Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SMARCC1Q92922 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SMARCC1Q92922 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.85
SMARCC1Q92922 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SMARCC1Q92922 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC32.8■■■□□ 2.84
SMARCC1Q92922 AL592293.1-201ENST00000502889 1188 ntBASIC32.8■■■□□ 2.84
SMARCC1Q92922 AC133552.2-201ENST00000619106 1032 ntBASIC32.8■■■□□ 2.84
SMARCC1Q92922 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
SMARCC1Q92922 AC009831.1-201ENST00000580420 1582 ntBASIC32.79■■■□□ 2.84
SMARCC1Q92922 HES4-204ENST00000484667 667 ntTSL 3 BASIC32.79■■■□□ 2.84
SMARCC1Q92922 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.79■■■□□ 2.84
SMARCC1Q92922 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
SMARCC1Q92922 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC32.78■■■□□ 2.84
SMARCC1Q92922 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.78■■■□□ 2.84
SMARCC1Q92922 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
SMARCC1Q92922 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SMARCC1Q92922 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC32.77■■■□□ 2.84
SMARCC1Q92922 DUX4L18-201ENST00000553347 1267 ntBASIC32.77■■■□□ 2.84
SMARCC1Q92922 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.77■■■□□ 2.84
SMARCC1Q92922 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
SMARCC1Q92922 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
SMARCC1Q92922 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
SMARCC1Q92922 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SMARCC1Q92922 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SMARCC1Q92922 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
SMARCC1Q92922 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
SMARCC1Q92922 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
SMARCC1Q92922 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SMARCC1Q92922 SMPD5-203ENST00000639008 1464 ntBASIC32.72■■■□□ 2.83
SMARCC1Q92922 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
SMARCC1Q92922 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SMARCC1Q92922 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SMARCC1Q92922 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
SMARCC1Q92922 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.82
SMARCC1Q92922 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
SMARCC1Q92922 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCC1Q92922 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
SMARCC1Q92922 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC32.69■■■□□ 2.82
SMARCC1Q92922 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC32.69■■■□□ 2.82
SMARCC1Q92922 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.68■■■□□ 2.82
SMARCC1Q92922 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.68■■■□□ 2.82
SMARCC1Q92922 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC32.67■■■□□ 2.82
SMARCC1Q92922 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
SMARCC1Q92922 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
SMARCC1Q92922 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
SMARCC1Q92922 AL035685.1-201ENST00000636663 812 ntBASIC32.67■■■□□ 2.82
SMARCC1Q92922 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
SMARCC1Q92922 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SMARCC1Q92922 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.66■■■□□ 2.82
SMARCC1Q92922 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCC1Q92922 AC026202.3-201ENST00000600805 1127 ntBASIC32.65■■■□□ 2.82
SMARCC1Q92922 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC32.65■■■□□ 2.82
SMARCC1Q92922 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC32.65■■■□□ 2.82
SMARCC1Q92922 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
SMARCC1Q92922 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
SMARCC1Q92922 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.64■■■□□ 2.82
SMARCC1Q92922 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
SMARCC1Q92922 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.64■■■□□ 2.82
SMARCC1Q92922 AP004833.2-201ENST00000532228 1454 ntBASIC32.64■■■□□ 2.82
SMARCC1Q92922 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
SMARCC1Q92922 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SMARCC1Q92922 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SMARCC1Q92922 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
SMARCC1Q92922 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.63■■■□□ 2.81
SMARCC1Q92922 AL359258.2-201ENST00000564063 1566 ntBASIC32.62■■■□□ 2.81
SMARCC1Q92922 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SMARCC1Q92922 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SMARCC1Q92922 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
SMARCC1Q92922 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC32.62■■■□□ 2.81
SMARCC1Q92922 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC32.62■■■□□ 2.81
SMARCC1Q92922 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC32.62■■■□□ 2.81
SMARCC1Q92922 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SMARCC1Q92922 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.61■■■□□ 2.81
SMARCC1Q92922 AL451085.2-201ENST00000605085 799 ntBASIC32.61■■■□□ 2.81
SMARCC1Q92922 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
SMARCC1Q92922 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
SMARCC1Q92922 AC025884.2-201ENST00000553429 711 ntBASIC32.59■■■□□ 2.81
SMARCC1Q92922 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.58■■■□□ 2.81
SMARCC1Q92922 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
SMARCC1Q92922 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
SMARCC1Q92922 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
SMARCC1Q92922 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SMARCC1Q92922 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.56■■■□□ 2.8
SMARCC1Q92922 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
SMARCC1Q92922 TRIR-205ENST00000592273 783 ntTSL 3 BASIC32.56■■■□□ 2.8
SMARCC1Q92922 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
SMARCC1Q92922 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
SMARCC1Q92922 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC32.55■■■□□ 2.8
SMARCC1Q92922 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC32.55■■■□□ 2.8
SMARCC1Q92922 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
SMARCC1Q92922 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC32.54■■■□□ 2.8
SMARCC1Q92922 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.54■■■□□ 2.8
SMARCC1Q92922 DUX4L9-201ENST00000449051 1259 ntBASIC32.54■■■□□ 2.8
SMARCC1Q92922 RP9P-202ENST00000450133 1212 ntBASIC32.54■■■□□ 2.8
SMARCC1Q92922 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC32.54■■■□□ 2.8
SMARCC1Q92922 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
SMARCC1Q92922 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SMARCC1Q92922 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SMARCC1Q92922 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
SMARCC1Q92922 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms