Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 COA2YPL189C-A 207 nt8.76□□□□□ -1.01
UFD2P54860 DTR1YBR180W 1719 nt8.76□□□□□ -1.01
UFD2P54860 YLR358CYLR358C 564 nt8.75□□□□□ -1.01
UFD2P54860 HDA1YNL021W 2121 nt8.75□□□□□ -1.01
UFD2P54860 YIL177CYIL177C 5277 nt8.74□□□□□ -1.01
UFD2P54860 ILV2YMR108W 2064 nt8.73□□□□□ -1.01
UFD2P54860 MMS21YEL019C 804 nt8.73□□□□□ -1.01
UFD2P54860 COS6YGR295C 1146 nt8.73□□□□□ -1.01
UFD2P54860 CPR2YHR057C 618 nt8.73□□□□□ -1.01
UFD2P54860 MIM1YOL026C 342 nt8.73□□□□□ -1.01
UFD2P54860 MNN9YPL050C 1188 nt8.73□□□□□ -1.01
UFD2P54860 RFC1YOR217W 2586 nt8.73□□□□□ -1.01
UFD2P54860 GTB1YDR221W 2109 nt8.72□□□□□ -1.01
UFD2P54860 RRP1YDR087C 837 nt8.72□□□□□ -1.01
UFD2P54860 DST1YGL043W 930 nt8.72□□□□□ -1.01
UFD2P54860 HBS1YKR084C 1836 nt8.71□□□□□ -1.01
UFD2P54860 LSM12YHR121W 564 nt8.71□□□□□ -1.02
UFD2P54860 ORT1YOR130C 879 nt8.71□□□□□ -1.02
UFD2P54860 GNP1YDR508C 1992 nt8.71□□□□□ -1.02
UFD2P54860 TAF4YMR005W 1167 nt8.7□□□□□ -1.02
UFD2P54860 STE3YKL178C 1413 nt8.7□□□□□ -1.02
UFD2P54860 CRN1YLR429W 1956 nt8.7□□□□□ -1.02
UFD2P54860 ELP6YMR312W 822 nt8.69□□□□□ -1.02
UFD2P54860 GAT1YFL021W 1533 nt8.69□□□□□ -1.02
UFD2P54860 MTC6YHR151C 1581 nt8.69□□□□□ -1.02
UFD2P54860 KTR4YBR199W 1395 nt8.68□□□□□ -1.02
UFD2P54860 SDH8YBR269C 417 nt8.67□□□□□ -1.02
UFD2P54860 YNL295WYNL295W 1575 nt8.66□□□□□ -1.02
UFD2P54860 HOG1YLR113W 1308 nt8.66□□□□□ -1.02
UFD2P54860 RRP43YCR035C 1185 nt8.66□□□□□ -1.02
UFD2P54860 YER147C-AYER147C-A 411 nt8.66□□□□□ -1.02
UFD2P54860 ERV2YPR037C 591 nt8.66□□□□□ -1.02
UFD2P54860 PRE2YPR103W 864 nt8.66□□□□□ -1.02
UFD2P54860 MRPL36YBR122C 534 nt8.66□□□□□ -1.02
UFD2P54860 TES1YJR019C 1050 nt8.65□□□□□ -1.02
UFD2P54860 YMR306C-AYMR306C-A 390 nt8.65□□□□□ -1.02
UFD2P54860 DUR3YHL016C 2208 nt8.65□□□□□ -1.03
UFD2P54860 YPL247CYPL247C 1572 nt8.65□□□□□ -1.03
UFD2P54860 YNL234WYNL234W 1281 nt8.64□□□□□ -1.03
UFD2P54860 FIT1YDR534C 1587 nt8.64□□□□□ -1.03
UFD2P54860 UFD1YGR048W 1086 nt8.63□□□□□ -1.03
UFD2P54860 AOS1YPR180W 1044 nt8.63□□□□□ -1.03
UFD2P54860 NUP57YGR119C 1626 nt8.62□□□□□ -1.03
UFD2P54860 YDR509WYDR509W 348 nt8.62□□□□□ -1.03
UFD2P54860 PIH1YHR034C 1035 nt8.62□□□□□ -1.03
UFD2P54860 HAM1YJR069C 594 nt8.62□□□□□ -1.03
UFD2P54860 YJR142WYJR142W 1029 nt8.62□□□□□ -1.03
UFD2P54860 YML034C-AYML034C-A 399 nt8.62□□□□□ -1.03
UFD2P54860 RPR1RPR1 369 nt8.62□□□□□ -1.03
UFD2P54860 INP54YOL065C 1155 nt8.62□□□□□ -1.03
UFD2P54860 PSA1YDL055C 1086 nt8.61□□□□□ -1.03
UFD2P54860 MPC1YGL080W 393 nt8.61□□□□□ -1.03
UFD2P54860 DOC1YGL240W 753 nt8.61□□□□□ -1.03
UFD2P54860 STS1YIR011C 960 nt8.61□□□□□ -1.03
UFD2P54860 CDA1YLR307W 906 nt8.61□□□□□ -1.03
UFD2P54860 snR4snR4 186 nt8.61□□□□□ -1.03
UFD2P54860 YKR023WYKR023W 1593 nt8.61□□□□□ -1.03
UFD2P54860 YCR099CYCR099C 468 nt8.6□□□□□ -1.03
UFD2P54860 NMA2YGR010W 1188 nt8.6□□□□□ -1.03
UFD2P54860 YML079WYML079W 606 nt8.6□□□□□ -1.03
UFD2P54860 ATP23YNR020C 813 nt8.6□□□□□ -1.03
UFD2P54860 DSE3YOR264W 1293 nt8.6□□□□□ -1.03
UFD2P54860 SPS1YDR523C 1473 nt8.59□□□□□ -1.03
UFD2P54860 CTR1YPR124W 1221 nt8.59□□□□□ -1.03
UFD2P54860 TPO1YLL028W 1761 nt8.58□□□□□ -1.04
UFD2P54860 DIA4YHR011W 1341 nt8.58□□□□□ -1.04
UFD2P54860 PUP2YGR253C 783 nt8.58□□□□□ -1.04
UFD2P54860 MSI1YBR195C 1269 nt8.58□□□□□ -1.04
UFD2P54860 YHR033WYHR033W 1272 nt8.57□□□□□ -1.04
UFD2P54860 MIX17YMR002W 471 nt8.56□□□□□ -1.04
UFD2P54860 RPL2AYFR031C-A 765 nt8.55□□□□□ -1.04
UFD2P54860 YGL081WYGL081W 963 nt8.55□□□□□ -1.04
UFD2P54860 LYS12YIL094C 1116 nt8.55□□□□□ -1.04
UFD2P54860 ADH6YMR318C 1083 nt8.55□□□□□ -1.04
UFD2P54860 NDJ1YOL104C 1059 nt8.55□□□□□ -1.04
UFD2P54860 HRB1YNL004W 1365 nt8.55□□□□□ -1.04
UFD2P54860 MRPL24YMR193W 777 nt8.54□□□□□ -1.04
UFD2P54860 DUS3YLR401C 2007 nt8.54□□□□□ -1.04
UFD2P54860 SUA5YGL169W 1281 nt8.53□□□□□ -1.04
UFD2P54860 ORM1YGR038W 669 nt8.53□□□□□ -1.04
UFD2P54860 ERV25YML012W 636 nt8.53□□□□□ -1.04
UFD2P54860 SLD7YOR060C 774 nt8.53□□□□□ -1.04
UFD2P54860 OSM1YJR051W 1506 nt8.53□□□□□ -1.04
UFD2P54860 PPZ2YDR436W 2133 nt8.53□□□□□ -1.04
UFD2P54860 CDC3YLR314C 1563 nt8.52□□□□□ -1.04
UFD2P54860 UME1YPL139C 1383 nt8.52□□□□□ -1.05
UFD2P54860 PMT1YDL095W 2454 nt8.52□□□□□ -1.05
UFD2P54860 YPC1YBR183W 951 nt8.52□□□□□ -1.05
UFD2P54860 YIL092WYIL092W 1902 nt8.52□□□□□ -1.05
UFD2P54860 YNL040WYNL040W 1371 nt8.51□□□□□ -1.05
UFD2P54860 LPD1YFL018C 1500 nt8.51□□□□□ -1.05
UFD2P54860 SLM3YDL033C 1254 nt8.51□□□□□ -1.05
UFD2P54860 YPT10YBR264C 600 nt8.51□□□□□ -1.05
UFD2P54860 MAS2YHR024C 1449 nt8.51□□□□□ -1.05
UFD2P54860 ATG23YLR431C 1362 nt8.5□□□□□ -1.05
UFD2P54860 AVL9YLR114C 2295 nt8.5□□□□□ -1.05
UFD2P54860 YDR215CYDR215C 414 nt8.5□□□□□ -1.05
UFD2P54860 GAL2YLR081W 1725 nt8.5□□□□□ -1.05
UFD2P54860 DSC3YOR223W 879 nt8.5□□□□□ -1.05
UFD2P54860 CKI1YLR133W 1749 nt8.49□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 25.2 ms