Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.6■■□□□ 1.85
SMRP1Q8NCR6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.6■■□□□ 1.85
SMRP1Q8NCR6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SMRP1Q8NCR6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SMRP1Q8NCR6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SMRP1Q8NCR6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMRP1Q8NCR6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
SMRP1Q8NCR6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SMRP1Q8NCR6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SMRP1Q8NCR6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
SMRP1Q8NCR6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SMRP1Q8NCR6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMRP1Q8NCR6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMRP1Q8NCR6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMRP1Q8NCR6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.56■■□□□ 1.84
SMRP1Q8NCR6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SMRP1Q8NCR6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SMRP1Q8NCR6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
SMRP1Q8NCR6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.55■■□□□ 1.84
SMRP1Q8NCR6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
SMRP1Q8NCR6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
SMRP1Q8NCR6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SMRP1Q8NCR6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SMRP1Q8NCR6 AC019069.1-201ENST00000610008 1333 ntBASIC26.54■■□□□ 1.84
SMRP1Q8NCR6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMRP1Q8NCR6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.53■■□□□ 1.84
SMRP1Q8NCR6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SMRP1Q8NCR6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMRP1Q8NCR6 AL135925.1-201ENST00000605920 1701 ntBASIC26.53■■□□□ 1.84
SMRP1Q8NCR6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMRP1Q8NCR6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.52■■□□□ 1.84
SMRP1Q8NCR6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SMRP1Q8NCR6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
SMRP1Q8NCR6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
SMRP1Q8NCR6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SMRP1Q8NCR6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.51■■□□□ 1.83
SMRP1Q8NCR6 SMPD5-203ENST00000639008 1464 ntBASIC26.51■■□□□ 1.83
SMRP1Q8NCR6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.51■■□□□ 1.83
SMRP1Q8NCR6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
SMRP1Q8NCR6 AC026202.3-201ENST00000600805 1127 ntBASIC26.51■■□□□ 1.83
SMRP1Q8NCR6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
SMRP1Q8NCR6 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SMRP1Q8NCR6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SMRP1Q8NCR6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
SMRP1Q8NCR6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
SMRP1Q8NCR6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.5■■□□□ 1.83
SMRP1Q8NCR6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SMRP1Q8NCR6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.49■■□□□ 1.83
SMRP1Q8NCR6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.49■■□□□ 1.83
SMRP1Q8NCR6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMRP1Q8NCR6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMRP1Q8NCR6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SMRP1Q8NCR6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.48■■□□□ 1.83
SMRP1Q8NCR6 DUX4L9-201ENST00000449051 1259 ntBASIC26.48■■□□□ 1.83
SMRP1Q8NCR6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SMRP1Q8NCR6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SMRP1Q8NCR6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.48■■□□□ 1.83
SMRP1Q8NCR6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SMRP1Q8NCR6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMRP1Q8NCR6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SMRP1Q8NCR6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.47■■□□□ 1.83
SMRP1Q8NCR6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMRP1Q8NCR6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SMRP1Q8NCR6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
SMRP1Q8NCR6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SMRP1Q8NCR6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SMRP1Q8NCR6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.46■■□□□ 1.83
SMRP1Q8NCR6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SMRP1Q8NCR6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.46■■□□□ 1.83
SMRP1Q8NCR6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SMRP1Q8NCR6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SMRP1Q8NCR6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMRP1Q8NCR6 AC009299.2-201ENST00000482477 511 ntBASIC26.44■■□□□ 1.82
SMRP1Q8NCR6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.44■■□□□ 1.82
SMRP1Q8NCR6 AC010980.1-201ENST00000587192 1142 ntBASIC26.44■■□□□ 1.82
SMRP1Q8NCR6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
SMRP1Q8NCR6 AC074183.2-201ENST00000623112 922 ntBASIC26.44■■□□□ 1.82
SMRP1Q8NCR6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMRP1Q8NCR6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMRP1Q8NCR6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.43■■□□□ 1.82
SMRP1Q8NCR6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.43■■□□□ 1.82
SMRP1Q8NCR6 BHLHE23-202ENST00000612929 1109 ntBASIC26.43■■□□□ 1.82
SMRP1Q8NCR6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.42■■□□□ 1.82
SMRP1Q8NCR6 RP9P-202ENST00000450133 1212 ntBASIC26.41■■□□□ 1.82
SMRP1Q8NCR6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMRP1Q8NCR6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
SMRP1Q8NCR6 KRT8P33-201ENST00000508125 1423 ntBASIC26.4■■□□□ 1.82
SMRP1Q8NCR6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMRP1Q8NCR6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.4■■□□□ 1.82
SMRP1Q8NCR6 AC025884.2-201ENST00000553429 711 ntBASIC26.4■■□□□ 1.82
SMRP1Q8NCR6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.39■■□□□ 1.82
SMRP1Q8NCR6 AL359258.2-201ENST00000564063 1566 ntBASIC26.39■■□□□ 1.82
SMRP1Q8NCR6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.39■■□□□ 1.81
SMRP1Q8NCR6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMRP1Q8NCR6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.38■■□□□ 1.81
SMRP1Q8NCR6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMRP1Q8NCR6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMRP1Q8NCR6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMRP1Q8NCR6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMRP1Q8NCR6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 1730.6 ms