Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.55■■■□□ 2
ZC3H3Q8IXZ2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.55■■■□□ 2
ZC3H3Q8IXZ2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.55■■■□□ 2
ZC3H3Q8IXZ2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.55■■■□□ 2
ZC3H3Q8IXZ2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
ZC3H3Q8IXZ2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
ZC3H3Q8IXZ2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.55■■■□□ 2
ZC3H3Q8IXZ2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
ZC3H3Q8IXZ2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.54■■■□□ 2
ZC3H3Q8IXZ2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
ZC3H3Q8IXZ2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.54■■■□□ 2
ZC3H3Q8IXZ2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.53■■■□□ 2
ZC3H3Q8IXZ2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.53■■■□□ 2
ZC3H3Q8IXZ2 LINC01971-201ENST00000617888 1048 ntBASIC27.53■■■□□ 2
ZC3H3Q8IXZ2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ZC3H3Q8IXZ2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ZC3H3Q8IXZ2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
ZC3H3Q8IXZ2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.52■■■□□ 2
ZC3H3Q8IXZ2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.52■■■□□ 2
ZC3H3Q8IXZ2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
ZC3H3Q8IXZ2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
ZC3H3Q8IXZ2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
ZC3H3Q8IXZ2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
ZC3H3Q8IXZ2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.51■■□□□ 1.99
ZC3H3Q8IXZ2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.51■■□□□ 1.99
ZC3H3Q8IXZ2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
ZC3H3Q8IXZ2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.5■■□□□ 1.99
ZC3H3Q8IXZ2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.5■■□□□ 1.99
ZC3H3Q8IXZ2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
ZC3H3Q8IXZ2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.5■■□□□ 1.99
ZC3H3Q8IXZ2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
ZC3H3Q8IXZ2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
ZC3H3Q8IXZ2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.49■■□□□ 1.99
ZC3H3Q8IXZ2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ZC3H3Q8IXZ2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.49■■□□□ 1.99
ZC3H3Q8IXZ2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
ZC3H3Q8IXZ2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
ZC3H3Q8IXZ2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ZC3H3Q8IXZ2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
ZC3H3Q8IXZ2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.49■■□□□ 1.99
ZC3H3Q8IXZ2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
ZC3H3Q8IXZ2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
ZC3H3Q8IXZ2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.47■■□□□ 1.99
ZC3H3Q8IXZ2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
ZC3H3Q8IXZ2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.46■■□□□ 1.99
ZC3H3Q8IXZ2 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.46■■□□□ 1.99
ZC3H3Q8IXZ2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
ZC3H3Q8IXZ2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
ZC3H3Q8IXZ2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.44■■□□□ 1.98
ZC3H3Q8IXZ2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.44■■□□□ 1.98
ZC3H3Q8IXZ2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ZC3H3Q8IXZ2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.44■■□□□ 1.98
ZC3H3Q8IXZ2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ZC3H3Q8IXZ2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.44■■□□□ 1.98
ZC3H3Q8IXZ2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.43■■□□□ 1.98
ZC3H3Q8IXZ2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
ZC3H3Q8IXZ2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
ZC3H3Q8IXZ2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.43■■□□□ 1.98
ZC3H3Q8IXZ2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
ZC3H3Q8IXZ2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.43■■□□□ 1.98
ZC3H3Q8IXZ2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
ZC3H3Q8IXZ2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 DUX4L13-201ENST00000554103 1267 ntBASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 DUX4L15-201ENST00000611059 1267 ntBASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 DUX4L23-201ENST00000615195 1269 ntBASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 DUX4L24-201ENST00000617576 1269 ntBASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 DUX4L22-201ENST00000618238 1269 ntBASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 DUX4L20-201ENST00000619712 1269 ntBASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 DUX4L21-201ENST00000622058 1269 ntBASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 DUX4L10-201ENST00000622460 1267 ntBASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 DUX4L25-201ENST00000624915 1269 ntBASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.42■■□□□ 1.98
ZC3H3Q8IXZ2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.41■■□□□ 1.98
ZC3H3Q8IXZ2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ZC3H3Q8IXZ2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.4■■□□□ 1.98
ZC3H3Q8IXZ2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.4■■□□□ 1.98
ZC3H3Q8IXZ2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ZC3H3Q8IXZ2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
ZC3H3Q8IXZ2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.38■■□□□ 1.97
ZC3H3Q8IXZ2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZC3H3Q8IXZ2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ZC3H3Q8IXZ2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.37■■□□□ 1.97
ZC3H3Q8IXZ2 DUX4L11-201ENST00000611504 1267 ntBASIC27.37■■□□□ 1.97
ZC3H3Q8IXZ2 DUX4L12-201ENST00000614593 1267 ntBASIC27.37■■□□□ 1.97
ZC3H3Q8IXZ2 DUX4L14-201ENST00000621227 1267 ntBASIC27.37■■□□□ 1.97
ZC3H3Q8IXZ2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZC3H3Q8IXZ2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ZC3H3Q8IXZ2 ZNRF2P2-203ENST00000454624 420 ntBASIC27.36■■□□□ 1.97
ZC3H3Q8IXZ2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
ZC3H3Q8IXZ2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ZC3H3Q8IXZ2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
ZC3H3Q8IXZ2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ZC3H3Q8IXZ2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
ZC3H3Q8IXZ2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ZC3H3Q8IXZ2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ZC3H3Q8IXZ2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.34■■□□□ 1.97
ZC3H3Q8IXZ2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.34■■□□□ 1.97
ZC3H3Q8IXZ2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms