Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3L1Q8WWY6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3L1Q8WWY6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MBD3L1Q8WWY6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.75■□□□□ 0.75
MBD3L1Q8WWY6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
MBD3L1Q8WWY6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3L1Q8WWY6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.74■□□□□ 0.75
MBD3L1Q8WWY6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MBD3L1Q8WWY6 AC092803.2-201ENST00000564287 1899 ntBASIC19.73■□□□□ 0.75
MBD3L1Q8WWY6 AC127502.1-201ENST00000399971 1502 ntBASIC19.73■□□□□ 0.75
MBD3L1Q8WWY6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MBD3L1Q8WWY6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MBD3L1Q8WWY6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3L1Q8WWY6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MBD3L1Q8WWY6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
MBD3L1Q8WWY6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.71■□□□□ 0.75
MBD3L1Q8WWY6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3L1Q8WWY6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3L1Q8WWY6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MBD3L1Q8WWY6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L1Q8WWY6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L1Q8WWY6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.7■□□□□ 0.74
MBD3L1Q8WWY6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L1Q8WWY6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L1Q8WWY6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L1Q8WWY6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L1Q8WWY6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MBD3L1Q8WWY6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L1Q8WWY6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L1Q8WWY6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MBD3L1Q8WWY6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3L1Q8WWY6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
MBD3L1Q8WWY6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3L1Q8WWY6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.68■□□□□ 0.74
MBD3L1Q8WWY6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3L1Q8WWY6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3L1Q8WWY6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.67■□□□□ 0.74
MBD3L1Q8WWY6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.67■□□□□ 0.74
MBD3L1Q8WWY6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MBD3L1Q8WWY6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L1Q8WWY6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L1Q8WWY6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L1Q8WWY6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L1Q8WWY6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L1Q8WWY6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MBD3L1Q8WWY6 AC018358.1-201ENST00000631079 1402 ntBASIC19.66■□□□□ 0.74
MBD3L1Q8WWY6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.65■□□□□ 0.74
MBD3L1Q8WWY6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.65■□□□□ 0.74
MBD3L1Q8WWY6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3L1Q8WWY6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3L1Q8WWY6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3L1Q8WWY6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MBD3L1Q8WWY6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3L1Q8WWY6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MBD3L1Q8WWY6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
MBD3L1Q8WWY6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
MBD3L1Q8WWY6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
MBD3L1Q8WWY6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.64■□□□□ 0.74
MBD3L1Q8WWY6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.64■□□□□ 0.74
MBD3L1Q8WWY6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3L1Q8WWY6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3L1Q8WWY6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MBD3L1Q8WWY6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MBD3L1Q8WWY6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3L1Q8WWY6 ZNRF2P1-201ENST00000441407 443 ntBASIC19.63■□□□□ 0.73
MBD3L1Q8WWY6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3L1Q8WWY6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3L1Q8WWY6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3L1Q8WWY6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MBD3L1Q8WWY6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3L1Q8WWY6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.62■□□□□ 0.73
MBD3L1Q8WWY6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3L1Q8WWY6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD3L1Q8WWY6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD3L1Q8WWY6 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3L1Q8WWY6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3L1Q8WWY6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD3L1Q8WWY6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
MBD3L1Q8WWY6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3L1Q8WWY6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3L1Q8WWY6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3L1Q8WWY6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MBD3L1Q8WWY6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3L1Q8WWY6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3L1Q8WWY6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3L1Q8WWY6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3L1Q8WWY6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.59■□□□□ 0.73
MBD3L1Q8WWY6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
MBD3L1Q8WWY6 ERN1-208ENST00000606895 2068 ntBASIC19.58■□□□□ 0.73
MBD3L1Q8WWY6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3L1Q8WWY6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3L1Q8WWY6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3L1Q8WWY6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MBD3L1Q8WWY6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L1Q8WWY6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L1Q8WWY6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L1Q8WWY6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.56■□□□□ 0.72
MBD3L1Q8WWY6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3L1Q8WWY6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3L1Q8WWY6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms