Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP1S3Q96PC3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.77■□□□□ 0.6
AP1S3Q96PC3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP1S3Q96PC3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP1S3Q96PC3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP1S3Q96PC3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
AP1S3Q96PC3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP1S3Q96PC3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.76■□□□□ 0.59
AP1S3Q96PC3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP1S3Q96PC3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.76■□□□□ 0.59
AP1S3Q96PC3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
AP1S3Q96PC3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP1S3Q96PC3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP1S3Q96PC3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP1S3Q96PC3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
AP1S3Q96PC3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP1S3Q96PC3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.75■□□□□ 0.59
AP1S3Q96PC3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
AP1S3Q96PC3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP1S3Q96PC3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP1S3Q96PC3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
AP1S3Q96PC3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP1S3Q96PC3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.74■□□□□ 0.59
AP1S3Q96PC3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP1S3Q96PC3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
AP1S3Q96PC3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
AP1S3Q96PC3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S3Q96PC3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S3Q96PC3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
AP1S3Q96PC3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.73■□□□□ 0.59
AP1S3Q96PC3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S3Q96PC3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S3Q96PC3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP1S3Q96PC3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S3Q96PC3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S3Q96PC3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S3Q96PC3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S3Q96PC3 BX255925.1-201ENST00000566954 1854 ntBASIC18.72■□□□□ 0.59
AP1S3Q96PC3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.72■□□□□ 0.59
AP1S3Q96PC3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S3Q96PC3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP1S3Q96PC3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.72■□□□□ 0.59
AP1S3Q96PC3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
AP1S3Q96PC3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.71■□□□□ 0.59
AP1S3Q96PC3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S3Q96PC3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
AP1S3Q96PC3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S3Q96PC3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S3Q96PC3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AP1S3Q96PC3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.71■□□□□ 0.59
AP1S3Q96PC3 AP004833.2-201ENST00000532228 1454 ntBASIC18.71■□□□□ 0.59
AP1S3Q96PC3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S3Q96PC3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S3Q96PC3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.7■□□□□ 0.58
AP1S3Q96PC3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP1S3Q96PC3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.7■□□□□ 0.58
AP1S3Q96PC3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S3Q96PC3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.69■□□□□ 0.58
AP1S3Q96PC3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S3Q96PC3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S3Q96PC3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
AP1S3Q96PC3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP1S3Q96PC3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
AP1S3Q96PC3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S3Q96PC3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S3Q96PC3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S3Q96PC3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S3Q96PC3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.68■□□□□ 0.58
AP1S3Q96PC3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.68■□□□□ 0.58
AP1S3Q96PC3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.68■□□□□ 0.58
AP1S3Q96PC3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
AP1S3Q96PC3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.68■□□□□ 0.58
AP1S3Q96PC3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP1S3Q96PC3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.67■□□□□ 0.58
AP1S3Q96PC3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S3Q96PC3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S3Q96PC3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S3Q96PC3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP1S3Q96PC3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S3Q96PC3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S3Q96PC3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S3Q96PC3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
AP1S3Q96PC3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
AP1S3Q96PC3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S3Q96PC3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S3Q96PC3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S3Q96PC3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S3Q96PC3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S3Q96PC3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S3Q96PC3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S3Q96PC3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S3Q96PC3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP1S3Q96PC3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP1S3Q96PC3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
AP1S3Q96PC3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
AP1S3Q96PC3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S3Q96PC3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S3Q96PC3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S3Q96PC3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S3Q96PC3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms