Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
PROM2Q8N271 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
PROM2Q8N271 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
PROM2Q8N271 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.97■■■□□ 2.87
PROM2Q8N271 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.96■■■□□ 2.87
PROM2Q8N271 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC32.96■■■□□ 2.87
PROM2Q8N271 AC010980.1-201ENST00000587192 1142 ntBASIC32.96■■■□□ 2.87
PROM2Q8N271 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.95■■■□□ 2.87
PROM2Q8N271 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.95■■■□□ 2.87
PROM2Q8N271 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.87
PROM2Q8N271 AC126177.7-201ENST00000547904 679 ntBASIC32.95■■■□□ 2.87
PROM2Q8N271 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.86
PROM2Q8N271 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
PROM2Q8N271 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
PROM2Q8N271 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
PROM2Q8N271 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
PROM2Q8N271 AC026202.3-201ENST00000600805 1127 ntBASIC32.93■■■□□ 2.86
PROM2Q8N271 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PROM2Q8N271 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PROM2Q8N271 HES6-204ENST00000409182 863 ntTSL 2 BASIC32.92■■■□□ 2.86
PROM2Q8N271 RP9P-202ENST00000450133 1212 ntBASIC32.92■■■□□ 2.86
PROM2Q8N271 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PROM2Q8N271 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PROM2Q8N271 KRT8P33-201ENST00000508125 1423 ntBASIC32.92■■■□□ 2.86
PROM2Q8N271 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
PROM2Q8N271 AC103834.1-201ENST00000520383 144 ntBASIC32.91■■■□□ 2.86
PROM2Q8N271 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
PROM2Q8N271 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.91■■■□□ 2.86
PROM2Q8N271 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
PROM2Q8N271 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
PROM2Q8N271 DUX4L9-201ENST00000449051 1259 ntBASIC32.9■■■□□ 2.86
PROM2Q8N271 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC32.9■■■□□ 2.86
PROM2Q8N271 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
PROM2Q8N271 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
PROM2Q8N271 GUSBP5-201ENST00000418136 578 ntBASIC32.89■■■□□ 2.86
PROM2Q8N271 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
PROM2Q8N271 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
PROM2Q8N271 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
PROM2Q8N271 MIR935-201ENST00000401179 91 ntBASIC32.87■■■□□ 2.85
PROM2Q8N271 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
PROM2Q8N271 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
PROM2Q8N271 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
PROM2Q8N271 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.86■■■□□ 2.85
PROM2Q8N271 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
PROM2Q8N271 OR2A1-AS1-204ENST00000470435 602 ntBASIC32.85■■■□□ 2.85
PROM2Q8N271 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC32.85■■■□□ 2.85
PROM2Q8N271 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC32.84■■■□□ 2.85
PROM2Q8N271 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
PROM2Q8N271 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC32.84■■■□□ 2.85
PROM2Q8N271 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
PROM2Q8N271 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC32.83■■■□□ 2.85
PROM2Q8N271 SMPD5-203ENST00000639008 1464 ntBASIC32.83■■■□□ 2.85
PROM2Q8N271 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
PROM2Q8N271 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
PROM2Q8N271 SPCS2P3-201ENST00000500401 656 ntBASIC32.83■■■□□ 2.85
PROM2Q8N271 BHLHE23-202ENST00000612929 1109 ntBASIC32.82■■■□□ 2.84
PROM2Q8N271 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.82■■■□□ 2.84
PROM2Q8N271 BEX3-202ENST00000372634 753 ntTSL 2 BASIC32.8■■■□□ 2.84
PROM2Q8N271 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.8■■■□□ 2.84
PROM2Q8N271 PVT1_1.1-201ENST00000615125 194 ntBASIC32.8■■■□□ 2.84
PROM2Q8N271 AC074183.2-201ENST00000623112 922 ntBASIC32.8■■■□□ 2.84
PROM2Q8N271 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
PROM2Q8N271 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
PROM2Q8N271 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
PROM2Q8N271 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC32.79■■■□□ 2.84
PROM2Q8N271 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
PROM2Q8N271 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
PROM2Q8N271 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
PROM2Q8N271 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC32.78■■■□□ 2.84
PROM2Q8N271 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
PROM2Q8N271 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC32.77■■■□□ 2.84
PROM2Q8N271 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
PROM2Q8N271 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
PROM2Q8N271 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC32.76■■■□□ 2.83
PROM2Q8N271 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC32.76■■■□□ 2.83
PROM2Q8N271 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC32.75■■■□□ 2.83
PROM2Q8N271 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC32.74■■■□□ 2.83
PROM2Q8N271 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
PROM2Q8N271 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
PROM2Q8N271 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC32.74■■■□□ 2.83
PROM2Q8N271 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.74■■■□□ 2.83
PROM2Q8N271 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
PROM2Q8N271 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
PROM2Q8N271 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
PROM2Q8N271 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC32.73■■■□□ 2.83
PROM2Q8N271 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
PROM2Q8N271 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.71■■■□□ 2.83
PROM2Q8N271 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
PROM2Q8N271 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC32.71■■■□□ 2.83
PROM2Q8N271 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC32.71■■■□□ 2.83
PROM2Q8N271 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
PROM2Q8N271 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32.7■■■□□ 2.83
PROM2Q8N271 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.83
PROM2Q8N271 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC32.7■■■□□ 2.83
PROM2Q8N271 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
PROM2Q8N271 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC32.7■■■□□ 2.83
PROM2Q8N271 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC32.69■■■□□ 2.82
PROM2Q8N271 RAP2CP1-202ENST00000605179 643 ntBASIC32.69■■■□□ 2.82
PROM2Q8N271 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC32.69■■■□□ 2.82
PROM2Q8N271 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms