RNA–Protein interactions for RNA: ENST00000315480.8

USP20-201, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-201ENST00000315480 DCAF8L2P0C7V8 631 aa23.25■■□□□ 1.31
USP20-201ENST00000315480 NISCHQ9Y2I1 1504 aa22.43■■□□□ 1.18
USP20-201ENST00000315480 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
USP20-201ENST00000315480 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
USP20-201ENST00000315480 FAM9AQ8IZU1 332 aaPredicted RBP20.81■□□□□ 0.92
USP20-201ENST00000315480 APLP2Q06481 763 aa20.72■□□□□ 0.91
USP20-201ENST00000315480 EHMT2Q96KQ7 1210 aa20.69■□□□□ 0.9
USP20-201ENST00000315480 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
USP20-201ENST00000315480 RANGAP1P46060 587 aaPredicted RBP20.04■□□□□ 0.8
USP20-201ENST00000315480 ATP1B4Q9UN42 357 aaPredicted RBP20.02■□□□□ 0.8
USP20-201ENST00000315480 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
USP20-201ENST00000315480 TTBK1Q5TCY1 1321 aaPredicted RBP19.93■□□□□ 0.78
USP20-201ENST00000315480 PELP1Q8IZL8 1130 aaKnown RBP19.84■□□□□ 0.77
USP20-201ENST00000315480 PCGF6Q9BYE7 350 aa19.7■□□□□ 0.74
USP20-201ENST00000315480 ABCC9O60706 1549 aa19.63■□□□□ 0.73
USP20-201ENST00000315480 CCER1Q8TC90 406 aaPredicted RBP19.53■□□□□ 0.72
USP20-201ENST00000315480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.71
USP20-201ENST00000315480 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.71
USP20-201ENST00000315480 ZEB1P37275 1124 aaPredicted RBP19.51■□□□□ 0.71
USP20-201ENST00000315480 MYT1LQ9UL68 1186 aa19.47■□□□□ 0.71
USP20-201ENST00000315480 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
USP20-201ENST00000315480 CENPBP07199 599 aaPredicted RBP19.19■□□□□ 0.66
USP20-201ENST00000315480 ITGAEP38570 1179 aa19.14■□□□□ 0.65
USP20-201ENST00000315480 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.65
USP20-201ENST00000315480 MYT1Q01538 1121 aa19.12■□□□□ 0.65
USP20-201ENST00000315480 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
USP20-201ENST00000315480 TRIM26Q12899 539 aaPredicted RBP19.04■□□□□ 0.64
USP20-201ENST00000315480 NEFLP07196 543 aa18.96■□□□□ 0.63
USP20-201ENST00000315480 HRCP23327 699 aa18.96■□□□□ 0.63
USP20-201ENST00000315480 FBLN2P98095 1184 aa18.96■□□□□ 0.63
USP20-201ENST00000315480 LOC105371045A0A1W2PR82 267 aa18.94■□□□□ 0.62
USP20-201ENST00000315480 POLR3GLQ9BT43 218 aa18.88■□□□□ 0.61
USP20-201ENST00000315480 ERICH6Q7L0X2 663 aa18.81■□□□□ 0.6
USP20-201ENST00000315480 FAM50AQ14320 339 aaKnown RBP18.78■□□□□ 0.6
USP20-201ENST00000315480 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
USP20-201ENST00000315480 TRIM52Q96A61 297 aa18.69■□□□□ 0.58
USP20-201ENST00000315480 YTHDC1Q96MU7 727 aaKnown RBP18.67■□□□□ 0.58
USP20-201ENST00000315480 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
USP20-201ENST00000315480 CDK11AQ9UQ88 783 aaPredicted RBP18.61■□□□□ 0.57
USP20-201ENST00000315480 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
USP20-201ENST00000315480 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
USP20-201ENST00000315480 CNGB1Q14028 1251 aaPredicted RBP18.54■□□□□ 0.56
USP20-201ENST00000315480 P3H3Q8IVL6 736 aa18.49■□□□□ 0.55
USP20-201ENST00000315480 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
USP20-201ENST00000315480 ESF1Q9H501 851 aaKnown RBP18.45■□□□□ 0.54
USP20-201ENST00000315480 CCDC180Q9P1Z9 1646 aa18.43■□□□□ 0.54
USP20-201ENST00000315480 ARID3CA6NKF2 412 aa18.42■□□□□ 0.54
USP20-201ENST00000315480 NEUROD1Q13562 356 aa18.39■□□□□ 0.53
USP20-201ENST00000315480 BCANQ96GW7 911 aa18.38■□□□□ 0.53
USP20-201ENST00000315480 ZNF777Q9ULD5 760 aaPredicted RBP18.37■□□□□ 0.53
USP20-201ENST00000315480 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
USP20-201ENST00000315480 ZNF326Q5BKZ1 582 aaKnown RBP18.37■□□□□ 0.53
USP20-201ENST00000315480 DAXXQ9UER7 740 aaPredicted RBP18.36■□□□□ 0.53
USP20-201ENST00000315480 CHMP7Q8WUX9 453 aaPredicted RBP18.27■□□□□ 0.52
USP20-201ENST00000315480 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
USP20-201ENST00000315480 NEFMP07197 916 aa18.19■□□□□ 0.5
USP20-201ENST00000315480 NACADO15069 1562 aa18.16■□□□□ 0.5
USP20-201ENST00000315480 CLSPNQ9HAW4 1339 aa18.15■□□□□ 0.5
USP20-201ENST00000315480 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
USP20-201ENST00000315480 ANP32CO43423 234 aa18.13■□□□□ 0.49
USP20-201ENST00000315480 TSPY4P0CV99 314 aa18.11■□□□□ 0.49
USP20-201ENST00000315480 TSPY10P0CW01 314 aa18.11■□□□□ 0.49
USP20-201ENST00000315480 CHGAP10645 457 aaKnown RBP18.11■□□□□ 0.49
USP20-201ENST00000315480 ZBTB47Q9UFB7 747 aaPredicted RBP18.06■□□□□ 0.48
USP20-201ENST00000315480 SLC24A1O60721 1099 aa18.03■□□□□ 0.48
USP20-201ENST00000315480 PLPPR3Q6T4P5 718 aa18.02■□□□□ 0.47
USP20-201ENST00000315480 MTUS2Q5JR59 1369 aa17.99■□□□□ 0.47
USP20-201ENST00000315480 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
USP20-201ENST00000315480 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
USP20-201ENST00000315480 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
USP20-201ENST00000315480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.94■□□□□ 0.46
USP20-201ENST00000315480 GTF3C3Q9Y5Q9 886 aa17.93■□□□□ 0.46
USP20-201ENST00000315480 ERCC6Q03468 1493 aa17.91■□□□□ 0.46
USP20-201ENST00000315480 CHIC2Q9UKJ5 165 aa17.9■□□□□ 0.46
USP20-201ENST00000315480 ZNF316A6NFI3 1004 aaPredicted RBP17.89■□□□□ 0.45
USP20-201ENST00000315480 EEA1Q15075 1411 aa17.89■□□□□ 0.45
USP20-201ENST00000315480 CANXP27824 592 aaKnown RBP17.88■□□□□ 0.45
USP20-201ENST00000315480 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
USP20-201ENST00000315480 KCNH8Q96L42 1107 aa17.88■□□□□ 0.45
USP20-201ENST00000315480 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
USP20-201ENST00000315480 CLIP1P30622 1438 aa17.82■□□□□ 0.44
USP20-201ENST00000315480 ACIN1Q9UKV3 1341 aaKnown RBP17.82■□□□□ 0.44
USP20-201ENST00000315480 KIF27Q86VH2 1401 aa17.81■□□□□ 0.44
USP20-201ENST00000315480 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
USP20-201ENST00000315480 SCAF1Q9H7N4 1312 aaKnown RBP17.74■□□□□ 0.43
USP20-201ENST00000315480 PPP1R15AO75807 674 aaPredicted RBP17.73■□□□□ 0.43
USP20-201ENST00000315480 DCAF1Q9Y4B6 1507 aa17.73■□□□□ 0.43
USP20-201ENST00000315480 ARID4BQ4LE39 1312 aaPredicted RBP17.72■□□□□ 0.43
USP20-201ENST00000315480 CFDP1Q9UEE9 299 aaPredicted RBP17.7■□□□□ 0.42
USP20-201ENST00000315480 GOLGA3Q08378 1498 aa17.69■□□□□ 0.42
USP20-201ENST00000315480 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
USP20-201ENST00000315480 KDM2AQ9Y2K7 1162 aa17.68■□□□□ 0.42
USP20-201ENST00000315480 BCL11AQ9H165 835 aa17.65■□□□□ 0.42
USP20-201ENST00000315480 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
USP20-201ENST00000315480 RRP7BPQ9NSQ0 103 aa17.63■□□□□ 0.41
USP20-201ENST00000315480 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
USP20-201ENST00000315480 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
USP20-201ENST00000315480 CEP164Q9UPV0 1460 aa17.57■□□□□ 0.4
USP20-201ENST00000315480 TMC1Q8TDI8 760 aa17.57■□□□□ 0.4
USP20-201ENST00000315480 NPM2Q86SE8 214 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms