Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.1■■□□□ 1.77
PCDH18Q9HCL0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDH18Q9HCL0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH18Q9HCL0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDH18Q9HCL0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
PCDH18Q9HCL0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH18Q9HCL0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH18Q9HCL0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
PCDH18Q9HCL0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH18Q9HCL0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH18Q9HCL0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH18Q9HCL0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDH18Q9HCL0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDH18Q9HCL0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L13-201ENST00000554103 1267 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L15-201ENST00000611059 1267 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L11-201ENST00000611504 1267 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L12-201ENST00000614593 1267 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L23-201ENST00000615195 1269 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L24-201ENST00000617576 1269 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L22-201ENST00000618238 1269 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L20-201ENST00000619712 1269 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L14-201ENST00000621227 1267 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L21-201ENST00000622058 1269 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L10-201ENST00000622460 1267 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 DUX4L25-201ENST00000624915 1269 ntBASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
PCDH18Q9HCL0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH18Q9HCL0 ABHD17AP4-201ENST00000411545 909 ntBASIC26.05■■□□□ 1.76
PCDH18Q9HCL0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
PCDH18Q9HCL0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDH18Q9HCL0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH18Q9HCL0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDH18Q9HCL0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH18Q9HCL0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH18Q9HCL0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.04■■□□□ 1.76
PCDH18Q9HCL0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH18Q9HCL0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDH18Q9HCL0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDH18Q9HCL0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDH18Q9HCL0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDH18Q9HCL0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDH18Q9HCL0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDH18Q9HCL0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDH18Q9HCL0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDH18Q9HCL0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
PCDH18Q9HCL0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDH18Q9HCL0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
PCDH18Q9HCL0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDH18Q9HCL0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PCDH18Q9HCL0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26■■□□□ 1.75
PCDH18Q9HCL0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
PCDH18Q9HCL0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDH18Q9HCL0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
PCDH18Q9HCL0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDH18Q9HCL0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.99■■□□□ 1.75
PCDH18Q9HCL0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDH18Q9HCL0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDH18Q9HCL0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
PCDH18Q9HCL0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH18Q9HCL0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH18Q9HCL0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH18Q9HCL0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH18Q9HCL0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH18Q9HCL0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDH18Q9HCL0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH18Q9HCL0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDH18Q9HCL0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH18Q9HCL0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDH18Q9HCL0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDH18Q9HCL0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH18Q9HCL0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
PCDH18Q9HCL0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.95■■□□□ 1.74
PCDH18Q9HCL0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDH18Q9HCL0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.94■■□□□ 1.74
PCDH18Q9HCL0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDH18Q9HCL0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDH18Q9HCL0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDH18Q9HCL0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
PCDH18Q9HCL0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDH18Q9HCL0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDH18Q9HCL0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDH18Q9HCL0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.92■■□□□ 1.74
PCDH18Q9HCL0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDH18Q9HCL0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDH18Q9HCL0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDH18Q9HCL0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDH18Q9HCL0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDH18Q9HCL0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDH18Q9HCL0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.91■■□□□ 1.74
PCDH18Q9HCL0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
PCDH18Q9HCL0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDH18Q9HCL0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDH18Q9HCL0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
PCDH18Q9HCL0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDH18Q9HCL0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PCDH18Q9HCL0 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.9■■□□□ 1.74
PCDH18Q9HCL0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.9■■□□□ 1.74
PCDH18Q9HCL0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms