Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.258e-7■■■■■ 30.1
NCBP2P52298 PPIA-207ENST00000481437 570 ntTSL 25.57□□□□□ -1.528e-7■■■■■ 30.1
NCBP2P52298 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.39□□□□□ -1.558e-7■■■■■ 30.1
NCBP2P52298 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.6■□□□□ 0.894e-10■■■■■ 30.1
NCBP2P52298 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.884e-10■■■■■ 30.1
NCBP2P52298 TMEM165-205ENST00000508404 1657 ntTSL 220.45■□□□□ 0.864e-10■■■■■ 30.1
NCBP2P52298 ADAR-206ENST00000494866 471 ntTSL 213.24□□□□□ -0.295e-31■■■■■ 30
NCBP2P52298 ADAR-204ENST00000471068 577 ntTSL 410.92□□□□□ -0.665e-31■■■■■ 30
NCBP2P52298 ADAR-201ENST00000368471 6515 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.815e-31■■■■■ 30
NCBP2P52298 ADAR-203ENST00000463920 2347 ntTSL 28.07□□□□□ -1.125e-31■■■■■ 30
NCBP2P52298 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.79■□□□□ 0.927e-8■■■■■ 30
NCBP2P52298 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.527e-8■■■■■ 30
NCBP2P52298 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.517e-8■■■■■ 30
NCBP2P52298 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.287e-8■■■■■ 30
NCBP2P52298 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.387e-8■■■■■ 30
NCBP2P52298 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC11.88□□□□□ -0.517e-8■■■■■ 30
NCBP2P52298 HIGD1A-205ENST00000470543 983 ntTSL 211.09□□□□□ -0.637e-8■■■■■ 30
NCBP2P52298 PRKD3-203ENST00000443187 695 ntTSL 410.25□□□□□ -0.772e-9■■■■■ 30
NCBP2P52298 AC099329.1-201ENST00000625589 539 ntTSL 54.67□□□□□ -1.667e-8■■■■■ 30
NCBP2P52298 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.731e-7■■■■■ 30
NCBP2P52298 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.831e-7■■■■■ 30
NCBP2P52298 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.09■■□□□ 1.132e-8■■■■■ 30
NCBP2P52298 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.07■□□□□ 0.82e-8■■■■■ 30
NCBP2P52298 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.692e-8■■■■■ 30
NCBP2P52298 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.622e-8■■■■■ 30
NCBP2P52298 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.452e-8■■■■■ 30
NCBP2P52298 SCRN2-208ENST00000581645 1477 ntTSL 517.76■□□□□ 0.432e-8■■■■■ 30
NCBP2P52298 SCRN2-205ENST00000579856 952 ntTSL 516.31■□□□□ 0.22e-8■■■■■ 30
NCBP2P52298 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.22■□□□□ 0.192e-8■■■■■ 30
NCBP2P52298 SCRN2-203ENST00000578323 624 ntTSL 514.01□□□□□ -0.172e-8■■■■■ 30
NCBP2P52298 SCRN2-207ENST00000581546 1237 ntTSL 1 (best)14□□□□□ -0.172e-8■■■■■ 30
NCBP2P52298 SCRN2-204ENST00000578840 912 ntTSL 313.4□□□□□ -0.262e-8■■■■■ 30
NCBP2P52298 SCRN2-206ENST00000580428 717 ntTSL 213.03□□□□□ -0.322e-8■■■■■ 30
NCBP2P52298 SF3B6-201ENST00000233468 770 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.732e-8■■■■■ 30
NCBP2P52298 PPP1R3C-201ENST00000238994 2524 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.812e-8■■■■■ 30
NCBP2P52298 SF3B6-202ENST00000478050 720 ntTSL 24.62□□□□□ -1.672e-8■■■■■ 30
NCBP2P52298 CIZ1-211ENST00000467178 904 ntTSL 320.6■□□□□ 0.894e-7■■■■■ 29.9
NCBP2P52298 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.764e-7■■■■■ 29.9
NCBP2P52298 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.754e-7■■■■■ 29.9
NCBP2P52298 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.714e-7■■■■■ 29.9
NCBP2P52298 CIZ1-221ENST00000488559 952 ntTSL 518.44■□□□□ 0.544e-7■■■■■ 29.9
NCBP2P52298 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.374e-7■■■■■ 29.9
NCBP2P52298 CIZ1-218ENST00000476727 1205 ntTSL 515.98■□□□□ 0.154e-7■■■■■ 29.9
NCBP2P52298 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.484e-7■■■■■ 29.9
NCBP2P52298 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.534e-7■■■■■ 29.9
NCBP2P52298 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.734e-7■■■■■ 29.9
NCBP2P52298 CIZ1-202ENST00000324544 809 ntTSL 39.54□□□□□ -0.884e-7■■■■■ 29.9
NCBP2P52298 CAP2-204ENST00000476263 891 ntTSL 511.2□□□□□ -0.626e-8■■■■■ 29.9
NCBP2P52298 MOB1A-202ENST00000463975 1799 ntTSL 215.6■□□□□ 0.092e-15■■■■■ 29.9
NCBP2P52298 MOB1A-203ENST00000488006 482 ntTSL 314.3□□□□□ -0.122e-15■■■■■ 29.9
NCBP2P52298 MOB1A-206ENST00000497054 784 ntTSL 212.21□□□□□ -0.452e-15■■■■■ 29.9
NCBP2P52298 MOB1A-201ENST00000396049 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.622e-15■■■■■ 29.9
NCBP2P52298 MOB1A-204ENST00000494600 493 ntTSL 29.58□□□□□ -0.882e-15■■■■■ 29.9
NCBP2P52298 EP400-202ENST00000332482 2588 ntTSL 1 (best)18.55■□□□□ 0.562e-6■■■■■ 29.8
NCBP2P52298 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.442e-6■■■■■ 29.8
NCBP2P52298 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.262e-6■■■■■ 29.8
NCBP2P52298 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.182e-6■■■■■ 29.8
NCBP2P52298 PFKL-209ENST00000495274 951 ntTSL 215.23■□□□□ 0.032e-6■■■■■ 29.8
NCBP2P52298 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.45□□□□□ -0.12e-6■■■■■ 29.8
NCBP2P52298 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)13.51□□□□□ -0.259e-7■■■■■ 29.8
NCBP2P52298 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.342e-6■■■■■ 29.8
NCBP2P52298 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.372e-6■■■■■ 29.8
NCBP2P52298 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.42e-6■■■■■ 29.8
NCBP2P52298 USP20-207ENST00000491731 821 ntTSL 212.16□□□□□ -0.462e-6■■■■■ 29.8
NCBP2P52298 BRD4-210ENST00000601941 604 ntTSL 511.65□□□□□ -0.549e-7■■■■■ 29.8
NCBP2P52298 USP20-205ENST00000474895 825 ntTSL 511.58□□□□□ -0.562e-6■■■■■ 29.8
NCBP2P52298 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.592e-6■■■■■ 29.8
NCBP2P52298 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.982e-6■■■■■ 29.8
NCBP2P52298 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.032e-6■■■■■ 29.8
NCBP2P52298 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.39■□□□□ 0.052e-8■■■■■ 29.8
NCBP2P52298 ZNF655-220ENST00000488751 924 ntTSL 313.79□□□□□ -0.21e-19■■■■■ 29.8
NCBP2P52298 ZNF655-209ENST00000422422 782 ntTSL 311.36□□□□□ -0.591e-19■■■■■ 29.8
NCBP2P52298 AATK-202ENST00000374792 4938 ntTSL 219.13■□□□□ 0.657e-7■■■■■ 29.7
NCBP2P52298 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.267e-7■■■■■ 29.7
NCBP2P52298 AATK-206ENST00000572798 407 ntTSL 211.84□□□□□ -0.517e-7■■■■■ 29.7
NCBP2P52298 CDK5RAP2-214ENST00000481266 970 ntTSL 518.16■□□□□ 0.53e-29■■■■■ 29.6
NCBP2P52298 CDK5RAP2-212ENST00000480112 5826 ntTSL 1 (best)12.5□□□□□ -0.413e-29■■■■■ 29.6
NCBP2P52298 CDK5RAP2-209ENST00000473282 5956 ntTSL 1 (best)7.5□□□□□ -1.213e-29■■■■■ 29.6
NCBP2P52298 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.552e-10■■■■■ 29.6
NCBP2P52298 TLN2-210ENST00000561322 249 ntTSL 522.46■■□□□ 1.191e-8■■■■■ 29.5
NCBP2P52298 SMAP2-202ENST00000372718 2939 ntAPPRIS P1 TSL 1 (best)16.78■□□□□ 0.281e-8■■■■■ 29.5
NCBP2P52298 GGA3-220ENST00000613421 5156 ntTSL 213.42□□□□□ -0.264e-7■■■■■ 29.5
NCBP2P52298 GGA3-215ENST00000582821 1018 ntTSL 212.83□□□□□ -0.364e-7■■■■■ 29.5
NCBP2P52298 GGA3-203ENST00000577435 547 ntTSL 412.83□□□□□ -0.364e-7■■■■■ 29.5
NCBP2P52298 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.67□□□□□ -0.384e-7■■■■■ 29.5
NCBP2P52298 GGA3-208ENST00000579743 560 ntTSL 412.47□□□□□ -0.414e-7■■■■■ 29.5
NCBP2P52298 GGA3-205ENST00000578348 2251 ntTSL 2 BASIC10.7□□□□□ -0.74e-7■■■■■ 29.5
NCBP2P52298 GGA3-213ENST00000582486 2319 ntTSL 5 BASIC10.59□□□□□ -0.714e-7■■■■■ 29.5
NCBP2P52298 GGA3-201ENST00000537686 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.844e-7■■■■■ 29.5
NCBP2P52298 GGA3-210ENST00000580799 521 ntTSL 59.22□□□□□ -0.934e-7■■■■■ 29.5
NCBP2P52298 GGA3-223ENST00000621870 4034 ntTSL 1 (best)9.02□□□□□ -0.974e-7■■■■■ 29.5
NCBP2P52298 GGA3-222ENST00000621217 4181 ntTSL 28.65□□□□□ -1.024e-7■■■■■ 29.5
NCBP2P52298 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.3□□□□□ -1.084e-7■■■■■ 29.5
NCBP2P52298 GGA3-212ENST00000582376 551 ntTSL 47.92□□□□□ -1.144e-7■■■■■ 29.5
NCBP2P52298 GGA3-218ENST00000584243 646 ntTSL 37.48□□□□□ -1.214e-7■■■■■ 29.5
NCBP2P52298 SMAP2-203ENST00000435168 666 ntTSL 56.44□□□□□ -1.381e-8■■■■■ 29.5
NCBP2P52298 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.452e-8■■■■■ 29.3
NCBP2P52298 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.75■■□□□ 1.072e-8■■■■■ 29.3
NCBP2P52298 GAK-207ENST00000505819 1326 ntTSL 519.6■□□□□ 0.732e-8■■■■■ 29.3
NCBP2P52298 GAK-219ENST00000512325 577 ntTSL 319.2■□□□□ 0.662e-8■■■■■ 29.3
Retrieved 100 of 18,329 protein–RNA pairs in 419.3 ms