Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
VRK2Q86Y07 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.26■■□□□ 1.31
VRK2Q86Y07 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VRK2Q86Y07 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
VRK2Q86Y07 RPS2P35-201ENST00000443417 897 ntBASIC23.26■■□□□ 1.31
VRK2Q86Y07 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.26■■□□□ 1.31
VRK2Q86Y07 DUX4L29-201ENST00000425409 679 ntBASIC23.25■■□□□ 1.31
VRK2Q86Y07 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
VRK2Q86Y07 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.24■■□□□ 1.31
VRK2Q86Y07 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
VRK2Q86Y07 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VRK2Q86Y07 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
VRK2Q86Y07 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.24■■□□□ 1.31
VRK2Q86Y07 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
VRK2Q86Y07 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
VRK2Q86Y07 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VRK2Q86Y07 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
VRK2Q86Y07 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.23■■□□□ 1.31
VRK2Q86Y07 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VRK2Q86Y07 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.22■■□□□ 1.31
VRK2Q86Y07 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VRK2Q86Y07 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
VRK2Q86Y07 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
VRK2Q86Y07 AC110285.7-201ENST00000624417 1536 ntBASIC23.21■■□□□ 1.31
VRK2Q86Y07 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
VRK2Q86Y07 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VRK2Q86Y07 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VRK2Q86Y07 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
VRK2Q86Y07 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VRK2Q86Y07 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
VRK2Q86Y07 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
VRK2Q86Y07 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
VRK2Q86Y07 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
VRK2Q86Y07 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VRK2Q86Y07 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.18■■□□□ 1.3
VRK2Q86Y07 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
VRK2Q86Y07 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.17■■□□□ 1.3
VRK2Q86Y07 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
VRK2Q86Y07 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
VRK2Q86Y07 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.16■■□□□ 1.3
VRK2Q86Y07 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.16■■□□□ 1.3
VRK2Q86Y07 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
VRK2Q86Y07 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
VRK2Q86Y07 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VRK2Q86Y07 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VRK2Q86Y07 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
VRK2Q86Y07 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.15■■□□□ 1.3
VRK2Q86Y07 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.15■■□□□ 1.3
VRK2Q86Y07 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
VRK2Q86Y07 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.15■■□□□ 1.3
VRK2Q86Y07 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VRK2Q86Y07 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VRK2Q86Y07 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
VRK2Q86Y07 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.14■■□□□ 1.29
VRK2Q86Y07 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
VRK2Q86Y07 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
VRK2Q86Y07 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
VRK2Q86Y07 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VRK2Q86Y07 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.13■■□□□ 1.29
VRK2Q86Y07 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.13■■□□□ 1.29
VRK2Q86Y07 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
VRK2Q86Y07 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VRK2Q86Y07 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VRK2Q86Y07 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.12■■□□□ 1.29
VRK2Q86Y07 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VRK2Q86Y07 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
VRK2Q86Y07 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.11■■□□□ 1.29
VRK2Q86Y07 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.1■■□□□ 1.29
VRK2Q86Y07 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VRK2Q86Y07 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VRK2Q86Y07 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.1■■□□□ 1.29
VRK2Q86Y07 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
VRK2Q86Y07 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VRK2Q86Y07 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VRK2Q86Y07 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.09■■□□□ 1.29
VRK2Q86Y07 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.09■■□□□ 1.29
VRK2Q86Y07 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.09■■□□□ 1.29
VRK2Q86Y07 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VRK2Q86Y07 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
VRK2Q86Y07 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VRK2Q86Y07 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
VRK2Q86Y07 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
VRK2Q86Y07 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
VRK2Q86Y07 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VRK2Q86Y07 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
VRK2Q86Y07 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.08■■□□□ 1.29
VRK2Q86Y07 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.08■■□□□ 1.29
VRK2Q86Y07 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
VRK2Q86Y07 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
VRK2Q86Y07 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.08■■□□□ 1.29
VRK2Q86Y07 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
VRK2Q86Y07 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
VRK2Q86Y07 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
VRK2Q86Y07 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.07■■□□□ 1.28
VRK2Q86Y07 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VRK2Q86Y07 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VRK2Q86Y07 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.06■■□□□ 1.28
VRK2Q86Y07 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.06■■□□□ 1.28
VRK2Q86Y07 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
VRK2Q86Y07 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms