Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPL39P62891 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPL39P62891 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPL39P62891 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPL39P62891 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPL39P62891 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPL39P62891 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.69■□□□□ 0.42
RPL39P62891 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPL39P62891 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPL39P62891 AC145676.1-201ENST00000514988 2004 ntBASIC17.69■□□□□ 0.42
RPL39P62891 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RPL39P62891 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPL39P62891 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPL39P62891 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.67■□□□□ 0.42
RPL39P62891 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RPL39P62891 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPL39P62891 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPL39P62891 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RPL39P62891 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPL39P62891 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RPL39P62891 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RPL39P62891 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.65■□□□□ 0.42
RPL39P62891 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPL39P62891 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPL39P62891 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.65■□□□□ 0.42
RPL39P62891 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPL39P62891 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPL39P62891 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPL39P62891 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.65■□□□□ 0.42
RPL39P62891 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.65■□□□□ 0.42
RPL39P62891 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPL39P62891 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.65■□□□□ 0.42
RPL39P62891 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPL39P62891 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
RPL39P62891 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPL39P62891 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPL39P62891 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.64■□□□□ 0.41
RPL39P62891 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.64■□□□□ 0.41
RPL39P62891 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPL39P62891 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RPL39P62891 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPL39P62891 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPL39P62891 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPL39P62891 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPL39P62891 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RPL39P62891 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.62■□□□□ 0.41
RPL39P62891 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPL39P62891 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPL39P62891 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPL39P62891 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPL39P62891 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.61■□□□□ 0.41
RPL39P62891 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.61■□□□□ 0.41
RPL39P62891 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPL39P62891 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPL39P62891 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPL39P62891 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.6■□□□□ 0.41
RPL39P62891 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC17.6■□□□□ 0.41
RPL39P62891 AC018358.1-201ENST00000631079 1402 ntBASIC17.6■□□□□ 0.41
RPL39P62891 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RPL39P62891 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPL39P62891 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPL39P62891 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPL39P62891 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPL39P62891 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPL39P62891 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPL39P62891 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPL39P62891 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.59■□□□□ 0.41
RPL39P62891 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPL39P62891 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17.59■□□□□ 0.41
RPL39P62891 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPL39P62891 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RPL39P62891 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPL39P62891 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RPL39P62891 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RPL39P62891 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.58■□□□□ 0.41
RPL39P62891 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPL39P62891 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.58■□□□□ 0.4
RPL39P62891 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.57■□□□□ 0.4
RPL39P62891 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.57■□□□□ 0.4
RPL39P62891 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPL39P62891 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPL39P62891 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RPL39P62891 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPL39P62891 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPL39P62891 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.56■□□□□ 0.4
RPL39P62891 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPL39P62891 SETD8P1-201ENST00000623146 1180 ntBASIC17.56■□□□□ 0.4
RPL39P62891 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPL39P62891 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPL39P62891 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPL39P62891 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPL39P62891 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPL39P62891 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.55■□□□□ 0.4
RPL39P62891 RARRES2P7-201ENST00000567349 469 ntBASIC17.55■□□□□ 0.4
RPL39P62891 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPL39P62891 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPL39P62891 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.54■□□□□ 0.4
RPL39P62891 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.54■□□□□ 0.4
RPL39P62891 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
RPL39P62891 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms