Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC38A1Q9H2H9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC38A1Q9H2H9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC38A1Q9H2H9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SLC38A1Q9H2H9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SLC38A1Q9H2H9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
SLC38A1Q9H2H9 AC110285.7-201ENST00000624417 1536 ntBASIC23.3■■□□□ 1.32
SLC38A1Q9H2H9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.3■■□□□ 1.32
SLC38A1Q9H2H9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SLC38A1Q9H2H9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
SLC38A1Q9H2H9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.29■■□□□ 1.32
SLC38A1Q9H2H9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
SLC38A1Q9H2H9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLC38A1Q9H2H9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
SLC38A1Q9H2H9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SLC38A1Q9H2H9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.27■■□□□ 1.32
SLC38A1Q9H2H9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC38A1Q9H2H9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC38A1Q9H2H9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC38A1Q9H2H9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLC38A1Q9H2H9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
SLC38A1Q9H2H9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLC38A1Q9H2H9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.24■■□□□ 1.31
SLC38A1Q9H2H9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC38A1Q9H2H9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC38A1Q9H2H9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.23■■□□□ 1.31
SLC38A1Q9H2H9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLC38A1Q9H2H9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC38A1Q9H2H9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC38A1Q9H2H9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.22■■□□□ 1.31
SLC38A1Q9H2H9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SLC38A1Q9H2H9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SLC38A1Q9H2H9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SLC38A1Q9H2H9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.21■■□□□ 1.31
SLC38A1Q9H2H9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SLC38A1Q9H2H9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC38A1Q9H2H9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
SLC38A1Q9H2H9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.2■■□□□ 1.3
SLC38A1Q9H2H9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.19■■□□□ 1.3
SLC38A1Q9H2H9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SLC38A1Q9H2H9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SLC38A1Q9H2H9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.17■■□□□ 1.3
SLC38A1Q9H2H9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC38A1Q9H2H9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC38A1Q9H2H9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SLC38A1Q9H2H9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SLC38A1Q9H2H9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC38A1Q9H2H9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC38A1Q9H2H9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SLC38A1Q9H2H9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC38A1Q9H2H9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC38A1Q9H2H9 LINC01971-201ENST00000617888 1048 ntBASIC23.14■■□□□ 1.29
SLC38A1Q9H2H9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC38A1Q9H2H9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC38A1Q9H2H9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC38A1Q9H2H9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms