000563942 1603 ntBASIC21.44■■□□□ 1.02
PCDHB16Q9NRJ7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB16Q9NRJ7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB16Q9NRJ7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB16Q9NRJ7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB16Q9NRJ7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB16Q9NRJ7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB16Q9NRJ7 DUX4L28-201ENST00000623687 678 ntBASIC21.43■■□□□ 1.02
PCDHB16Q9NRJ7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB16Q9NRJ7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB16Q9NRJ7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB16Q9NRJ7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB16Q9NRJ7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
PCDHB16Q9NRJ7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDHB16Q9NRJ7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB16Q9NRJ7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB16Q9NRJ7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB16Q9NRJ7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB16Q9NRJ7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHB16Q9NRJ7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms