Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC32.44■■■□□ 2.78
RC3H1Q5TC82 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
RC3H1Q5TC82 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC32.43■■■□□ 2.78
RC3H1Q5TC82 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.43■■■□□ 2.78
RC3H1Q5TC82 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.42■■■□□ 2.78
RC3H1Q5TC82 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
RC3H1Q5TC82 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.42■■■□□ 2.78
RC3H1Q5TC82 AC009831.1-201ENST00000580420 1582 ntBASIC32.42■■■□□ 2.78
RC3H1Q5TC82 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC32.42■■■□□ 2.78
RC3H1Q5TC82 AL592293.1-201ENST00000502889 1188 ntBASIC32.42■■■□□ 2.78
RC3H1Q5TC82 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC32.42■■■□□ 2.78
RC3H1Q5TC82 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC32.42■■■□□ 2.78
RC3H1Q5TC82 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
RC3H1Q5TC82 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.41■■■□□ 2.78
RC3H1Q5TC82 HES4-204ENST00000484667 667 ntTSL 3 BASIC32.4■■■□□ 2.78
RC3H1Q5TC82 AC133552.2-201ENST00000619106 1032 ntBASIC32.4■■■□□ 2.78
RC3H1Q5TC82 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
RC3H1Q5TC82 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RC3H1Q5TC82 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
RC3H1Q5TC82 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
RC3H1Q5TC82 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
RC3H1Q5TC82 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
RC3H1Q5TC82 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RC3H1Q5TC82 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
RC3H1Q5TC82 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RC3H1Q5TC82 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
RC3H1Q5TC82 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
RC3H1Q5TC82 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC32.36■■■□□ 2.77
RC3H1Q5TC82 DUX4L18-201ENST00000553347 1267 ntBASIC32.36■■■□□ 2.77
RC3H1Q5TC82 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
RC3H1Q5TC82 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.34■■■□□ 2.77
RC3H1Q5TC82 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
RC3H1Q5TC82 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
RC3H1Q5TC82 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.34■■■□□ 2.77
RC3H1Q5TC82 SMPD5-203ENST00000639008 1464 ntBASIC32.34■■■□□ 2.77
RC3H1Q5TC82 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
RC3H1Q5TC82 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.33■■■□□ 2.77
RC3H1Q5TC82 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RC3H1Q5TC82 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
RC3H1Q5TC82 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RC3H1Q5TC82 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.31■■■□□ 2.76
RC3H1Q5TC82 AP004833.2-201ENST00000532228 1454 ntBASIC32.3■■■□□ 2.76
RC3H1Q5TC82 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
RC3H1Q5TC82 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
RC3H1Q5TC82 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
RC3H1Q5TC82 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC32.3■■■□□ 2.76
RC3H1Q5TC82 AC026202.3-201ENST00000600805 1127 ntBASIC32.3■■■□□ 2.76
RC3H1Q5TC82 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RC3H1Q5TC82 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
RC3H1Q5TC82 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.29■■■□□ 2.76
RC3H1Q5TC82 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC32.29■■■□□ 2.76
RC3H1Q5TC82 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC32.29■■■□□ 2.76
RC3H1Q5TC82 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
RC3H1Q5TC82 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
RC3H1Q5TC82 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RC3H1Q5TC82 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
RC3H1Q5TC82 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RC3H1Q5TC82 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
RC3H1Q5TC82 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
RC3H1Q5TC82 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
RC3H1Q5TC82 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RC3H1Q5TC82 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
RC3H1Q5TC82 AL035685.1-201ENST00000636663 812 ntBASIC32.26■■■□□ 2.75
RC3H1Q5TC82 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RC3H1Q5TC82 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC32.26■■■□□ 2.75
RC3H1Q5TC82 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
RC3H1Q5TC82 AC025884.2-201ENST00000553429 711 ntBASIC32.25■■■□□ 2.75
RC3H1Q5TC82 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC32.25■■■□□ 2.75
RC3H1Q5TC82 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
RC3H1Q5TC82 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC32.24■■■□□ 2.75
RC3H1Q5TC82 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.24■■■□□ 2.75
RC3H1Q5TC82 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.23■■■□□ 2.75
RC3H1Q5TC82 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RC3H1Q5TC82 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RC3H1Q5TC82 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
RC3H1Q5TC82 AL359258.2-201ENST00000564063 1566 ntBASIC32.23■■■□□ 2.75
RC3H1Q5TC82 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RC3H1Q5TC82 AL451085.2-201ENST00000605085 799 ntBASIC32.22■■■□□ 2.75
RC3H1Q5TC82 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
RC3H1Q5TC82 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
RC3H1Q5TC82 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC32.21■■■□□ 2.75
RC3H1Q5TC82 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
RC3H1Q5TC82 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RC3H1Q5TC82 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
RC3H1Q5TC82 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RC3H1Q5TC82 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
RC3H1Q5TC82 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC32.19■■■□□ 2.74
RC3H1Q5TC82 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
RC3H1Q5TC82 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC32.18■■■□□ 2.74
RC3H1Q5TC82 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC32.18■■■□□ 2.74
RC3H1Q5TC82 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC32.18■■■□□ 2.74
RC3H1Q5TC82 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
RC3H1Q5TC82 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
RC3H1Q5TC82 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC32.17■■■□□ 2.74
RC3H1Q5TC82 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.17■■■□□ 2.74
RC3H1Q5TC82 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
RC3H1Q5TC82 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RC3H1Q5TC82 DUX4L9-201ENST00000449051 1259 ntBASIC32.16■■■□□ 2.74
RC3H1Q5TC82 RP9P-202ENST00000450133 1212 ntBASIC32.16■■■□□ 2.74
RC3H1Q5TC82 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms