Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HIST2H3AQ71DI3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.04■■□□□ 1.12
HIST2H3AQ71DI3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.04■■□□□ 1.12
HIST2H3AQ71DI3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HIST2H3AQ71DI3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HIST2H3AQ71DI3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HIST2H3AQ71DI3 LINC01971-201ENST00000617888 1048 ntBASIC22.03■■□□□ 1.12
HIST2H3AQ71DI3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HIST2H3AQ71DI3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HIST2H3AQ71DI3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HIST2H3AQ71DI3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HIST2H3AQ71DI3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.02■■□□□ 1.12
HIST2H3AQ71DI3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.01■■□□□ 1.11
HIST2H3AQ71DI3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
HIST2H3AQ71DI3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22■■□□□ 1.11
HIST2H3AQ71DI3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22■■□□□ 1.11
HIST2H3AQ71DI3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HIST2H3AQ71DI3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HIST2H3AQ71DI3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIST2H3AQ71DI3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HIST2H3AQ71DI3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIST2H3AQ71DI3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.99■■□□□ 1.11
HIST2H3AQ71DI3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HIST2H3AQ71DI3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HIST2H3AQ71DI3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIST2H3AQ71DI3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HIST2H3AQ71DI3 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.98■■□□□ 1.11
HIST2H3AQ71DI3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIST2H3AQ71DI3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HIST2H3AQ71DI3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST2H3AQ71DI3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HIST2H3AQ71DI3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.96■■□□□ 1.11
HIST2H3AQ71DI3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HIST2H3AQ71DI3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST2H3AQ71DI3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HIST2H3AQ71DI3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
HIST2H3AQ71DI3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L13-201ENST00000554103 1267 ntBASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L15-201ENST00000611059 1267 ntBASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L23-201ENST00000615195 1269 ntBASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L24-201ENST00000617576 1269 ntBASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L22-201ENST00000618238 1269 ntBASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L20-201ENST00000619712 1269 ntBASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L21-201ENST00000622058 1269 ntBASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L10-201ENST00000622460 1267 ntBASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L25-201ENST00000624915 1269 ntBASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HIST2H3AQ71DI3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.94■■□□□ 1.1
HIST2H3AQ71DI3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.94■■□□□ 1.1
HIST2H3AQ71DI3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST2H3AQ71DI3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST2H3AQ71DI3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST2H3AQ71DI3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HIST2H3AQ71DI3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.94■■□□□ 1.1
HIST2H3AQ71DI3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HIST2H3AQ71DI3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
HIST2H3AQ71DI3 ZNRF2P2-203ENST00000454624 420 ntBASIC21.93■■□□□ 1.1
HIST2H3AQ71DI3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.92■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L11-201ENST00000611504 1267 ntBASIC21.92■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L12-201ENST00000614593 1267 ntBASIC21.92■■□□□ 1.1
HIST2H3AQ71DI3 DUX4L14-201ENST00000621227 1267 ntBASIC21.92■■□□□ 1.1
HIST2H3AQ71DI3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
HIST2H3AQ71DI3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HIST2H3AQ71DI3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST2H3AQ71DI3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
HIST2H3AQ71DI3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST2H3AQ71DI3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HIST2H3AQ71DI3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST2H3AQ71DI3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST2H3AQ71DI3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HIST2H3AQ71DI3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HIST2H3AQ71DI3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST2H3AQ71DI3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.9■■□□□ 1.1
HIST2H3AQ71DI3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HIST2H3AQ71DI3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
HIST2H3AQ71DI3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.89■■□□□ 1.1
HIST2H3AQ71DI3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
HIST2H3AQ71DI3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
HIST2H3AQ71DI3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.88■■□□□ 1.09
HIST2H3AQ71DI3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.88■■□□□ 1.09
HIST2H3AQ71DI3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
HIST2H3AQ71DI3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HIST2H3AQ71DI3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
HIST2H3AQ71DI3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms