RNA–Protein interactions for RNA: ENST00000580428.1

SCRN2-206, Transcript of secernin 2, humanhuman

TSL 2

Gene SCRN2, Length 717 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN2-206ENST00000580428 NISCHQ9Y2I1 1504 aa34.09■■■■□ 3.05
SCRN2-206ENST00000580428 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
SCRN2-206ENST00000580428 ABCC9O60706 1549 aa29.7■■■□□ 2.34
SCRN2-206ENST00000580428 DCAF8L2P0C7V8 631 aa28.58■■■□□ 2.17
SCRN2-206ENST00000580428 RB1CC1Q8TDY2 1594 aa28.53■■■□□ 2.16
SCRN2-206ENST00000580428 NACADO15069 1562 aa28.47■■■□□ 2.15
SCRN2-206ENST00000580428 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
SCRN2-206ENST00000580428 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
SCRN2-206ENST00000580428 DCAF1Q9Y4B6 1507 aa28.16■■■□□ 2.1
SCRN2-206ENST00000580428 UNC13AQ9UPW8 1703 aa27.88■■■□□ 2.05
SCRN2-206ENST00000580428 PABPN1Q86U42 306 aaKnown RBP eCLIP27.76■■■□□ 2.03
SCRN2-206ENST00000580428 SCRIBQ14160 1630 aa27.72■■■□□ 2.03
SCRN2-206ENST00000580428 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.01
SCRN2-206ENST00000580428 SHROOM4Q9ULL8 1493 aa27.32■■□□□ 1.96
SCRN2-206ENST00000580428 DNAJC5BQ9UF47 199 aa27.19■■□□□ 1.94
SCRN2-206ENST00000580428 EIF4G1Q04637 1599 aaKnown RBP26.94■■□□□ 1.9
SCRN2-206ENST00000580428 CC2D2AQ9P2K1 1620 aa26.83■■□□□ 1.89
SCRN2-206ENST00000580428 CECR2Q9BXF3 1484 aa26.66■■□□□ 1.86
SCRN2-206ENST00000580428 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
SCRN2-206ENST00000580428 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
SCRN2-206ENST00000580428 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
SCRN2-206ENST00000580428 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
SCRN2-206ENST00000580428 SMARCA2P51531 1590 aa26.28■■□□□ 1.8
SCRN2-206ENST00000580428 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
SCRN2-206ENST00000580428 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
SCRN2-206ENST00000580428 HMGXB3Q12766 1538 aa26.15■■□□□ 1.78
SCRN2-206ENST00000580428 BAZ1BQ9UIG0 1483 aaKnown RBP26.12■■□□□ 1.77
SCRN2-206ENST00000580428 WIZO95785 1651 aa26.03■■□□□ 1.76
SCRN2-206ENST00000580428 RSF1Q96T23 1441 aaPredicted RBP25.98■■□□□ 1.75
SCRN2-206ENST00000580428 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
SCRN2-206ENST00000580428 NESP48681 1621 aa25.69■■□□□ 1.7
SCRN2-206ENST00000580428 ERCC6Q03468 1493 aa25.61■■□□□ 1.69
SCRN2-206ENST00000580428 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
SCRN2-206ENST00000580428 CADPSQ9ULU8 1353 aa25.52■■□□□ 1.68
SCRN2-206ENST00000580428 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
SCRN2-206ENST00000580428 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
SCRN2-206ENST00000580428 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
SCRN2-206ENST00000580428 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.65
SCRN2-206ENST00000580428 CFTRP13569 1480 aa25.36■■□□□ 1.65
SCRN2-206ENST00000580428 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
SCRN2-206ENST00000580428 CUX2O14529 1486 aa25.27■■□□□ 1.64
SCRN2-206ENST00000580428 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
SCRN2-206ENST00000580428 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
SCRN2-206ENST00000580428 PRDM2Q13029 1718 aa25.2■■□□□ 1.62
SCRN2-206ENST00000580428 MRC2Q9UBG0 1479 aa25.18■■□□□ 1.62
SCRN2-206ENST00000580428 WDR62O43379 1518 aa25.08■■□□□ 1.61
SCRN2-206ENST00000580428 URB2Q14146 1524 aaKnown RBP24.99■■□□□ 1.59
SCRN2-206ENST00000580428 TOPBP1Q92547 1522 aa24.85■■□□□ 1.57
SCRN2-206ENST00000580428 DNMBPQ6XZF7 1577 aa24.82■■□□□ 1.56
SCRN2-206ENST00000580428 ABCC8Q09428 1581 aa24.81■■□□□ 1.56
SCRN2-206ENST00000580428 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
SCRN2-206ENST00000580428 CUX1P39880 1505 aa24.66■■□□□ 1.54
SCRN2-206ENST00000580428 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.53
SCRN2-206ENST00000580428 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
SCRN2-206ENST00000580428 ZNF608Q9ULD9 1512 aaPredicted RBP24.59■■□□□ 1.53
SCRN2-206ENST00000580428 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
SCRN2-206ENST00000580428 RAD54L2Q9Y4B4 1467 aa24.55■■□□□ 1.52
SCRN2-206ENST00000580428 SOGA1O94964 1423 aa24.53■■□□□ 1.52
SCRN2-206ENST00000580428 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
SCRN2-206ENST00000580428 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
SCRN2-206ENST00000580428 SYNJ1O43426 1573 aa24.47■■□□□ 1.51
SCRN2-206ENST00000580428 DNAJC5Q9H3Z4 198 aa24.46■■□□□ 1.51
SCRN2-206ENST00000580428 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.516e-6■■■■□ 25.1
SCRN2-206ENST00000580428 TOP2BQ02880 1626 aa24.45■■□□□ 1.5
SCRN2-206ENST00000580428 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
SCRN2-206ENST00000580428 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
SCRN2-206ENST00000580428 WDR97A6NE52 1622 aa24.36■■□□□ 1.49
SCRN2-206ENST00000580428 ABCA10Q8WWZ4 1543 aa24.33■■□□□ 1.49
SCRN2-206ENST00000580428 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
SCRN2-206ENST00000580428 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
SCRN2-206ENST00000580428 OSCARQ8IYS5 282 aa24.24■■□□□ 1.47
SCRN2-206ENST00000580428 SNAPC4Q5SXM2 1469 aa24.24■■□□□ 1.47
SCRN2-206ENST00000580428 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
SCRN2-206ENST00000580428 PBRM1Q86U86 1689 aa24.22■■□□□ 1.47
SCRN2-206ENST00000580428 FBLN2P98095 1184 aa24.21■■□□□ 1.47
SCRN2-206ENST00000580428 CHD1O14646 1710 aa24.19■■□□□ 1.46
SCRN2-206ENST00000580428 MAGI1Q96QZ7 1491 aaPredicted RBP24.17■■□□□ 1.46
SCRN2-206ENST00000580428 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
SCRN2-206ENST00000580428 SYNJ2O15056 1496 aa24.08■■□□□ 1.45
SCRN2-206ENST00000580428 ERICH3Q5RHP9 1530 aa24.04■■□□□ 1.44
SCRN2-206ENST00000580428 ADAMTS12P58397 1594 aa24.03■■□□□ 1.44
SCRN2-206ENST00000580428 KIF27Q86VH2 1401 aa24.01■■□□□ 1.43
SCRN2-206ENST00000580428 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
SCRN2-206ENST00000580428 FHAD1B1AJZ9 1412 aa23.97■■□□□ 1.43
SCRN2-206ENST00000580428 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
SCRN2-206ENST00000580428 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
SCRN2-206ENST00000580428 IGF1RP08069 1367 aa23.88■■□□□ 1.41
SCRN2-206ENST00000580428 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
SCRN2-206ENST00000580428 RIMBP3CA6NJZ7 1639 aa23.86■■□□□ 1.41
SCRN2-206ENST00000580428 RIMBP3BA6NNM3 1639 aa23.86■■□□□ 1.41
SCRN2-206ENST00000580428 RIMBP3Q9UFD9 1639 aa23.86■■□□□ 1.41
SCRN2-206ENST00000580428 CUL7Q14999 1698 aa23.84■■□□□ 1.41
SCRN2-206ENST00000580428 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
SCRN2-206ENST00000580428 NUP160Q12769 1436 aa23.81■■□□□ 1.4
SCRN2-206ENST00000580428 RUSC2Q8N2Y8 1516 aa23.8■■□□□ 1.4
SCRN2-206ENST00000580428 CARMIL1Q5VZK9 1371 aa23.77■■□□□ 1.4
SCRN2-206ENST00000580428 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
SCRN2-206ENST00000580428 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
SCRN2-206ENST00000580428 CYB5RLQ6IPT4 315 aa23.66■■□□□ 1.38
SCRN2-206ENST00000580428 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms