RNA–Protein interactions for RNA: ENST00000581546.1

SCRN2-207, Transcript of secernin 2, humanhuman

TSL 1 (best)

Gene SCRN2, Length 1,237 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN2-207ENST00000581546 NISCHQ9Y2I1 1504 aa38.24■■■■□ 3.71
SCRN2-207ENST00000581546 CCDC180Q9P1Z9 1646 aa34.3■■■■□ 3.08
SCRN2-207ENST00000581546 ABCC9O60706 1549 aa33.89■■■■□ 3.02
SCRN2-207ENST00000581546 RB1CC1Q8TDY2 1594 aa32.45■■■□□ 2.79
SCRN2-207ENST00000581546 NACADO15069 1562 aa32.3■■■□□ 2.76
SCRN2-207ENST00000581546 DCAF8L2P0C7V8 631 aa32.02■■■□□ 2.72
SCRN2-207ENST00000581546 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.71
SCRN2-207ENST00000581546 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
SCRN2-207ENST00000581546 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
SCRN2-207ENST00000581546 DCAF1Q9Y4B6 1507 aa31.65■■■□□ 2.66
SCRN2-207ENST00000581546 PABPN1Q86U42 306 aaKnown RBP eCLIP31.52■■■□□ 2.64
SCRN2-207ENST00000581546 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
SCRN2-207ENST00000581546 DNAJC5BQ9UF47 199 aa31.44■■■□□ 2.62
SCRN2-207ENST00000581546 SCRIBQ14160 1630 aa31.2■■■□□ 2.58
SCRN2-207ENST00000581546 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.57
SCRN2-207ENST00000581546 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
SCRN2-207ENST00000581546 CC2D2AQ9P2K1 1620 aa30.68■■■□□ 2.5
SCRN2-207ENST00000581546 CECR2Q9BXF3 1484 aa30.5■■■□□ 2.47
SCRN2-207ENST00000581546 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
SCRN2-207ENST00000581546 NCAPD3P42695 1498 aa29.76■■■□□ 2.35
SCRN2-207ENST00000581546 ATAD2BQ9ULI0 1458 aa29.71■■■□□ 2.35
SCRN2-207ENST00000581546 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
SCRN2-207ENST00000581546 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
SCRN2-207ENST00000581546 HMGXB3Q12766 1538 aa29.63■■■□□ 2.33
SCRN2-207ENST00000581546 PEG3Q9GZU2 1588 aa29.53■■■□□ 2.32
SCRN2-207ENST00000581546 BAZ1BQ9UIG0 1483 aaKnown RBP29.46■■■□□ 2.31
SCRN2-207ENST00000581546 MROH2BQ7Z745 1585 aa29.45■■■□□ 2.31
SCRN2-207ENST00000581546 ERCC6Q03468 1493 aa29.26■■■□□ 2.27
SCRN2-207ENST00000581546 NESP48681 1621 aa29.18■■■□□ 2.26
SCRN2-207ENST00000581546 WIZO95785 1651 aa29.15■■■□□ 2.26
SCRN2-207ENST00000581546 CUX2O14529 1486 aa29.14■■■□□ 2.26
SCRN2-207ENST00000581546 LAMC3Q9Y6N6 1575 aa29.11■■■□□ 2.25
SCRN2-207ENST00000581546 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
SCRN2-207ENST00000581546 THOC2Q8NI27 1593 aaKnown RBP28.92■■■□□ 2.22
SCRN2-207ENST00000581546 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
SCRN2-207ENST00000581546 PDS5BQ9NTI5 1447 aa28.87■■■□□ 2.21
SCRN2-207ENST00000581546 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
SCRN2-207ENST00000581546 TOP2AP11388 1531 aaKnown RBP28.81■■■□□ 2.2
SCRN2-207ENST00000581546 DNAJC5Q9H3Z4 198 aa28.7■■■□□ 2.18
SCRN2-207ENST00000581546 MRC2Q9UBG0 1479 aa28.62■■■□□ 2.17
SCRN2-207ENST00000581546 CFTRP13569 1480 aa28.6■■■□□ 2.17
SCRN2-207ENST00000581546 CEP164Q9UPV0 1460 aa28.58■■■□□ 2.17
SCRN2-207ENST00000581546 WDR62O43379 1518 aa28.58■■■□□ 2.17
SCRN2-207ENST00000581546 FANCD2Q9BXW9 1451 aa28.54■■■□□ 2.16
SCRN2-207ENST00000581546 PRDM2Q13029 1718 aa28.52■■■□□ 2.16
SCRN2-207ENST00000581546 CCDC88BA6NC98 1476 aa28.42■■■□□ 2.14
SCRN2-207ENST00000581546 URB2Q14146 1524 aaKnown RBP28.29■■■□□ 2.12
SCRN2-207ENST00000581546 TOPBP1Q92547 1522 aa28.05■■■□□ 2.08
SCRN2-207ENST00000581546 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
SCRN2-207ENST00000581546 DNMBPQ6XZF7 1577 aa28.01■■■□□ 2.07
SCRN2-207ENST00000581546 IFT140Q96RY7 1462 aa27.99■■■□□ 2.07
SCRN2-207ENST00000581546 ZNF608Q9ULD9 1512 aaPredicted RBP27.87■■■□□ 2.05
SCRN2-207ENST00000581546 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
SCRN2-207ENST00000581546 TARBP1Q13395 1621 aaKnown RBP27.81■■■□□ 2.04
SCRN2-207ENST00000581546 POLA1P09884 1462 aaPredicted RBP27.78■■■□□ 2.04
SCRN2-207ENST00000581546 SUPT5HO00267 1087 aaKnown RBP27.77■■■□□ 2.04
SCRN2-207ENST00000581546 OSCARQ8IYS5 282 aa27.76■■■□□ 2.03
SCRN2-207ENST00000581546 CUX1P39880 1505 aa27.67■■■□□ 2.02
SCRN2-207ENST00000581546 AQRO60306 1485 aaKnown RBP eCLIP27.64■■■□□ 2.026e-6■■■■□ 25.1
SCRN2-207ENST00000581546 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.02
SCRN2-207ENST00000581546 RAD54L2Q9Y4B4 1467 aa27.64■■■□□ 2.01
SCRN2-207ENST00000581546 SOGA1O94964 1423 aa27.61■■■□□ 2.01
SCRN2-207ENST00000581546 WDR97A6NE52 1622 aa27.61■■■□□ 2.01
SCRN2-207ENST00000581546 CHD1O14646 1710 aa27.59■■■□□ 2.01
SCRN2-207ENST00000581546 TRIM41Q8WV44 630 aa27.55■■■□□ 2
SCRN2-207ENST00000581546 TDRD9Q8NDG6 1382 aaKnown RBP27.49■■□□□ 1.99
SCRN2-207ENST00000581546 RIMBP3CA6NJZ7 1639 aa27.48■■□□□ 1.99
SCRN2-207ENST00000581546 RIMBP3BA6NNM3 1639 aa27.48■■□□□ 1.99
SCRN2-207ENST00000581546 RIMBP3Q9UFD9 1639 aa27.48■■□□□ 1.99
SCRN2-207ENST00000581546 SNAPC4Q5SXM2 1469 aa27.42■■□□□ 1.98
SCRN2-207ENST00000581546 ARHGEF11O15085 1522 aa27.4■■□□□ 1.98
SCRN2-207ENST00000581546 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
SCRN2-207ENST00000581546 GRIN2BQ13224 1484 aa27.38■■□□□ 1.97
SCRN2-207ENST00000581546 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
SCRN2-207ENST00000581546 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
SCRN2-207ENST00000581546 FBLN2P98095 1184 aa27.37■■□□□ 1.97
SCRN2-207ENST00000581546 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
SCRN2-207ENST00000581546 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
SCRN2-207ENST00000581546 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
SCRN2-207ENST00000581546 GAPVD1Q14C86 1478 aa27.32■■□□□ 1.96
SCRN2-207ENST00000581546 WRNQ14191 1432 aaPredicted RBP eCLIP27.29■■□□□ 1.96
SCRN2-207ENST00000581546 SYNJ1O43426 1573 aa27.29■■□□□ 1.96
SCRN2-207ENST00000581546 SYNJ2O15056 1496 aa27.26■■□□□ 1.95
SCRN2-207ENST00000581546 CLASP1Q7Z460 1538 aa27.23■■□□□ 1.95
SCRN2-207ENST00000581546 CHMP7Q8WUX9 453 aaPredicted RBP27.23■■□□□ 1.95
SCRN2-207ENST00000581546 ARAP1Q96P48 1450 aa27.13■■□□□ 1.93
SCRN2-207ENST00000581546 ADAMTS12P58397 1594 aa27.11■■□□□ 1.93
SCRN2-207ENST00000581546 CYB5RLQ6IPT4 315 aa27.08■■□□□ 1.93
SCRN2-207ENST00000581546 GRIN2AQ12879 1464 aa27.04■■□□□ 1.92
SCRN2-207ENST00000581546 ERICH3Q5RHP9 1530 aa27.04■■□□□ 1.92
SCRN2-207ENST00000581546 FHAD1B1AJZ9 1412 aa26.98■■□□□ 1.91
SCRN2-207ENST00000581546 CEP170Q5SW79 1584 aa26.95■■□□□ 1.9
SCRN2-207ENST00000581546 NUP160Q12769 1436 aa26.93■■□□□ 1.9
SCRN2-207ENST00000581546 SHROOM2Q13796 1616 aa26.84■■□□□ 1.89
SCRN2-207ENST00000581546 ERCC6L2Q5T890 1561 aa26.8■■□□□ 1.88
SCRN2-207ENST00000581546 KIF27Q86VH2 1401 aa26.76■■□□□ 1.87
SCRN2-207ENST00000581546 CUL7Q14999 1698 aa26.75■■□□□ 1.87
SCRN2-207ENST00000581546 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
SCRN2-207ENST00000581546 TRHP20396 242 aaPredicted RBP26.69■■□□□ 1.86
SCRN2-207ENST00000581546 IGF1RP08069 1367 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms